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UniProtKB - Q91V64 (ISOC1_MOUSE)

Entry version 128 (02 Jun 2021)
Sequence version 1 (01 Dec 2001)
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Protein

Isochorismatase domain-containing protein 1

Gene

Isoc1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Isochorismatase domain-containing protein 1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Isoc1
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 18

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:1913557, Isoc1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002686651 – 297Isochorismatase domain-containing protein 1Add BLAST297

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei159PhosphotyrosineBy similarity1
Modified residuei278N6-succinyllysineCombined sources1

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q91V64

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q91V64

MaxQB - The MaxQuant DataBase

More...MaxQBi		Q91V64

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q91V64

PeptideAtlas

More...PeptideAtlasi		Q91V64

PRoteomics IDEntifications database

More...PRIDEi		Q91V64

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		269408

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q91V64

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q91V64

SwissPalm database of S-palmitoylation events

More...SwissPalmi		Q91V64

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000024601, Expressed in facial nucleus and 312 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q91V64, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q91V64, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		211371, 12 interactors

Protein interaction database and analysis system

More...IntActi		Q91V64, 1 interactor

Molecular INTeraction database

More...MINTi		Q91V64

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000025503

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q91V64, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q91V64

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the isochorismatase family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG4044, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00390000006753

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_047255_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q91V64

Identification of Orthologs from Complete Genome Data

More...OMAi		FSEEWGQ

Database of Orthologous Groups

More...OrthoDBi		1100720at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q91V64

TreeFam database of animal gene trees

More...TreeFami		TF313459

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		3.40.50.850, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR000868, Isochorismatase-like
IPR036380, Isochorismatase-like_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF00857, Isochorismatase, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF52499, SSF52499, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q91V64-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAAEPSVAA LAGGGVGAGA PSGGVPVLFC FSVFARPASV PHGAGYDVLI 
        60         70         80         90        100
QKFLSLYGDQ LDMHRKFVVQ LFAEEWGQYV DLPKGFAVSE RCKLRLVPLQ 
       110        120        130        140        150
IQLTTLGNLT PPSTVFFCCD MQERFRPAIK YFGDIISVGQ RLLQGARILG 
       160        170        180        190        200
IPVIITEQYP KGLGSTVQEI DLTGVKLVLP KTKFSMVLPE VEAALAEIPG 
       210        220        230        240        250
VRSVVLFGVE THVCIQQTAL ELVGRGIEVH IVADATSSRS MMDRMFALER 
       260        270        280        290 
LARTGIIVTT SEAVLLQLVA DKDHPKFKEI QNLIKASAPE SGLLSKV
Length:297
Mass (Da):32,033
Last modified:December 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i95F09A49D2EE29C2
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A494B952A0A494B952_MOUSE
Isochorismatase domain-containing p...
Isoc1
257Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti149L → F in BAE31476 (PubMed:16141072).Curated1
Sequence conflicti149L → F in BAE31848 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AY035213 mRNA Translation: AAK64607.1
AK134794 mRNA Translation: BAE22288.1
AK152763 mRNA Translation: BAE31476.1
AK153257 mRNA Translation: BAE31848.1
BC016576 mRNA Translation: AAH16576.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS29265.1

NCBI Reference Sequences

More...RefSeqi		NP_079754.2, NM_025478.3

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000025503; ENSMUSP00000025503; ENSMUSG00000024601

Database of genes from NCBI RefSeq genomes

More...GeneIDi		66307

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:66307

UCSC genome browser

More...UCSCi		uc008ezq.1, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY035213 mRNA Translation: AAK64607.1
AK134794 mRNA Translation: BAE22288.1
AK152763 mRNA Translation: BAE31476.1
AK153257 mRNA Translation: BAE31848.1
BC016576 mRNA Translation: AAH16576.1
CCDSiCCDS29265.1
RefSeqiNP_079754.2, NM_025478.3

3D structure databases

SMRiQ91V64
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi211371, 12 interactors
IntActiQ91V64, 1 interactor
MINTiQ91V64
STRINGi10090.ENSMUSP00000025503

PTM databases

iPTMnetiQ91V64
PhosphoSitePlusiQ91V64
SwissPalmiQ91V64

Proteomic databases

EPDiQ91V64
jPOSTiQ91V64
MaxQBiQ91V64
PaxDbiQ91V64
PeptideAtlasiQ91V64
PRIDEiQ91V64
ProteomicsDBi269408

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		63783, 56 antibodies

The DNASU plasmid repository

More...DNASUi		66307

Genome annotation databases

EnsembliENSMUST00000025503; ENSMUSP00000025503; ENSMUSG00000024601
GeneIDi66307
KEGGimmu:66307
UCSCiuc008ezq.1, mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		51015
MGIiMGI:1913557, Isoc1

Phylogenomic databases

eggNOGiKOG4044, Eukaryota
GeneTreeiENSGT00390000006753
HOGENOMiCLU_047255_0_0_1
InParanoidiQ91V64
OMAiFSEEWGQ
OrthoDBi1100720at2759
PhylomeDBiQ91V64
TreeFamiTF313459

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		66307, 2 hits in 53 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		Isoc1, mouse

Protein Ontology

More...PROi		PR:Q91V64
RNActiQ91V64, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000024601, Expressed in facial nucleus and 312 other tissues
ExpressionAtlasiQ91V64, baseline and differential
GenevisibleiQ91V64, MM

Family and domain databases

Gene3Di3.40.50.850, 1 hit
InterProiView protein in InterPro
IPR000868, Isochorismatase-like
IPR036380, Isochorismatase-like_sf
PfamiView protein in Pfam
PF00857, Isochorismatase, 1 hit
SUPFAMiSSF52499, SSF52499, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiISOC1_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q91V64
Secondary accession number(s): Q3U677
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: December 1, 2001
Last modified: June 2, 2021
This is version 128 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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