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Protein

ATP synthase subunit delta

Gene

atpH

Organism
Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

F1F0 ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F1 containing the extramembraneous catalytic core and F0 containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proton translocation.UniRule annotation
This protein is part of the stalk that links CF0 to CF1. It either transmits conformational changes from CF0 to CF1 or is implicated in proton conduction.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processATP synthesis, Hydrogen ion transport, Ion transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
ATP synthase subunit deltaUniRule annotation
Alternative name(s):
ATP synthase F(1) sector subunit deltaUniRule annotation
F-type ATPase subunit deltaUniRule annotation
Short name:
F-ATPase subunit deltaUniRule annotation
Gene namesi
Name:atpHUniRule annotation
Ordered Locus Names:BMEI0248
OrganismiBrucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)
Taxonomic identifieri224914 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000000419 Componenti: Chromosome I

Subcellular locationi

  • Cell inner membrane UniRule annotation; Peripheral membrane protein UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, CF(1), Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001846611 – 186ATP synthase subunit deltaAdd BLAST186

Interactioni

Subunit structurei

F-type ATPases have 2 components, F1 - the catalytic core - and F0 - the membrane proton channel. F1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. F0 has three main subunits: a1, b2 and c(10-14). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. F1 is attached to F0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains.UniRule annotation

Protein-protein interaction databases

STRINGi224914.BAWG_2923

Structurei

3D structure databases

ProteinModelPortaliQ8YJ38
SMRiQ8YJ38
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATPase delta chain family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105E3N Bacteria
COG0712 LUCA
HOGENOMiHOG000075825
KOiK02113
OMAiMVDNIQD

Family and domain databases

Gene3Di1.10.520.20, 1 hit
HAMAPiMF_01416 ATP_synth_delta_bact, 1 hit
InterProiView protein in InterPro
IPR026015 ATP_synth_OSCP/delta_N_sf
IPR020781 ATPase_OSCP/d_CS
IPR000711 ATPase_OSCP/dsu
PANTHERiPTHR11910 PTHR11910, 1 hit
PfamiView protein in Pfam
PF00213 OSCP, 1 hit
PRINTSiPR00125 ATPASEDELTA
SUPFAMiSSF47928 SSF47928, 1 hit
TIGRFAMsiTIGR01145 ATP_synt_delta, 1 hit
PROSITEiView protein in PROSITE
PS00389 ATPASE_DELTA, 1 hit

Sequencei

Sequence statusi: Complete.

Q8YJ38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAETSSLISG VAQRCAGSLF ELALDANSVA SVEKDLGRFE ALLSGSEDLR
60 70 80 90 100
RLISSPVFSS EDQLHAIGAI ADKAGIKGLV GNFLRVVAQN RRLFALPGII
110 120 130 140 150
AAFRQIAAEH RGEISADVVS AHELTSAQQN ELKATLKGVA GKDVTINVTV
160 170 180
DPSILGGLIV KMGSRQIDTS LRTKLSSLKL ALKEVG
Length:186
Mass (Da):19,564
Last modified:March 1, 2002 - v1
Checksum:i225806A68B4245EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE008917 Genomic DNA Translation: AAL51430.1
PIRiAC3283
RefSeqiWP_004684267.1, NZ_GG703781.1

Genome annotation databases

EnsemblBacteriaiAAL51430; AAL51430; BMEI0248
GeneIDi29593005
KEGGibme:BMEI0248
bmel:DK63_1184
PATRICifig|224914.52.peg.1251

Similar proteinsi

Entry informationi

Entry nameiATPD_BRUME
AccessioniPrimary (citable) accession number: Q8YJ38
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: March 1, 2002
Last modified: November 22, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella melitensis
    Brucella melitensis (strain 16M): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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