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Entry version 123 (16 Oct 2019)
Sequence version 1 (01 Mar 2002)
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Protein

Vesicle-associated protein 1-1

Gene

PVA11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. Associates with microtubules.1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processHost-virus interaction

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Vesicle-associated protein 1-1
Alternative name(s):
Plant VAP homolog 11
Short name:
AtPVA11
VAMP-associated protein 1-1
Vesicle-associated protein 27-1
Cleaved into the following chain:
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:PVA11
Synonyms:VAP27, VAP27-1
Ordered Locus Names:At3g60600
ORF Names:T4C21.10
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT3G60600

The Arabidopsis Information Resource

More...
TAIRi
locus:2101766 AT3G60600

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini1 – 232CytoplasmicSequence analysisAdd BLAST232
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei233 – 253Helical; Anchor for type IV membrane proteinSequence analysisAdd BLAST21

Keywords - Cellular componenti

Endoplasmic reticulum, Membrane, Vacuole

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi59 – 61KTT → NAA: Loss of interaction with NET3C and no ER-plasma membrane association. 1 Publication3

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00004257831 – 256Vesicle-associated protein 1-1Add BLAST256
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemoved; alternateCombined sources
ChainiPRO_00004021692 – 256Vesicle-associated protein 1-1, N-terminally processedAdd BLAST255

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineBy similarity1
Modified residuei2N-acetylserine; in Vesicle-associated protein 1-1, N-terminally processedCombined sources1
Modified residuei149PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8VZ95

PRoteomics IDEntifications database

More...
PRIDEi
Q8VZ95

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8VZ95

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q8VZ95

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8VZ95 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8VZ95 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer or homooligomer (PubMed:24909329).

Interacts with the cowpea mosaic virus (CPMV) NTP-binding protein (NTB) (PubMed:11907339).

Interacts with NET3C (PubMed:24909329).

2 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
10545, 103 interactors

Protein interaction database and analysis system

More...
IntActi
Q8VZ95, 90 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT3G60600.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8VZ95

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini22 – 142MSPPROSITE-ProRule annotationAdd BLAST121

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili187 – 232Sequence analysisAdd BLAST46

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0439 Eukaryota
COG5066 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000188310

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8VZ95

Identification of Orthologs from Complete Genome Data

More...
OMAi
LAPPDMT

Database of Orthologous Groups

More...
OrthoDBi
1332028at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8VZ95

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR013783 Ig-like_fold
IPR000535 MSP_dom
IPR008962 PapD-like_sf
IPR016763 VAP

The PANTHER Classification System

More...
PANTHERi
PTHR10809 PTHR10809, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00635 Motile_Sperm, 1 hit

PIRSF; a whole-protein classification database

More...
PIRSFi
PIRSF019693 VAMP-associated, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49354 SSF49354, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50202 MSP, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q8VZ95-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSNIDLIGMS NRDLIGMSNS ELLTVEPLDL QFPFELKKQI SCSLYLTNKT
60 70 80 90 100
DNNVAFKVKT TNPKKYCVRP NTGVVLPRST CEVLVTMQAQ KEAPSDMQCK
110 120 130 140 150
DKFLLQGVIA SPGVTAKEVT PEMFSKEAGH RVEETKLRVT YVAPPRPPSP
160 170 180 190 200
VHEGSEEGSS PRASVSDNGH GSEFSFERFI VDNKAGHQEN TSEARALITK
210 220 230 240 250
LTEEKQSAIQ LNNRLQRELD QLRRESKKSQ SGGIPFMYVL LVGLIGLILG

YIMKRT
Length:256
Mass (Da):28,473
Last modified:March 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2D17D79F0F736068
GO
Isoform 2 (identifier: Q8VZ95-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     176-230: FERFIVDNKA...QLRRESKKSQ → IFMFNFSLRD...FALFKTDFWR
     231-256: Missing.

Note: No experimental confirmation available.
Show »
Length:230
Mass (Da):26,036
Checksum:i2F0C4FAF9C105142
GO
Isoform 3 (identifier: Q8VZ95-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     194-217: ARALITKLTEEKQSAIQLNNRLQR → VFFTILPSLSPSKPCDIIFCFCSV
     218-256: Missing.

Note: No experimental confirmation available.
Show »
Length:217
Mass (Da):23,935
Checksum:i305B6E20A7314EE4
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAM63134 differs from that shown. Reason: Frameshift.Curated
The sequence AAM63134 differs from that shown. Reason: Erroneous initiation. Truncated N-terminus.Curated
The sequence BX824970 differs from that shown. Sequencing errors.Curated
The sequence CAB82664 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti146R → Q in AAM63134 (Ref. 6) Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_040252176 – 230FERFI…SKKSQ → IFMFNFSLRDLSWTTRLDIK KTHLRYFSQFFQVCHRQNHV TSSFAFALFKTDFWR in isoform 2. 1 PublicationAdd BLAST55
Alternative sequenceiVSP_040253194 – 217ARALI…NRLQR → VFFTILPSLSPSKPCDIIFC FCSV in isoform 3. 1 PublicationAdd BLAST24
Alternative sequenceiVSP_040254218 – 256Missing in isoform 3. 1 PublicationAdd BLAST39
Alternative sequenceiVSP_040255231 – 256Missing in isoform 2. 1 PublicationAdd BLAST26

