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Entry version 94 (11 Dec 2019)
Sequence version 1 (01 Mar 2002)
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Protein

Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 1

Gene

citG1

Organism
Salmonella typhi
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionTransferase
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
GCF_001048035:AC754_RS06155-MONOMER
GCF_001048375:AC768_RS19825-MONOMER
GCF_001079465:ADV44_RS03815-MONOMER
GCF_001088345:AEZ18_RS21110-MONOMER
GCF_001095585:AD238_RS19980-MONOMER
GCF_001104165:AE704_RS19625-MONOMER
GCF_001104885:AEZ38_RS20315-MONOMER
GCF_001106745:AE121_RS03815-MONOMER
GCF_001118185:AE086_RS19725-MONOMER
GCF_001119245:AE140_RS19625-MONOMER
GCF_001121865:AE338_RS20570-MONOMER
GCF_001127485:AE735_RS19895-MONOMER
GCF_001135805:AEG73_RS19925-MONOMER
GCF_001148125:AEN24_RS02025-MONOMER
GCF_001148305:AEN67_RS06650-MONOMER
GCF_001157245:AER93_RS19960-MONOMER
GCF_001163025:AFA50_RS20180-MONOMER
GCF_001165785:AFA97_RS19705-MONOMER
GCF_001240865:ALC23_RS20970-MONOMER
GCF_001356455:AQJ76_RS19705-MONOMER
GCF_001357935:AQL34_RS18300-MONOMER
GCF_001359015:AQL50_RS18010-MONOMER
GCF_001360555:AQK88_RS19705-MONOMER
GCF_001361075:AQM75_RS04565-MONOMER
GCF_001362095:AQO19_RS05410-MONOMER
GCF_001362135:AQN73_RS06515-MONOMER
GCF_001362175:AQN68_RS19705-MONOMER
GCF_001362195:AQN87_RS07615-MONOMER
GCF_001362335:AQN99_RS06635-MONOMER
GCF_001364695:AQQ97_RS18620-MONOMER
GCF_900185485:CDZ80_RS04195-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 1UniRule annotation (EC:2.4.2.52UniRule annotation)
Short name:
2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase 1UniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:citG1UniRule annotation
Ordered Locus Names:STY0072, t0065
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSalmonella typhi
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri90370 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002670 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome
  • UP000000541 Componenti: Chromosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002554111 – 302Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 1Add BLAST302

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
220341.16501347

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CitG/MdcB family.UniRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4108K6F Bacteria
COG1767 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000258582

KEGG Orthology (KO)

More...
KOi
K05966

Family and domain databases

HAMAP database of protein families

More...
HAMAPi
MF_00397 CitG, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002736 CitG
IPR017551 TriPribosyl-deP-CoA_syn_CitG

The PANTHER Classification System

More...
PANTHERi
PTHR30201 PTHR30201, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01874 CitG, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR03125 citrate_citG, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q8Z9M0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNVSVVTERR TPAYSSLAAG ELNGLVARAL LTEARLTPKP GLVDIRNSGA
60 70 80 90 100
HRDMDLAAFE RSTTAIAPWM EKFFIMGNNT AALAAENVLV MLRPLGMACE
110 120 130 140 150
NDMLQATNGV NTHRGAIFAF GLLSAAIGRL LARGEPLEQN RICDQVARLS
160 170 180 190 200
RNIVAHELSA RKAGKLTKSE THFQCYGLSG ARGEAESGFR TVRTQALPVF
210 220 230 240 250
NRVVQEHDDT HLALLQTLLH LMAWNDDTNL VSRGGLEGLY YVQQQAQKLL
260 270 280 290 300
WQGGVLVEGG IEAMQFLDDE LILRNLSPGG SADLLAVTWF LSHFPAGSLY

PE
Length:302
Mass (Da):32,939
Last modified:March 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8A593ED97E9F2EC8
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AL513382 Genomic DNA Translation: CAD01218.1
AE014613 Genomic DNA Translation: AAO67798.1

NCBI Reference Sequences

More...
RefSeqi
NP_454674.1, NC_003198.1
WP_001103241.1, NZ_UFRG01000003.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AAO67798; AAO67798; t0065
CAD01218; CAD01218; CAD01218

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
1246576

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
stt:t0065
sty:STY0072

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|220341.7.peg.72

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL513382 Genomic DNA Translation: CAD01218.1
AE014613 Genomic DNA Translation: AAO67798.1
RefSeqiNP_454674.1, NC_003198.1
WP_001103241.1, NZ_UFRG01000003.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi220341.16501347

Genome annotation databases

EnsemblBacteriaiAAO67798; AAO67798; t0065
CAD01218; CAD01218; CAD01218
GeneIDi1246576
KEGGistt:t0065
sty:STY0072
PATRICifig|220341.7.peg.72

Phylogenomic databases

eggNOGiENOG4108K6F Bacteria
COG1767 LUCA
HOGENOMiHOG000258582
KOiK05966

Enzyme and pathway databases

BioCyciGCF_001048035:AC754_RS06155-MONOMER
GCF_001048375:AC768_RS19825-MONOMER
GCF_001079465:ADV44_RS03815-MONOMER
GCF_001088345:AEZ18_RS21110-MONOMER
GCF_001095585:AD238_RS19980-MONOMER
GCF_001104165:AE704_RS19625-MONOMER
GCF_001104885:AEZ38_RS20315-MONOMER
GCF_001106745:AE121_RS03815-MONOMER
GCF_001118185:AE086_RS19725-MONOMER
GCF_001119245:AE140_RS19625-MONOMER
GCF_001121865:AE338_RS20570-MONOMER
GCF_001127485:AE735_RS19895-MONOMER
GCF_001135805:AEG73_RS19925-MONOMER
GCF_001148125:AEN24_RS02025-MONOMER
GCF_001148305:AEN67_RS06650-MONOMER
GCF_001157245:AER93_RS19960-MONOMER
GCF_001163025:AFA50_RS20180-MONOMER
GCF_001165785:AFA97_RS19705-MONOMER
GCF_001240865:ALC23_RS20970-MONOMER
GCF_001356455:AQJ76_RS19705-MONOMER
GCF_001357935:AQL34_RS18300-MONOMER
GCF_001359015:AQL50_RS18010-MONOMER
GCF_001360555:AQK88_RS19705-MONOMER
GCF_001361075:AQM75_RS04565-MONOMER
GCF_001362095:AQO19_RS05410-MONOMER
GCF_001362135:AQN73_RS06515-MONOMER
GCF_001362175:AQN68_RS19705-MONOMER
GCF_001362195:AQN87_RS07615-MONOMER
GCF_001362335:AQN99_RS06635-MONOMER
GCF_001364695:AQQ97_RS18620-MONOMER
GCF_900185485:CDZ80_RS04195-MONOMER

Family and domain databases

HAMAPiMF_00397 CitG, 1 hit
InterProiView protein in InterPro
IPR002736 CitG
IPR017551 TriPribosyl-deP-CoA_syn_CitG
PANTHERiPTHR30201 PTHR30201, 1 hit
PfamiView protein in Pfam
PF01874 CitG, 1 hit
TIGRFAMsiTIGR03125 citrate_citG, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCITG1_SALTI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8Z9M0
Secondary accession number(s): Q7CBV9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: March 1, 2002
Last modified: December 11, 2019
This is version 94 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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