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Protein

Uncharacterized WD repeat-containing protein alr2800

Gene

alr2800

Organism
Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized WD repeat-containing protein alr2800
Gene namesi
Ordered Locus Names:alr2800
OrganismiNostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Taxonomic identifieri103690 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
Proteomesi
  • UP000002483 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000515141 – 1258Uncharacterized WD repeat-containing protein alr2800Add BLAST1258

Proteomic databases

PRIDEiQ8YTC2

Interactioni

Protein-protein interaction databases

STRINGi103690.alr2800

Structurei

3D structure databases

ProteinModelPortaliQ8YTC2
SMRiQ8YTC2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati55 – 93WD 1Add BLAST39
Repeati640 – 679WD 2Add BLAST40
Repeati682 – 721WD 3Add BLAST40
Repeati724 – 763WD 4Add BLAST40
Repeati766 – 807WD 5Add BLAST42
Repeati809 – 849WD 6Add BLAST41
Repeati850 – 889WD 7Add BLAST40
Repeati892 – 931WD 8Add BLAST40
Repeati934 – 975WD 9Add BLAST42
Repeati976 – 1017WD 10Add BLAST42
Repeati1019 – 1059WD 11Add BLAST41
Repeati1060 – 1101WD 12Add BLAST42
Repeati1103 – 1143WD 13Add BLAST41
Repeati1144 – 1183WD 14Add BLAST40
Repeati1186 – 1227WD 15Add BLAST42

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiENOG4105CNF Bacteria
ENOG410XP3K LUCA
HOGENOMiHOG000023052
OMAiATCDTDC
OrthoDBiPOG091H0COA

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
Gene3Di2.130.10.10, 7 hits
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR020472 G-protein_beta_WD-40_rep
IPR002182 NB-ARC
IPR027417 P-loop_NTPase
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00931 NB-ARC, 1 hit
PF00400 WD40, 14 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 14 hits
SUPFAMiSSF50978 SSF50978, 2 hits
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 9 hits
PS50082 WD_REPEATS_2, 14 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

Q8YTC2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILQSTSLFC KYINNCRYIN REIVATLKAS PQGLARIKQA RSDRGWSVDD
60 70 80 90 100
FRWLELASEI LGVCWQENGV LAAGISEGTW KRFLAGKQAI NAEAFKAYCQ
110 120 130 140 150
VLGLNWEEVQ EGGRTKERKD TGTSRQEKFL SSSHPHTDWG EAPDVSIFYG
160 170 180 190 200
RSEELDTVKR WVTQENCRLI TLLGMGGIGK TTLSVKLAQE IINSEKIYLS
210 220 230 240 250
QSPEYIIWRS LRNAPPVEDI LAELIQFLSG QQETNLSNHL QGRISLLLKN
260 270 280 290 300
LRSSRCLIIL DNAESILQAG DRNGRYRAGC EGYGQFLQCI AETSHQSCLI
310 320 330 340 350
LTSREKPQGL AKYEGDSLPV RSLPLTGLQE QEGRELFNVK GKFAASCDQW
360 370 380 390 400
QVLISRYGGN PLALKIVASS IRDFFDGDVS QFLEVSQQGT FIFDDIRDLL
410 420 430 440 450
DQQFQRLTTL EREIMYWLAI NREPVTLAEL QADFVANIPP RELLESLSSL
460 470 480 490 500
QRRSLIEKSA GGFTQQPVVM EYVSNHLIEQ VCEEMREWGL VRSRGAEEQR
510 520 530 540 550
SRGEKIHTQY KLNAALPLTA LSTPLFTTHA LIKAQAKDYV RESQISLILQ
560 570 580 590 600
PLINQLITEF GSLENISNCL VHILSRLRGK SPQETGYAGG NVLNLLHHAQ
610 620 630 640 650
VDLSGYDFSG LTVWQAYLQG VNLHDVDFAN SDLSCCVFTE TLGNILSAAF
660 670 680 690 700
SPEGQLLATC DTDCHVRVWE VKSGKLLLIC RGHSNWVRFV VFSPDGEILA
710 720 730 740 750
SCGADENVKL WSVRDGVCIK TLTGHEHEVF SVAFHPDGET LASASGDKTI
760 770 780 790 800
KLWDIQDGTC LQTLTGHTDW VRCVAFSPDG NTLASSAADH TIKLWDVSQG
810 820 830 840 850
KCLRTLKSHT GWVRSVAFSA DGQTLASGSG DRTIKIWNYH TGECLKTYIG
860 870 880 890 900
HTNSVYSIAY SPDSKILVSG SGDRTIKLWD CQTHICIKTL HGHTNEVCSV
910 920 930 940 950
AFSPDGQTLA CVSLDQSVRL WNCRTGQCLK AWYGNTDWAL PVAFSPDRQI
960 970 980 990 1000
LASGSNDKTV KLWDWQTGKY ISSLEGHTDF IYGIAFSPDS QTLASASTDS
1010 1020 1030 1040 1050
SVRLWNISTG QCFQILLEHT DWVYAVVFHP QGKIIATGSA DCTVKLWNIS
1060 1070 1080 1090 1100
TGQCLKTLSE HSDKILGMAW SPDGQLLASA SADQSVRLWD CCTGRCVGIL
1110 1120 1130 1140 1150
RGHSNRVYSA IFSPNGEIIA TCSTDQTVKI WDWQQGKCLK TLTGHTNWVF
1160 1170 1180 1190 1200
DIAFSPDGKI LASASHDQTV RIWDVNTGKC HHICIGHTHL VSSVAFSPDG
1210 1220 1230 1240 1250
EVVASGSQDQ TVRIWNVKTG ECLQILRAKR LYEGMNITGV TGLTKATIFT

LQALGALR
Length:1,258
Mass (Da):139,514
Last modified:February 11, 2002 - v1
Checksum:i45DF03B91170C451
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000019 Genomic DNA Translation: BAB74499.1
PIRiAI2155

Genome annotation databases

EnsemblBacteriaiBAB74499; BAB74499; BAB74499
KEGGiana:alr2800

Similar proteinsi

Entry informationi

Entry nameiY2800_NOSS1
AccessioniPrimary (citable) accession number: Q8YTC2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 11, 2002
Last sequence update: February 11, 2002
Last modified: May 23, 2018
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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