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Entry version 142 (19 Jan 2022)
Sequence version 1 (01 Dec 2001)
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Protein
Submitted name:

Protocadherin gamma A1

Gene

Pcdhga1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.

ARBA annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the 'Description' field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi37Calcium 1Combined sources1
Metal bindingi37Calcium 2Combined sources1
Metal bindingi38Calcium 1Combined sources1
Metal bindingi91Calcium 1Combined sources1
Metal bindingi93Calcium 1Combined sources1
Metal bindingi93Calcium 2Combined sources1
Metal bindingi125Calcium 2Combined sources1
Metal bindingi126Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi127Calcium 3Combined sources1
Metal bindingi127Calcium 4Combined sources1
Metal bindingi128Calcium 1Combined sources1
Metal bindingi128Calcium 2Combined sources1
Metal bindingi129Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi129Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi129Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi144Calcium 6Combined sources1
Metal bindingi144Calcium 7Combined sources1
Metal bindingi144Calcium 8Combined sources1
Metal bindingi159Calcium 3Combined sources1
Metal bindingi159Calcium 5Combined sources1
Metal bindingi161Calcium 2Combined sources1
Metal bindingi161Calcium 4Combined sources1
Metal bindingi161Calcium 5Combined sources1
Metal bindingi165Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi165Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi165Calcium 5; via carbonyl oxygenCombined sources1
Metal bindingi201Calcium 6Combined sources1
Metal bindingi203Calcium 6Combined sources1
Metal bindingi203Calcium 7Combined sources1
Metal bindingi203Calcium 8Combined sources1
Metal bindingi216Calcium 3Combined sources1
Metal bindingi216Calcium 4Combined sources1
Metal bindingi216Calcium 5Combined sources1
Metal bindingi234Calcium 7Combined sources1
Metal bindingi234Calcium 8Combined sources1
Metal bindingi235Calcium 7; via carbonyl oxygenCombined sources1
Metal bindingi235Calcium 8; via carbonyl oxygenCombined sources1
Metal bindingi236Calcium 10Combined sources1
Metal bindingi236Calcium 9Combined sources1
Metal bindingi237Calcium 6Combined sources1
Metal bindingi237Calcium 7Combined sources1
Metal bindingi238Calcium 10; via carbonyl oxygenCombined sources1
Metal bindingi238Calcium 9; via carbonyl oxygenCombined sources1
Metal bindingi253Calcium 11Combined sources1
Metal bindingi253Calcium 12Combined sources1
Metal bindingi268Calcium 9Combined sources1
Metal bindingi270Calcium 10Combined sources1
Metal bindingi270Calcium 7Combined sources1
Metal bindingi270Calcium 9Combined sources1
Metal bindingi274Calcium 10; via carbonyl oxygenCombined sources1
Metal bindingi274Calcium 9; via carbonyl oxygenCombined sources1
Metal bindingi308Calcium 11Combined sources1
Metal bindingi310Calcium 11Combined sources1
Metal bindingi310Calcium 12Combined sources1
Metal bindingi323Calcium 10Combined sources1
Metal bindingi323Calcium 9Combined sources1
Metal bindingi339Calcium 12Combined sources1
Metal bindingi340Calcium 12; via carbonyl oxygenCombined sources1
Metal bindingi341Calcium 13Combined sources1
Metal bindingi341Calcium 14Combined sources1
Metal bindingi342Calcium 11Combined sources1
Metal bindingi342Calcium 12Combined sources1
Metal bindingi343Calcium 13; via carbonyl oxygenCombined sources1
Metal bindingi343Calcium 14; via carbonyl oxygenCombined sources1
Metal bindingi343Calcium 15; via carbonyl oxygenCombined sources1
Metal bindingi373Calcium 13Combined sources1
Metal bindingi373Calcium 14Combined sources1
Metal bindingi373Calcium 15Combined sources1
Metal bindingi375Calcium 12Combined sources1
Metal bindingi375Calcium 13Combined sources1
Metal bindingi375Calcium 15Combined sources1
Metal bindingi379Calcium 13; via carbonyl oxygenCombined sources1
Metal bindingi379Calcium 14; via carbonyl oxygenCombined sources1
Metal bindingi379Calcium 15; via carbonyl oxygenCombined sources1
Metal bindingi426Calcium 14Combined sources1
Metal bindingi426Calcium 15Combined sources1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processCell adhesionARBA annotation
LigandCalciumPROSITE-ProRule annotationARBA annotation, Metal-bindingCombined sources

