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Protein
Submitted name:

Bacteriorhodopsin

Gene

alr3165

Organism
Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Enzyme and pathway databases

BioCyciNSP103690:G13AZ-3197-MONOMER

Protein family/group databases

TCDBi3.E.1.1.6 the ion-translocating microbial rhodopsin (mr) family

Names & Taxonomyi

Protein namesi
Submitted name:
BacteriorhodopsinImported
Gene namesi
Ordered Locus Names:alr3165Imported
OrganismiNostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)Imported
Taxonomic identifieri103690 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesNostocaceaeNostoc
Proteomesi
  • UP000002483 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 25HelicalSequence analysisAdd BLAST20
Transmembranei37 – 56HelicalSequence analysisAdd BLAST20
Transmembranei76 – 92HelicalSequence analysisAdd BLAST17
Transmembranei99 – 117HelicalSequence analysisAdd BLAST19
Transmembranei129 – 147HelicalSequence analysisAdd BLAST19
Transmembranei168 – 193HelicalSequence analysisAdd BLAST26
Transmembranei199 – 218HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Chemistry databases

DrugBankiDB04327 Phosphatidylethanolamine

Interactioni

Protein-protein interaction databases

STRINGi103690.alr3165

Structurei

3D structure databases

ProteinModelPortaliQ8YSC4
SMRiQ8YSC4
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8YSC4

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG41061VM Bacteria
COG5524 LUCA
HOGENOMiHOG000080951
KOiK04641
OMAiQVYWARY
OrthoDBiPOG091H0QF2

Family and domain databases

InterProiView protein in InterPro
IPR001425 Arc/bac/fun_rhodopsins
IPR018229 Rhodopsin_retinal_BS
PANTHERiPTHR28286 PTHR28286, 1 hit
PfamiView protein in Pfam
PF01036 Bac_rhodopsin, 1 hit
PRINTSiPR00251 BACTRLOPSIN
SMARTiView protein in SMART
SM01021 Bac_rhodopsin, 1 hit
PROSITEiView protein in PROSITE
PS00950 BACTERIAL_OPSIN_1, 1 hit

Sequencei

Sequence statusi: Complete.

Q8YSC4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNLESLLHWI YVAGMTIGAL HFWSLSRNPR GVPQYEYLVA MFIPIWSGLA
60 70 80 90 100
YMAMAIDQGK VEAAGQIAHY ARYIDWMVTT PLLLLSLSWT AMQFIKKDWT
110 120 130 140 150
LIGFLMSTQI VVITSGLIAD LSERDWVRYL WYICGVCAFL IILWGIWNPL
160 170 180 190 200
RAKTRTQSSE LANLYDKLVT YFTVLWIGYP IVWIIGPSGF GWINQTIDTF
210 220 230 240 250
LFCLLPFFSK VGFSFLDLHG LRNLNDSRQT TGDRFAENTL QFVENITLFA
260
NSRRQQSRRR V
Length:261
Mass (Da):30,191
Last modified:March 1, 2002 - v1
Checksum:i0791240FEDE9B148
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000019 Genomic DNA Translation: BAB74864.1
PIRiAF2201
RefSeqiWP_010997316.1, NC_003272.1

Genome annotation databases

EnsemblBacteriaiBAB74864; BAB74864; BAB74864
KEGGiana:alr3165

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000019 Genomic DNA Translation: BAB74864.1
PIRiAF2201
RefSeqiWP_010997316.1, NC_003272.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XIOX-ray2.00A1-261[»]
2M3GNMR-A/B/C1-229[»]
4TL3X-ray2.30A/B1-226[»]
5UK6NMR-A/B/C1-229[»]
ProteinModelPortaliQ8YSC4
SMRiQ8YSC4
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi103690.alr3165

Chemistry databases

DrugBankiDB04327 Phosphatidylethanolamine

Protein family/group databases

TCDBi3.E.1.1.6 the ion-translocating microbial rhodopsin (mr) family

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB74864; BAB74864; BAB74864
KEGGiana:alr3165

Phylogenomic databases

eggNOGiENOG41061VM Bacteria
COG5524 LUCA
HOGENOMiHOG000080951
KOiK04641
OMAiQVYWARY
OrthoDBiPOG091H0QF2

Enzyme and pathway databases

BioCyciNSP103690:G13AZ-3197-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ8YSC4

Family and domain databases

InterProiView protein in InterPro
IPR001425 Arc/bac/fun_rhodopsins
IPR018229 Rhodopsin_retinal_BS
PANTHERiPTHR28286 PTHR28286, 1 hit
PfamiView protein in Pfam
PF01036 Bac_rhodopsin, 1 hit
PRINTSiPR00251 BACTRLOPSIN
SMARTiView protein in SMART
SM01021 Bac_rhodopsin, 1 hit
PROSITEiView protein in PROSITE
PS00950 BACTERIAL_OPSIN_1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ8YSC4_NOSS1
AccessioniPrimary (citable) accession number: Q8YSC4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: November 7, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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