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UniProtKB - Q91PP5 (POLG_RTSVT)

Entry version 98 (02 Dec 2020)
Sequence version 1 (01 Dec 2001)
Previous versions | rss
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Protein

Genome polyprotein

Gene
N/A
Organism
Rice tungro spherical virus (strain Vt6) (RTSV) (Rice tungro spherical waikavirus)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Picornain 3C-like protease is a thiol protease that probably cleaves the polyprotein.By similarity

Miscellaneous

The Vt6 strain is a highly virulent strain.

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei2677For picornain 3C-like protease activityPROSITE-ProRule annotation1
Active sitei2714For picornain 3C-like protease activityPROSITE-ProRule annotation1
Active sitei2808For picornain 3C-like protease activityPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi1774 – 1781ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHelicase, Hydrolase, Nucleotidyltransferase, Protease, RNA-directed RNA polymerase, Thiol protease, Transferase
Biological processViral RNA replication
LigandATP-binding, Nucleotide-binding

Protein family/group databases

MEROPS protease database

More...MEROPSi		C03.024

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Genome polyprotein
Cleaved into the following 7 chains:
Putative leader protein
Capsid protein 1
Short name:
CP-1
Alternative name(s):
22.5 kDa protein
Coat protein 1
Capsid protein 2
Short name:
CP-2
Alternative name(s):
26 kDa protein
Coat protein 2
Capsid protein 3
Short name:
CP-3
Alternative name(s):
31 kDa protein
Coat protein 3
Putative helicase (EC:3.6.4.-)
Alternative name(s):
Putative NTP-binding protein
Probable picornain 3C-like protease (EC:3.4.22.-)
Short name:
3C-like protease
Probable RNA-directed RNA polymerase (EC:2.7.7.48)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRice tungro spherical virus (strain Vt6) (RTSV) (Rice tungro spherical waikavirus)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri337080 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiViruses › Riboviria › Orthornavirae › Pisuviricota › Pisoniviricetes › Picornavirales › Secoviridae › Waikavirus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section only exists in viral entries and indicates the host(s) either as a specific organism or taxonomic group of organisms that are susceptible to be infected by a virus.<p><a href='/help/virus_host' target='_top'>More...</a></p>Virus hostiOryza sativa (Rice) [TaxID: 4530]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000007184 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei1493 – 1513HelicalSequence analysisAdd BLAST21
Transmembranei1592 – 1612HelicalSequence analysisAdd BLAST21
Transmembranei2360 – 2380HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Capsid protein, Host membrane, Membrane, Virion

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology%5Fand%5Fbiotech%5Fsection">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi2763C → W: Complete loss of cleavage between 3C-like protease and RNA-directed RNA polymerase. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000411471 – 641Putative leader proteinSequence analysisAdd BLAST641
ChainiPRO_0000041148642 – 849Capsid protein 1By similarityAdd BLAST208
ChainiPRO_0000041149850 – 1052Capsid protein 2By similarityAdd BLAST203
ChainiPRO_00000411501053 – ?1367Capsid protein 3By similarityAdd BLAST315
ChainiPRO_0000041151?1368 – 2523Putative helicaseSequence analysisAdd BLAST1156
ChainiPRO_00000411522524 – ?2849Probable picornain 3C-like proteaseBy similarityAdd BLAST326
ChainiPRO_0000041153?2850 – 3471Probable RNA-directed RNA polymeraseBy similarityAdd BLAST622

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Specific enzymatic cleavages by picornain 3C-like protease in vivo yield mature proteins (By similarity). Picornain 3C-like protease is autocatalytically processed.By similarity1 Publication

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection describes interesting single amino acid sites on the sequence that are not defined in any other subsection. This subsection can be displayed in different sections ('Function', 'PTM / Processing', 'Pathology and Biotech') according to its content.<p><a href='/help/site' target='_top'>More...</a></p>Sitei641 – 642CleavageBy similarity2
Sitei849 – 850CleavageBy similarity2
Sitei1052 – 1053CleavageBy similarity2
Sitei2523 – 2524CleavageBy similarity2

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1748 – 1914SF3 helicasePROSITE-ProRule annotationAdd BLAST167
Domaini2629 – 2847Peptidase C3PROSITE-ProRule annotationAdd BLAST219
Domaini3152 – 3283RdRp catalyticPROSITE-ProRule annotationAdd BLAST132

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili513 – 603Sequence analysisAdd BLAST91

