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Entry version 114 (31 Jul 2019)
Sequence version 1 (01 Mar 2002)
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Protein
Submitted name:

Putative transketolase N-terminal section

Gene

STY2571

Organism
Salmonella typhi
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Putative transketolase N-terminal sectionImported
Submitted name:
TransketolaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:STY2571Imported, t0523Imported
ORF Names:ABP05_11440Imported, AXU46_14860Imported, E2E79_16725Imported, E2E83_16715Imported, E2F00_16730Imported, E2F08_17535Imported, E2F09_16710Imported, E2F13_15500Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSalmonella typhiImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri90370 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeSalmonella
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002670 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome
  • UP000000541 Componenti: Chromosome

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

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STRINGi
220341.16503565

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini8 – 257TRANSKETOLASE_1InterPro annotationAdd BLAST250

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
ENOG4108HHA Bacteria
COG3959 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000243880

KEGG Orthology (KO)

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KOi
K00615

Family and domain databases

Conserved Domains Database

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CDDi
cd02012 TPP_TK, 1 hit

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR029061 THDP-binding
IPR005474 Transketolase_N

Pfam protein domain database

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Pfami
View protein in Pfam
PF00456 Transketolase_N, 1 hit

Superfamily database of structural and functional annotation

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SUPFAMi
SSF52518 SSF52518, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q8Z518-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNVTEITQLA RDIRVATLKS LNHLGFGHYG GSMSVVETLA VLYGAVMKID
60 70 80 90 100
PADPDWPERD YFVLSKGHAG PALYSTLAIK GYFPREELNT LNQNGTRLPS
110 120 130 140 150
HPDRLKTHGV DATTGSLGQG ISIAGGMALS HKLARRPNRV FCIVGDGELN
160 170 180 190 200
EGQCWEAFQF IAHHRLNNLT VFIDWNKQQL DGELEEIINP FDLEGKFRAF
210 220 230 240 250
GFDVVTVKGD DIAGLLAVVQ PVPPADARPR VVILDSIKGQ GVPCLEQLTN
260 270
SHHLRLTDGM KQTLNEAIHQ LEVMHD
Length:276
Mass (Da):30,406
Last modified:March 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i81862B56EBA84B3F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
AE014613 Genomic DNA Translation: AAO68229.1
AL513382 Genomic DNA Translation: CAD07573.1
AAABXN010000014 Genomic DNA Translation: EAA5773851.1
AAAFZZ010000012 Genomic DNA Translation: EAB8597567.1
SMQE01000015 Genomic DNA Translation: TLB40326.1
SMQI01000015 Genomic DNA Translation: TLB71561.1
SMQZ01000015 Genomic DNA Translation: TLC33165.1
SMRI01000015 Genomic DNA Translation: TLC67622.1
SMRH01000016 Genomic DNA Translation: TLC71952.1
SMRM01000014 Genomic DNA Translation: TLC94612.1

NCBI Reference Sequences

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RefSeqi
NP_456883.1, NC_003198.1
WP_001103260.1, NZ_UFRG01000003.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

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EnsemblBacteriai
AAO68229; AAO68229; t0523
CAD07573; CAD07573; CAD07573
CGW27121; CGW27121; ERS248933_03567

Database of genes from NCBI RefSeq genomes

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GeneIDi
1248896

KEGG: Kyoto Encyclopedia of Genes and Genomes

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KEGGi
stt:t0523
sty:STY2571

Pathosystems Resource Integration Center (PATRIC)

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PATRICi
fig|220341.7.peg.2603

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014613 Genomic DNA Translation: AAO68229.1
AL513382 Genomic DNA Translation: CAD07573.1
AAABXN010000014 Genomic DNA Translation: EAA5773851.1
AAAFZZ010000012 Genomic DNA Translation: EAB8597567.1
SMQE01000015 Genomic DNA Translation: TLB40326.1
SMQI01000015 Genomic DNA Translation: TLB71561.1
SMQZ01000015 Genomic DNA Translation: TLC33165.1
SMRI01000015 Genomic DNA Translation: TLC67622.1
SMRH01000016 Genomic DNA Translation: TLC71952.1
SMRM01000014 Genomic DNA Translation: TLC94612.1
RefSeqiNP_456883.1, NC_003198.1
WP_001103260.1, NZ_UFRG01000003.1

3D structure databases

Database of comparative protein structure models

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ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi220341.16503565

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAO68229; AAO68229; t0523
CAD07573; CAD07573; CAD07573
CGW27121; CGW27121; ERS248933_03567
GeneIDi1248896
KEGGistt:t0523
sty:STY2571
PATRICifig|220341.7.peg.2603

Phylogenomic databases

eggNOGiENOG4108HHA Bacteria
COG3959 LUCA
HOGENOMiHOG000243880
KOiK00615

Family and domain databases

CDDicd02012 TPP_TK, 1 hit
InterProiView protein in InterPro
IPR029061 THDP-binding
IPR005474 Transketolase_N
PfamiView protein in Pfam
PF00456 Transketolase_N, 1 hit
SUPFAMiSSF52518 SSF52518, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ8Z518_SALTI
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8Z518
Secondary accession number(s): A0A0C9G3Y9, Q7CBA2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: July 31, 2019
This is version 114 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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