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Protocadherin gamma A1Imported
Submitted name:
Protocadherin gamma subfamily A, 1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Pcdhga1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 18

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1935212, Pcdhga1

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000103144

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei691 – 714HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 28Sequence analysisAdd BLAST28
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501509950229 – 931Sequence analysisAdd BLAST903

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi96 ↔ 102Combined sources
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi223O-linked (Man...) serineCombined sources1
Glycosylationi225O-linked (Man...) serineCombined sources1
Glycosylationi265N-linked (GlcNAc...) asparagineCombined sources1
Glycosylationi419N-linked (GlcNAc...) asparagineCombined sources1

Proteomic databases

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
338588

PTM databases

GlyConnect protein glycosylation platform

More...
GlyConnecti
2657, 1 N-Linked glycan (1 site)

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000103144, Expressed in brain and 67 other tissues

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini29 – 133CadherinInterPro annotationAdd BLAST105
Domaini134 – 242CadherinInterPro annotationAdd BLAST109
Domaini243 – 347CadherinInterPro annotationAdd BLAST105
Domaini355 – 452CadherinInterPro annotationAdd BLAST98
Domaini453 – 562CadherinInterPro annotationAdd BLAST110
Domaini579 – 683CadherinInterPro annotationAdd BLAST105

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni808 – 840DisorderedSequence analysisAdd BLAST33
Regioni901 – 931DisorderedSequence analysisAdd BLAST31

Keywords - Domaini

RepeatARBA annotation, SignalSequence analysisARBA annotation, Transmembrane, Transmembrane helixSequence analysisARBA annotation

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000164018

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_006480_3_0_1

Identification of Orthologs from Complete Genome Data

More...
OMAi
LMARTKV

Database of Orthologous Groups

More...
OrthoDBi
223098at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002126, Cadherin-like_dom
IPR015919, Cadherin-like_sf
IPR032455, Cadherin_C
IPR031904, Cadherin_CBD
IPR020894, Cadherin_CS
IPR013164, Cadherin_N
IPR030736, PCDHGA1

The PANTHER Classification System

More...
PANTHERi
PTHR24028:SF108, PTHR24028:SF108, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00028, Cadherin, 4 hits
PF08266, Cadherin_2, 1 hit
PF16492, Cadherin_C_2, 1 hit
PF15974, Cadherin_tail, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00205, CADHERIN