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Family and domain databases

Conserved Domains Database

More...CDDi		cd00205, rhv_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.40.10.10, 2 hits
2.60.120.20, 3 hits
3.30.70.270, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR043502, DNA/RNA_pol_sf
IPR000605, Helicase_SF3_ssDNA/RNA_vir
IPR014759, Helicase_SF3_ssRNA_vir
IPR044067, PCV_3C_PRO
IPR024387, Pept_C3G_Picornavir
IPR009003, Peptidase_S1_PA
IPR043504, Peptidase_S1_PA_chymotrypsin
IPR001676, Picornavirus_capsid
IPR043128, Rev_trsase/Diguanyl_cyclase
IPR033703, Rhv-like
IPR001205, RNA-dir_pol_C
IPR007094, RNA-dir_pol_PSvirus
IPR029053, Viral_coat
IPR024379, Waikavirus_capsid-1

Pfam protein domain database

More...Pfami		View protein in Pfam
PF12381, Peptidase_C3G, 1 hit
PF00680, RdRP_1, 1 hit
PF00073, Rhv, 1 hit
PF00910, RNA_helicase, 1 hit
PF12264, Waikav_capsid_1, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF50494, SSF50494, 1 hit
SSF56672, SSF56672, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51874, PCV_3C_PRO, 1 hit
PS50507, RDRP_SSRNA_POS, 1 hit
PS51218, SF3_HELICASE_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q91PP5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQSFLLSSKN QAKLLHAGLE FVGGVRCAHQ GWVSGKAVVF CNYCNFAHRL 
        60         70         80         90        100
YRFYTKNHCV LNKETIENLC GRSFVSLYRA GLLLDDFTID DLLGKGKYAK 
       110        120        130        140        150
GSIDNLSIPF DDCALCPNAG TRLSQTGVSH DHFVCNYVEH LFECASFSRE 
       160        170        180        190        200
TGGKFIRACS KGWHWNATCT TCGASCRFAN PRENVVIAIF MNFLRVMYDG 
       210        220        230        240        250
NKYYVSLHCD TEWIPVHPLF ARLVLMVRGF APLDNSHVIE EDEMDICGHP 
       260        270        280        290        300
SEVTYDDPSN YAFSHQHVTR GVGMGHLAFC RDANGVDRGE HKFYLHGPFD 
       310        320        330        340        350
LKMTHAMFRV FMILLNCHGY VQSEFREEHP AVKDRSLCAL LSVAGLRGVN 
       360        370        380        390        400
IACNEEFIHL HSQFHNGSFR SQRPIPMVYA EPEMYPPLEY VRLTESWVPR 
       410        420        430        440        450
GRVMIDDLPS LLSRVYAESS QPHAGEIYEE IFDEDDLFEL GDDEGTSTRG 
       460        470        480        490        500
LLDLGRRLGG LLLGATKCVK GLHAVIEWPV DVLTKEAEDL GTWLADNKKY 
       510        520        530        540        550
VSESTWSCQV CPEVQDALEK SMREQAKLNA QVIGGIKKLA TTMDSATSKL 
       560        570        580        590        600
KDSLKELERR ISVLEQGVDE TQQARITNLE NFCEDAAKAF DALRADIDAL 
       610        620        630        640        650
KKKPAQSVTP LPSPSGNSGT AGEQRPPPRR RPPVVEMSEA QAGETVIVGG 
       660        670        680        690        700
DEEQEAHQDS SVAAAGPTDE HNAMLQKIYL GSFKWKVSDG GGSILKTFSL 
       710        720        730        740        750
PSDIWAANDR MKNFLSYFQY YTCEGMTFTL TITSIGLHGG TLLVAWDALS 
       760        770        780        790        800
SATRRGIVSM IQLSNLPSMT LHASGSSIGT LTVTSPAIQH QICTSGSEGS 
       810        820        830        840        850
IANLGSLVIS VANVLCADSA SAQELNVNAW VQFDKPKLSY WTAQHTIAQS 
       860        870        880        890        900
GGFEESQDLG DLQAIIATGK WSTTSDKNLM EIIVHPTACY VSEKLIYQTN 
       910        920        930        940        950
LSVVAHMFAK WSGSMKYTFV FGASMFDRGK IMVSAVPVQF RNSKLTLSQM 
       960        970        980        990       1000
AAFPSMVCDL SVETREFTFE VPYISIGKMS LVCKDYLFDI SSYNADLVVS 
      1010       1020       1030       1040       1050
RLHVMILDPL VKTGNASNSI GFYVVAGPGK DFKLHQMCGV KSQFAHDVLT 
      1060       1070       1080       1090       1100
AQDFGRSLSC SRLLGNGFKE WCSRESLLMR IPLKNGKKRA FKYAVTPRMR 
      1110       1120       1130       1140       1150
TLPPEATSLS WLSQIFVEWR GSLTYTIHVQ SGSAIQHSYM RIWYDPNGKT 
      1160       1170       1180       1190       1200
DEKEIKFLDS AHPPAGIKVY HWDLKIGDSF RFTVPYCART EKLQIPKAYA 
      1210       1220       1230       1240       1250
STPYEWLTMY NGAVTIDLRS GADMELFVSI AGGDDFEMFE QTVPPKCGSV 
      1260       1270       1280       1290       1300
SDSYTVLSYA DDIKSVTEVP NKTTYLADEQ PTTSAPRTST VDTEEDPPTE 
      1310       1320       1330       1340       1350
GEIARTSNGT LVQYRGGAWK PMVERTPTMS KKQVGPELVA SDSHMYKCIK 
      1360       1370       1380       1390       1400
NMNKNVKILT DRQCTAKLAD IVDSTQGLVG SNSTFVEDLA VGAKQIRKFG 
      1410       1420       1430       1440       1450
ESLEVFEGSM SAAKTAELID NTHAAFSGPA DGSPISNVVQ LLLPMLSSIK 
      1460       1470       1480       1490       1500
GMSGKMESKM ASLTAMFQPC KKAITHLIER SFPYLACKGF KTDKWIWAAL 
      1510       1520       1530       1540       1550
ASILVGAALL HYYRSDLKFV KKWSVMCMII WAPLLAEKAY HLGTWIKEKF 
