UniProtKB - Q90YV8 (RL10A_ICTPU)
Protein
60S ribosomal protein L10a
Gene
rpl10a
Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Functioni
Component of the large ribosomal subunit.By similarity
GO - Molecular functioni
- RNA binding Source: InterPro
- structural constituent of ribosome Source: InterPro
GO - Biological processi
- translation Source: InterPro
Keywordsi
Molecular function | Ribonucleoprotein, Ribosomal protein |
Names & Taxonomyi
Protein namesi | Recommended name: 60S ribosomal protein L10a |
Gene namesi | Name:rpl10a |
Organismi | Ictalurus punctatus (Channel catfish) (Silurus punctatus) |
Taxonomic identifieri | 7998 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Siluriformes › Ictaluridae › Ictalurus |
Proteomesi |
|
Subcellular locationi
Other locations
- large ribosomal subunit Source: InterPro
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000125825 | 1 – 216 | 60S ribosomal protein L10aAdd BLAST | 216 |
Interactioni
Subunit structurei
Component of the large ribosomal subunit.
By similarityFamily & Domainsi
Sequence similaritiesi
Belongs to the universal ribosomal protein uL1 family.Curated
Phylogenomic databases
OMAi | TMAINFL |
OrthoDBi | 1172076at2759 |
Family and domain databases
CDDi | cd00403, Ribosomal_L1, 1 hit |
Gene3Di | 3.40.50.790, 1 hit |
InterProi | View protein in InterPro IPR002143, Ribosomal_L1 IPR023674, Ribosomal_L1-like IPR028364, Ribosomal_L1/biogenesis IPR016095, Ribosomal_L1_3-a/b-sand IPR023673, Ribosomal_L1_CS |
Pfami | View protein in Pfam PF00687, Ribosomal_L1, 1 hit |
PIRSFi | PIRSF002155, Ribosomal_L1, 1 hit |
SUPFAMi | SSF56808, SSF56808, 1 hit |
PROSITEi | View protein in PROSITE PS01199, RIBOSOMAL_L1, 1 hit |
i Sequence
Sequence statusi: Complete.
Q90YV8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSKVSRDTLY EAVREVQAGS ISKRRKFLET VELQISLKNY DPQKDKRFSG
60 70 80 90 100
TVRLKTTPRP KFSVCVLGDQ QHCDEAKAAE IPHMDIEALK KLNKNKKMVK
110 120 130 140 150
KLAKKYDAFL ASESLIKQIP RILGPGLNKA GKFPSLLTHN ENLNTKVDEV
160 170 180 190 200
KSTIKFQMKK VLCLAVAVGH VRMSEDELVY NIHLAVNFLV SLLKKNWQNV
210
RALYIKSSMG KPQRLY
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF401564 mRNA Translation: AAK95136.1 |
RefSeqi | NP_001187211.1, NM_001200282.1 |
Genome annotation databases
GeneIDi | 100305047 |
KEGGi | ipu:100305047 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AF401564 mRNA Translation: AAK95136.1 |
RefSeqi | NP_001187211.1, NM_001200282.1 |
3D structure databases
SMRi | Q90YV8 |
ModBasei | Search... |
Genome annotation databases
GeneIDi | 100305047 |
KEGGi | ipu:100305047 |
Organism-specific databases
CTDi | 4736 |
Phylogenomic databases
OMAi | TMAINFL |
OrthoDBi | 1172076at2759 |
Family and domain databases
CDDi | cd00403, Ribosomal_L1, 1 hit |
Gene3Di | 3.40.50.790, 1 hit |
InterProi | View protein in InterPro IPR002143, Ribosomal_L1 IPR023674, Ribosomal_L1-like IPR028364, Ribosomal_L1/biogenesis IPR016095, Ribosomal_L1_3-a/b-sand IPR023673, Ribosomal_L1_CS |
Pfami | View protein in Pfam PF00687, Ribosomal_L1, 1 hit |
PIRSFi | PIRSF002155, Ribosomal_L1, 1 hit |
SUPFAMi | SSF56808, SSF56808, 1 hit |
PROSITEi | View protein in PROSITE PS01199, RIBOSOMAL_L1, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RL10A_ICTPU | |
Accessioni | Q90YV8Primary (citable) accession number: Q90YV8 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | July 26, 2002 |
Last sequence update: | December 1, 2001 | |
Last modified: | December 2, 2020 | |
This is version 72 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Documents
- SIMILARITY comments
Index of protein domains and families - Ribosomal proteins
Ribosomal proteins families and list of entries