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Protein

Capsid protein

Gene

ORF3

Organism
Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984) (CLBV)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Capsid protein
Short name:
CP
Alternative name(s):
Coat protein
Gene namesi
ORF Names:ORF3
OrganismiCitrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984) (CLBV)
Taxonomic identifieri686981 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stageTymoviralesBetaflexiviridaeTrivirinaeCitrivirus
Virus hostiCitrus [TaxID: 2706]
Proteomesi
  • UP000006933 Componenti: Genome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Capsid protein, Helical capsid protein, Virion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004010851 – 363Capsid proteinAdd BLAST363

Structurei

3D structure databases

ProteinModelPortaliQ91QZ1
SMRiQ91QZ1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili72 – 111Sequence analysisAdd BLAST40

Keywords - Domaini

Coiled coil

Phylogenomic databases

OrthoDBiVOG090000QE

Family and domain databases

InterProiView protein in InterPro
IPR000052 Pltvir_coat
PfamiView protein in Pfam
PF00286 Flexi_CP, 1 hit
PRINTSiPR00232 POTXCARLCOAT
PROSITEiView protein in PROSITE
PS00418 POTEX_CARLAVIRUS_COAT, 1 hit

Sequencei

Sequence statusi: Complete.

Q91QZ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKITNDNAAT INYWLAIVEP FLTSDEDRNS DDIIRKFRAV VAEHGDTEEV
60 70 80 90 100
DPEVFFAIFS ILATKYGRVY SKKVEELNES LKAAILAGAE AEDLRNKLKD
110 120 130 140 150
ISQRYASQLE ITADREQQLE SLKKKGHEQP LTGSGSSEPV HAESAHAPQL
160 170 180 190 200
HVVNDLQQFY IPFNEYPSLT QSIGTSDIAN DEHLKRVQLT LKITDTKVFS
210 220 230 240 250
RTGFEFAISC GSRSTSDKDP YDGIIKISGK SHMRKDIAYA IRTSGITVRQ
260 270 280 290 300
FCAAFANLYW NFNLARNTPP ENWRKKGFTE GTKFAAFDFF YAVGSNAAIP
310 320 330 340 350
TEADGSVRLI RPPTNEENEA NSAMRYADIY EQNSKTAGHV TSSPLYNRGS
360
SYESKNKAKL LEM
Length:363
Mass (Da):40,680
Last modified:December 1, 2001 - v1
Checksum:iAF888688FE6BE597
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ318061 Genomic RNA Translation: CAC39424.1
RefSeqiNP_624335.1, NC_003877.1

Genome annotation databases

GeneIDi944477
KEGGivg:944477

Similar proteinsi

Entry informationi

Entry nameiCAPSD_CLBVS
AccessioniPrimary (citable) accession number: Q91QZ1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 2, 2010
Last sequence update: December 1, 2001
Last modified: March 15, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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