      1560       1570       1580       1590       1600
LKSLPRTRTI KDSCRKHSLA GAFECLASAS CAYIKDNWAK TMSSLLTILS 
      1610       1620       1630       1640       1650
VVASLVMWGK IPDDKEITSF ADKFHSIGKK GRSITNIIGG FEKITSVCKK 
      1660       1670       1680       1690       1700
WSETLVGWIV SNVSGGIPKE DLAMTAYLGF KIHDWVRETR DMALMENRFQ 
      1710       1720       1730       1740       1750
GFGGDEHLVR VRRLYGHSLK IDNALMEKQI VPDMQLSLII KECRQKCLEL 
      1760       1770       1780       1790       1800
MNESYTYKGM KQSRIDPLHV CMLGAPGVGK STIAHVVINN LLDHRGEPEV 
      1810       1820       1830       1840       1850
DRIYTRCCAD AYWSNYHQEP VILYDDLGAI KSNLRLSDYA EIMGIKTNDP 
      1860       1870       1880       1890       1900
FSVPMAAVED KGKHCTSKYV FSCTNVLNLD DTGDVVTKMA YYRRRNVLVK 
      1910       1920       1930       1940       1950
VERDPDVPKN EANPTEGLVF TVLGHDQNCQ GDPQFVVKEN WDEPFLREVD 
      1960       1970       1980       1990       2000
TEGWRFERVE YRTFLRFLCM YTDAYMYSQE QVLQGIKTFK MNPFAPEPEF 
      2010       2020       2030       2040       2050
AQAQSGEAAE CEIVEETQEI PGEAPQEVKE LAKIETAPNM DELVEAFNKL 
      2060       2070       2080       2090       2100
RVTPGHLNEI LRDGSGCYID EWAIAGPRWL SFHELLPFTC GCHHTRVCDF 
      2110       2120       2130       2140       2150
NIVYNNMCKA VRSQSVHFKY RANQAIKYAY THKLHSQCRY SIDFEKLREC 
      2160       2170       2180       2190       2200
NPLDVFVCVL SKYTADDHSF ERRCPKKMNV VRMQRPPVFE LKMRPPSDSV 
      2210       2220       2230       2240       2250
VVEDDQGQRA FEWPHLYTFL RYRAIEFKDD KGSLTVREDA SADVCPWNEF 
      2260       2270       2280       2290       2300
LKLPWLDGDQ LKSVLPAHLH RMVQARLEQV EIMEENGNYS GEMRNAIAEI 
      2310       2320       2330       2340       2350
KEYLDQDHQW VAALVLVACA VKERRKMTHD KLHRKSFNAL DRLDKWYTTT 
      2360       2370       2380       2390       2400
APKTSKKMKI LLAIGASVAV AGVAVGAVIL LQKTNLFGSK EDEEIEGEEG 
      2410       2420       2430       2440       2450
ETQASGAHES DGIVTQHLKR DIRPKMRVTY TDHHVAEAHE EKSTEKPRKP 
      2460       2470       2480       2490       2500
GNPTRKNFLG LSPGFAERGM GVTYEEHTPL KDALLDESNK VFRRKIVASV 
      2510       2520       2530       2540       2550
ESAVKQGGKA SKDSVLSQIS EWQDKVRATG VIAARQLEAS GSLKKIHNLN 
      2560       2570       2580       2590       2600
SRRTSSHVMP GLVVHDGTFE RSDEVDAELH RITIDEVKSC PKMIKEGVST 
      2610       2620       2630       2640       2650
LSVKKASVGV LALQKAESQL SFPFTSRAGV DRDLSMTNLI DTHMAGMSCI 
      2660       2670       2680       2690       2700
IISELGNVFR TFGVLRLCGT YVCMPAHYLD EITSEHTLYF VCPSKITQIQ 
      2710       2720       2730       2740       2750
LERHRVCLVN GFQETVVWDL GPSVPPSRNY IDFTAKADDW KNYKATSGAL 
      2760       2770       2780       2790       2800
VMSKYLVDSM LQCVHFLDSI ELTEANVSVP TSYYEANGGI HTIISGLRYR 
      2810       2820       2830       2840       2850
VHCMPGFCGA AIMRADATCY RKIIGMHVSG LRNKCMGYAE TLTQEHLMRA 
      2860       2870       2880       2890       2900
IETLKETGLL KHIPRGAIGA GEEKLPEHSK KQSLSLEGKG NLGIVGQLPA 
      2910       2920       2930       2940       2950
QLVPTSVTKT TICKSMIHGL IGEIKTEPSV LSAWDRRLPF PPGEWDPMKD 
      2960       2970       2980       2990       3000
AVKKYGSYIL PFPTEEIQEV ENFLIKKFRR KENSRRTRNV NSLEVGINGI 
      3010       3020       3030       3040       3050
DGSDFWSPIE MKTSPGYPYI LKRPSGAQGK KYLFEELEPY PSGRPKYAMK 
      3060       3070       3080       3090       3100
DPELIENYER IKEEVTSGVK PSIMTMECLK DERRKLAKIY EKPATRTFTI 
      3110       3120       3130       3140       3150
LSPEVNILFR QYFGDFAAMV MSTRREHFSQ VGINPESMEW SDLINSLLRV 
      3160       3170       3180       3190       3200
NTKGFAGDYS KFDGIGSPAI YHSIVNVVNA WYDDGEVNAR ARHSLISSIV 
      3210       3220       3230       3240       3250
HRDGICGDLI LRYSQGMPSG FAMTVIFNSF VNYYFMALAW MSTVGSSLLS 
      3260       3270       3280       3290       3300
PQGSCKDFDT YCKIVAYGDD NVVSVHEEFL DVYNLQTVAA YLSHFGVTYT 
      3310       3320       3330       3340       3350
DGDKNPIHMS KPYEDITKMS FLKRGFERVE SSGFLWKAPL DKTSIEERLN 
      3360       3370       3380       3390       3400
WIRDCPTPVE ALEQNIESAL HEAAIHGRDY FDDLVQRLNS ALKRVMLPPT 
      3410       3420       3430       3440       3450
DISFEECQAR WWASVTGDAL RAADYSSLVR RASSGHVEFN KKYRDMFRQQ 
      3460       3470 
DLPLKEILMK SKPVALLDLE V
Length:3,471
Mass (Da):389,212
Last modified:December 1, 2001 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i82B008325F931FB3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AB064963 Genomic RNA Translation: BAB61927.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB064963 Genomic RNA Translation: BAB61927.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein family/group databases