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00112, CA, 6 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49313, SSF49313, 6 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00232, CADHERIN_1, 2 hits
PS50268, CADHERIN_2, 6 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q91XZ0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAIPEKLTGW SLLVLVCLSL ELLLEAGAGN IRYSVPEETD KGSFVGSIAK
60 70 80 90 100
DLGLETRELM ERGIRIVSRG RSQLFSLNPR SGSLVTAGRI DREELCAQST
110 120 130 140 150
PCVVSFNILM EDEMKLLPIE VEIIDINDNT PQFQLEELEL KMSEITTPGT
160 170 180 190 200
RIPLPLGQDL DVGINSLQSY QLSANPHFSL DVQQGPEGPQ QPEMVLQRPL
210 220 230 240 250
DREKDAVHYL VLTASDGGSP IHSGTLQIHV QVVDVNDNPP AFTKAEYHVS
260 270 280 290 300
VPENVPLGTR LLKVNATDPD EGANGRVTYS FHKVDHSVVR KFQLDAYTGE
310 320 330 340 350
LSNKEPLDFE EYKVYPMEIQ AQDGAGLMAR AKVLVTVLDV NDNAPEVGIT
360 370 380 390 400
SVTNTVPENF PPGTTIALIS VHDQDADNNG HITCSIPGNL PFKLEKLVDN
410 420 430 440 450
YYRLVTERTL DREQSSRHNI TITATDQGTP PLSTQAHISL LVTDINDNPP
460 470 480 490 500
VFEQDSYSVY IPENNPRGAS IFSVKAQDAD HNENALVTYA LVEDTIQGVP
510 520 530 540 550
LSSYFSINSD TGVVYALQSF DYEQFRDLQL RVMAHDSGNP QLSSNVSLSL
560 570 580 590 600
FMIDQNDNAP EILYPVLPTD GSTGVELAPR SAEPGYLVTK VVAVDKDSGQ
610 620 630 640 650
NSWLSYRLLK ASEPGLFSVG LHTGEVRTAR ALLERDALKQ SLVVAVQDHG
660 670 680 690 700
QPPLSTTVTF TIAVADSIPD LLADLGSMGT PADPQDSDLT LYLVVAVAVV
710 720 730 740 750
SCIFLAFVIV LLVLKLRHWY SSRLLQTEAN GLTGLPASNF VGVDGVHAFL
760 770 780 790 800
QTYSREISLT ADSRKSHLIF PQPNYADTLI SHESCEKQEF LSAPQSLLED
810 820 830 840 850
KEEIFSQQAP PNTDWRFSQA QRPGTSGSQN GDETGTWPNN QFDTEMLQAM
860 870 880 890 900
ILASASEAAD GSSTLGGGAG TMGLSARYGP QFTLQHVPDY RQNVYIPGSN
910 920 930
ATLTNAAGKR DGKAPAGGNG NKKKSGKKEK K
Length:931
Mass (Da):101,367
Last modified:December 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2CEC389B55E10220
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0A6YW27A0A0A6YW27_MOUSE
Protocadherin gamma subfamily A, 1
Pcdhga1
810Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY013792 mRNA Translation: AAK26081.1

NCBI Reference Sequences

More...
RefSeqi
NP_291062.1, NM_033584.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000194190; ENSMUSP00000142062; ENSMUSG00000103144

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
93709

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:93709

UCSC genome browser

More...
UCSCi
uc008eql.1, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY013792 mRNA Translation: AAK26081.1
RefSeqiNP_291062.1, NM_033584.1

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4ZI9X-ray1.70A/B29-339[»]
5SZLX-ray4.20A/B/C/D29-447[»]
ModBaseiSearch...
SWISS-MODEL-WorkspaceiSubmit a new modelling project...
PDBe-KBiSearch...

PTM databases

GlyConnecti2657, 1 N-Linked glycan (1 site)

Proteomic databases

ProteomicsDBi338588

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
27257, 164 antibodies from 22 providers

The DNASU plasmid repository

More...
DNASUi
93709

Genome annotation databases

EnsembliENSMUST00000194190; ENSMUSP00000142062; ENSMUSG00000103144
GeneIDi93709
KEGGimmu:93709
UCSCiuc008eql.1, mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
56114
MGIiMGI:1935212, Pcdhga1
VEuPathDBiHostDB:ENSMUSG00000103144

Phylogenomic databases

GeneTreeiENSGT00940000164018
HOGENOMiCLU_006480_3_0_1
OMAiLMARTKV
OrthoDBi223098at2759

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
93709, 0 hits in 44 CRISPR screens

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000103144, Expressed in brain and 67 other tissues

Family and domain databases

InterProiView protein in InterPro
IPR002126, Cadherin-like_dom
IPR015919, Cadherin-like_sf
IPR032455, Cadherin_C
IPR031904, Cadherin_CBD
IPR020894, Cadherin_CS
IPR013164, Cadherin_N
IPR030736, PCDHGA1
PANTHERiPTHR24028:SF108, PTHR24028:SF108, 1 hit
PfamiView protein in Pfam
PF00028, Cadherin, 4 hits
PF08266, Cadherin_2, 1 hit
PF16492, Cadherin_C_2, 1 hit
PF15974, Cadherin_tail, 1 hit
PRINTSiPR00205, CADHERIN
SMARTiView protein in SMART
SM00112, CA, 6 hits
SUPFAMiSSF49313, SSF49313, 6 hits
PROSITEiView protein in PROSITE
PS00232, CADHERIN_1, 2 hits
PS50268, CADHERIN_2, 6 hits

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ91XZ0_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q91XZ0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: January 19, 2022
This is version 142 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Proteomics identificationCombined sources, Reference proteomeImported
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