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY364005 mRNA Translation: AAQ63968.1
AL162295 Genomic DNA Translation: CAB82664.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE80086.1
CP002686 Genomic DNA Translation: AEE80087.1
CP002686 Genomic DNA Translation: AEE80088.1
AY065144 mRNA Translation: AAL38320.1
BT006297 mRNA Translation: AAP13405.1
BX822165 mRNA No translation available.
BX824970 mRNA No translation available.
AY085922 mRNA Translation: AAM63134.1 Sequence problems.
AK317675 mRNA Translation: BAH20334.1

Protein sequence database of the Protein Information Resource

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PIRi
T47871

NCBI Reference Sequences

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RefSeqi
NP_001030903.1, NM_001035826.1 [Q8VZ95-3]
NP_001030904.1, NM_001035827.1 [Q8VZ95-2]
NP_567101.1, NM_115924.4 [Q8VZ95-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT3G60600.1; AT3G60600.1; AT3G60600 [Q8VZ95-1]
AT3G60600.2; AT3G60600.2; AT3G60600 [Q8VZ95-3]
AT3G60600.3; AT3G60600.3; AT3G60600 [Q8VZ95-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
825231

Gramene; a comparative resource for plants

More...
Gramenei
AT3G60600.1; AT3G60600.1; AT3G60600 [Q8VZ95-1]
AT3G60600.2; AT3G60600.2; AT3G60600 [Q8VZ95-3]
AT3G60600.3; AT3G60600.3; AT3G60600 [Q8VZ95-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT3G60600

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY364005 mRNA Translation: AAQ63968.1
AL162295 Genomic DNA Translation: CAB82664.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE80086.1
CP002686 Genomic DNA Translation: AEE80087.1
CP002686 Genomic DNA Translation: AEE80088.1
AY065144 mRNA Translation: AAL38320.1
BT006297 mRNA Translation: AAP13405.1
BX822165 mRNA No translation available.
BX824970 mRNA No translation available.
AY085922 mRNA Translation: AAM63134.1 Sequence problems.
AK317675 mRNA Translation: BAH20334.1
PIRiT47871
RefSeqiNP_001030903.1, NM_001035826.1 [Q8VZ95-3]
NP_001030904.1, NM_001035827.1 [Q8VZ95-2]
NP_567101.1, NM_115924.4 [Q8VZ95-1]

3D structure databases

SMRiQ8VZ95
ModBaseiSearch...

Protein-protein interaction databases

BioGridi10545, 103 interactors
IntActiQ8VZ95, 90 interactors
STRINGi3702.AT3G60600.1

PTM databases

iPTMnetiQ8VZ95
SwissPalmiQ8VZ95

Proteomic databases

PaxDbiQ8VZ95
PRIDEiQ8VZ95

Genome annotation databases

EnsemblPlantsiAT3G60600.1; AT3G60600.1; AT3G60600 [Q8VZ95-1]
AT3G60600.2; AT3G60600.2; AT3G60600 [Q8VZ95-3]
AT3G60600.3; AT3G60600.3; AT3G60600 [Q8VZ95-2]
GeneIDi825231
GrameneiAT3G60600.1; AT3G60600.1; AT3G60600 [Q8VZ95-1]
AT3G60600.2; AT3G60600.2; AT3G60600 [Q8VZ95-3]
AT3G60600.3; AT3G60600.3; AT3G60600 [Q8VZ95-2]
KEGGiath:AT3G60600

Organism-specific databases

AraportiAT3G60600
TAIRilocus:2101766 AT3G60600

Phylogenomic databases

eggNOGiKOG0439 Eukaryota
COG5066 LUCA
HOGENOMiHOG000188310
InParanoidiQ8VZ95
OMAiLAPPDMT
OrthoDBi1332028at2759
PhylomeDBiQ8VZ95

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q8VZ95

Gene expression databases

ExpressionAtlasiQ8VZ95 baseline and differential
GenevisibleiQ8VZ95 AT

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR013783 Ig-like_fold
IPR000535 MSP_dom
IPR008962 PapD-like_sf
IPR016763 VAP
PANTHERiPTHR10809 PTHR10809, 1 hit
PfamiView protein in Pfam
PF00635 Motile_Sperm, 1 hit
PIRSFiPIRSF019693 VAMP-associated, 1 hit
SUPFAMiSSF49354 SSF49354, 1 hit
PROSITEiView protein in PROSITE
PS50202 MSP, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiVAP11_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8VZ95
Secondary accession number(s): B9DHW7
, Q2V3M6, Q2V3M7, Q8LDM1, Q9M003
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 30, 2010
Last sequence update: March 1, 2002
Last modified: October 16, 2019
This is version 123 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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