MEROPSiC03.024

Family and domain databases

CDDicd00205, rhv_like, 1 hit
Gene3Di2.40.10.10, 2 hits
2.60.120.20, 3 hits
3.30.70.270, 1 hit
InterProiView protein in InterPro
IPR043502, DNA/RNA_pol_sf
IPR000605, Helicase_SF3_ssDNA/RNA_vir
IPR014759, Helicase_SF3_ssRNA_vir
IPR044067, PCV_3C_PRO
IPR024387, Pept_C3G_Picornavir
IPR009003, Peptidase_S1_PA
IPR043504, Peptidase_S1_PA_chymotrypsin
IPR001676, Picornavirus_capsid
IPR043128, Rev_trsase/Diguanyl_cyclase
IPR033703, Rhv-like
IPR001205, RNA-dir_pol_C
IPR007094, RNA-dir_pol_PSvirus
IPR029053, Viral_coat
IPR024379, Waikavirus_capsid-1
PfamiView protein in Pfam
PF12381, Peptidase_C3G, 1 hit
PF00680, RdRP_1, 1 hit
PF00073, Rhv, 1 hit
PF00910, RNA_helicase, 1 hit
PF12264, Waikav_capsid_1, 1 hit
SUPFAMiSSF50494, SSF50494, 1 hit
SSF56672, SSF56672, 1 hit
PROSITEiView protein in PROSITE
PS51874, PCV_3C_PRO, 1 hit
PS50507, RDRP_SSRNA_POS, 1 hit
PS51218, SF3_HELICASE_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPOLG_RTSVT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q91PP5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: December 1, 2001
Last modified: December 2, 2020
This is version 98 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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