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Protein
Submitted name:

Transcription factor Treb5

Gene

xbp1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • hatching Source: ZFIN
  • hatching gland development Source: ZFIN
  • liver development Source: ZFIN
  • transcription by RNA polymerase II Source: ZFIN

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor Treb5Imported
Submitted name:
X-box-binding protein 1Imported
Submitted name:
X-box-binding protein 1AImported
Gene namesi
Name:xbp1Imported
Synonyms:treb5Imported, xbp1aImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 5

Organism-specific databases

ZFINiZDB-GENE-011210-2 xbp1

Expressioni

Gene expression databases

BgeeiENSDARG00000035622 Expressed in 53 organ(s), highest expression level in blastula

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini69 – 132BZIPInterPro annotationAdd BLAST64

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili80 – 135Sequence analysisAdd BLAST56

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4005 Eukaryota
ENOG410XSJI LUCA
GeneTreeiENSGT00390000017751
HOVERGENiHBG061457
KOiK09027

Family and domain databases

InterProiView protein in InterPro
IPR004827 bZIP
PfamiView protein in Pfam
PF07716 bZIP_2, 1 hit
SMARTiView protein in SMART
SM00338 BRLZ, 1 hit
PROSITEiView protein in PROSITE
PS50217 BZIP, 1 hit
PS00036 BZIP_BASIC, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q90X27-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVVVTAGTGG AHKVLLISGK QSASTGATQG GYSRSISVMI PNQASSDSDS
60 70 80 90 100
TTSGPPLRKR QRLTHLSPEE KALRRKLKNR VAAQTARDRK KAKMGELEQQ
110 120 130 140 150
VLELELENQK LHVENRLLRD KTSDLLSENE ELRQRLGLDT LETKEQVQVL
160 170 180 190 200
ESAVSDLGLV TGSSESAALR LRVPPQQVQA QQSPNLKTSP WILTALALQT
210 220 230 240 250
LSLISCLVFW TSLTPSSSSR QTFLKHRSLS RSSCWWGVQE SKYLPPHLQL
260
WGPHQLSWKP LMN
Length:263
Mass (Da):29,190
Last modified:December 1, 2001 - v1
Checksum:i52D4423DD2AD114A
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1R5F9F1R5F9_DANRE
X-box-binding protein 1
xbp1
75Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR388065 Genomic DNA No translation available.
BC066493 mRNA Translation: AAH66493.1
AY029577 mRNA Translation: AAK50535.1
AF399656 mRNA Translation: AAL67684.1
AF419326 Genomic DNA Translation: AAL75952.1
RefSeqiNP_571949.1, NM_131874.1
UniGeneiDr.76130

Genome annotation databases

EnsembliENSDART00000124467; ENSDARP00000106586; ENSDARG00000035622
GeneIDi140614
KEGGidre:140614

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR388065 Genomic DNA No translation available.
BC066493 mRNA Translation: AAH66493.1
AY029577 mRNA Translation: AAK50535.1
AF399656 mRNA Translation: AAL67684.1
AF419326 Genomic DNA Translation: AAL75952.1
RefSeqiNP_571949.1, NM_131874.1
UniGeneiDr.76130

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000124467; ENSDARP00000106586; ENSDARG00000035622
GeneIDi140614
KEGGidre:140614

Organism-specific databases

CTDi7494
ZFINiZDB-GENE-011210-2 xbp1

Phylogenomic databases

eggNOGiKOG4005 Eukaryota
ENOG410XSJI LUCA
GeneTreeiENSGT00390000017751
HOVERGENiHBG061457
KOiK09027

Gene expression databases

BgeeiENSDARG00000035622 Expressed in 53 organ(s), highest expression level in blastula

Family and domain databases

InterProiView protein in InterPro
IPR004827 bZIP
PfamiView protein in Pfam
PF07716 bZIP_2, 1 hit
SMARTiView protein in SMART
SM00338 BRLZ, 1 hit
PROSITEiView protein in PROSITE
PS50217 BZIP, 1 hit
PS00036 BZIP_BASIC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ90X27_DANRE
AccessioniPrimary (citable) accession number: Q90X27
Entry historyiIntegrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: September 12, 2018
This is version 121 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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