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Protein

Putative uncharacterized protein C11orf40

Gene

C11orf40

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein C11orf40
Alternative name(s):
Ro/SSA1-related protein
Gene namesi
Name:C11orf40
Synonyms:NOV1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 11

Organism-specific databases

EuPathDBiHostDB:ENSG00000171987.1
HGNCiHGNC:23986 C11orf40
neXtProtiNX_Q8WZ69

Pathology & Biotechi

Organism-specific databases

DisGeNETi143501
OpenTargetsiENSG00000171987
PharmGKBiPA142672300

Polymorphism and mutation databases

BioMutaiC11orf40

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002630891 – 217Putative uncharacterized protein C11orf40Add BLAST217

Proteomic databases

PaxDbiQ8WZ69
PRIDEiQ8WZ69
ProteomicsDBi75225

PTM databases

iPTMnetiQ8WZ69
PhosphoSitePlusiQ8WZ69

Expressioni

Gene expression databases

BgeeiENSG00000171987 Expressed in 4 organ(s), highest expression level in secondary oocyte
CleanExiHS_C11orf40
GenevisibleiQ8WZ69 HS

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000302918

Structurei

3D structure databases

ProteinModelPortaliQ8WZ69
SMRiQ8WZ69
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410KCKU Eukaryota
ENOG4110NUY LUCA
GeneTreeiENSGT00530000065242
HOGENOMiHOG000111725
InParanoidiQ8WZ69
OMAiLAGQCMS
OrthoDBiEOG091G0L10
PhylomeDBiQ8WZ69

Sequencei

Sequence statusi: Complete.

Q8WZ69-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MALVQALVPR EREPKLSILQ MDRGDPQHSS HWCPEREKVK LLTLKPRETS
60 70 80 90 100
KNILINFYRA FNLDKDVFIH QANHPLTVPS SVVMGDNGHT LAEDDKRPCF
110 120 130 140 150
RVLPCYLERV SSGISISWIS APLPVGAMKH QLLCDLMDLI TLSFWLAGQC
160 170 180 190 200
MSLKATNMQH CKCSIATSDW AIELDRTDYK TLPSEYSILA LLQVFAGKNC
210
MDRVLLHVDV NYLKSLP
Length:217
Mass (Da):24,620
Last modified:March 1, 2002 - v1
Checksum:i727DB58A76CEC2BE
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_029581100F → S. Corresponds to variant dbSNP:rs12795289Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF439154 mRNA Translation: AAL31642.1
CCDSiCCDS31354.1
RefSeqiNP_653264.1, NM_144663.1
UniGeneiHs.350556

Genome annotation databases

EnsembliENST00000307616; ENSP00000302918; ENSG00000171987
GeneIDi143501
KEGGihsa:143501
UCSCiuc010qyg.2 human

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF439154 mRNA Translation: AAL31642.1
CCDSiCCDS31354.1
RefSeqiNP_653264.1, NM_144663.1
UniGeneiHs.350556

3D structure databases

ProteinModelPortaliQ8WZ69
SMRiQ8WZ69
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000302918

PTM databases

iPTMnetiQ8WZ69
PhosphoSitePlusiQ8WZ69

Polymorphism and mutation databases

BioMutaiC11orf40

Proteomic databases

PaxDbiQ8WZ69
PRIDEiQ8WZ69
ProteomicsDBi75225

Protocols and materials databases

DNASUi143501
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000307616; ENSP00000302918; ENSG00000171987
GeneIDi143501
KEGGihsa:143501
UCSCiuc010qyg.2 human

Organism-specific databases

CTDi143501
DisGeNETi143501
EuPathDBiHostDB:ENSG00000171987.1
GeneCardsiC11orf40
HGNCiHGNC:23986 C11orf40
neXtProtiNX_Q8WZ69
OpenTargetsiENSG00000171987
PharmGKBiPA142672300
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410KCKU Eukaryota
ENOG4110NUY LUCA
GeneTreeiENSGT00530000065242
HOGENOMiHOG000111725
InParanoidiQ8WZ69
OMAiLAGQCMS
OrthoDBiEOG091G0L10
PhylomeDBiQ8WZ69

Miscellaneous databases

GenomeRNAii143501
PROiPR:Q8WZ69

Gene expression databases

BgeeiENSG00000171987 Expressed in 4 organ(s), highest expression level in secondary oocyte
CleanExiHS_C11orf40
GenevisibleiQ8WZ69 HS

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiCK040_HUMAN
AccessioniPrimary (citable) accession number: Q8WZ69
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: March 1, 2002
Last modified: September 12, 2018
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  2. Human chromosome 11
    Human chromosome 11: entries, gene names and cross-references to MIM
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations
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Main funding by: National Institutes of Health

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