Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
We will be switching to the new UniProt website on Tuesday, June 28. Please explore and share your feedback. Take me to UniProt BETA

UniProtKB - Q8VYW7 (Q8VYW7_ARATH)

Entry version 133 (19 Jan 2022)
Sequence version 1 (01 Mar 2002)
Previous versions | rss
Add a publicationFeedback
Protein
Submitted name:

AT5g16210/T21H19_130

Gene

At5g16210

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
AT5g16210/T21H19_130Imported
Submitted name:
HEAT repeat-containing proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:At5g16210Imported
ORF Names:T21H19.130Imported, T21H19_130Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

Organism-specific databases

Arabidopsis Information Portal

More...Araporti		AT5G16210

The Arabidopsis Information Resource

More...TAIRi		locus:2181407, AT5G16210

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		191827

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		3702.AT5G16210.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini4 – 36LisHInterPro annotationAdd BLAST33
Domaini150 – 182LisHInterPro annotationAdd BLAST33
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati572 – 606HEATPROSITE-ProRule annotationAdd BLAST35
Repeati933 – 971HEATPROSITE-ProRule annotationAdd BLAST39

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni105 – 128DisorderedSequence analysisAdd BLAST24
Regioni1123 – 1149DisorderedSequence analysisAdd BLAST27

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili215 – 249Sequence analysisAdd BLAST35
Coiled coili257 – 291Sequence analysisAdd BLAST35

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG0211, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_006254_0_0_1

Identification of Orthologs from Complete Genome Data

More...OMAi		RQDLNCA

Database of Orthologous Groups

More...OrthoDBi		73423at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.25.10.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR021133, HEAT_type_2
IPR006594, LisH
IPR040362, RELCH

The PANTHER Classification System

More...PANTHERi		PTHR32059, PTHR32059, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00667, LisH, 2 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF48371, SSF48371, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50077, HEAT_REPEAT, 2 hits
PS50896, LISH, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q8VYW7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDAERSSLCN FFVNFLMEEN YLLTAFELLH ELLDDGRDAQ AIRLKEFFSD 
        60         70         80         90        100
PSRFPPDQIS RYNSIRVADP QSLLEEKEAL AEKLAISEYE FRLAQEDIAR 
       110        120        130        140        150
LKTEGQKKSV PSIDKSEEMD SDEFGGNRPE IQRKKKDFSF TDIGPLKNNE 
       160        170        180        190        200
RQDLNCAVKE YLLLAGYRLT AMTFYEEVTD QNLDVWQDSP AHVPDALRYY 
       210        220        230        240        250
YYQYLSSTSE AAEEKIAMLQ ENESLKKEIE RLSKEKDGLL KSKENFEEQI 
       260        270        280        290        300
GAFNKSTESL QKDLRDREKQ VQSLKQSSEH QRRNLNDCRA EITSLKMHIE 
       310        320        330        340        350
GSRAGQYVSL NEGDPVKLQS KEVEEQISTL SEEVVNPTVE KDGGLISKVS 
       360        370        380        390        400
ISAEKGHIQT EDDMVVEEVK NIIADQREVA GEAGNISYAN NGTLENQKEV 
       410        420        430        440        450
SNYLLSPSNG NFSPRDLGSI LKVDPGIGRD SNSKSDNANG EAASEEMGLG 
       460        470        480        490        500
TIQILADALP NIVPYVLINH REELLPLMMC AIERHPVSST RDSLTHTLFN 
       510        520        530        540        550
LIKRPDEQQR RIIMDACVSL SRNVGEMRTE TELLPQCWEQ INHTYEERRL 
       560        570        580        590        600
LVAQSCGELA EYVRPEIRDS LILSIVQQLI EDSATVVREA AAHNLALLLP 
       610        620        630        640        650
LFPNTDKYFK VEEMMFQLIC DPSGLVVETT LKELLPAVIK WGNRLDHILR 
       660        670        680        690        700
GLLSHTLSSA QHCPPLSGVE GSLESHLRVL GERERWNIDV LLRMLMELLP 
       710        720        730        740        750
AIHQKAMTTC PFSSISKSEE SAFSVSLLEI YAEGRSEWPM FEWMHVDCFA 
       760        770        780        790        800
NLLQLACMLP QKEDHLRNRI TKFLLAVSER FGSSYLTHIE LPVFLVAAGD 
       810        820        830        840        850
DEADLRFLPS AIHPRIKGLK PRTAVANRLA TLCILPLLLA GVLGAPSKRE 
       860        870        880        890        900
ELTIFLRQLL VESKTKENQS SKHNNEVLDA VRFLCTFEVH HNMIFGILWE 
       910        920        930        940        950
MVVDSTAELK INAAKLLKTI VPYIDAKVAS ANVLPALITL GSDQNLNVKY 
       960        970        980        990       1000
ASIDAFGSVA QHFKVDMIVD KILVQMDAFM EDGSHEAIIA VIRALLVAIP 
      1010       1020       1030       1040       1050
HTTERLRDYL LSKILQLSAS PSSSTDVNRR RERANAFCEA IRALDATDLS 
      1060       1070       1080       1090       1100
QTSVKEYLLP AIQNLLKDPD ALDPAHKEAL EIIMKERSGG TFEAISKAMG 
      1110       1120       1130       1140       1150
AHLGIASSVT SLFGEGGLLG KKEATESTAP GSPTGQGPES PKVVAAASED 
      1160       1170       1180
TRFRRIMRGN FTEMLRSKAK TQDETQPQNH
Length:1,180
Mass (Da):132,309
Last modified:March 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3FEFFFC006511FB4
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AY069870 mRNA Translation: AAL47427.1
CP002688 Genomic DNA Translation: AED92261.1

NCBI Reference Sequences

More...RefSeqi		NP_197125.2, NM_121626.4

Genome annotation databases

Ensembl plant genome annotation project

More...EnsemblPlantsi		AT5G16210.1; AT5G16210.1; AT5G16210

Database of genes from NCBI RefSeq genomes

More...GeneIDi		831480

Gramene; a comparative resource for plants

More...Gramenei		AT5G16210.1; AT5G16210.1; AT5G16210

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ath:AT5G16210

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY069870 mRNA Translation: AAL47427.1
CP002688 Genomic DNA Translation: AED92261.1
RefSeqiNP_197125.2, NM_121626.4

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi3702.AT5G16210.1

Proteomic databases

ProteomicsDBi191827

Genome annotation databases

EnsemblPlantsiAT5G16210.1; AT5G16210.1; AT5G16210
GeneIDi831480
GrameneiAT5G16210.1; AT5G16210.1; AT5G16210
KEGGiath:AT5G16210

Organism-specific databases

AraportiAT5G16210
TAIRilocus:2181407, AT5G16210

Phylogenomic databases

eggNOGiKOG0211, Eukaryota
HOGENOMiCLU_006254_0_0_1
OMAiRQDLNCA
OrthoDBi73423at2759

Family and domain databases

Gene3Di1.25.10.10, 2 hits
InterProiView protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR021133, HEAT_type_2
IPR006594, LisH
IPR040362, RELCH
PANTHERiPTHR32059, PTHR32059, 1 hit
SMARTiView protein in SMART
SM00667, LisH, 2 hits
SUPFAMiSSF48371, SSF48371, 1 hit
PROSITEiView protein in PROSITE
PS50077, HEAT_REPEAT, 2 hits
PS50896, LISH, 2 hits

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ8VYW7_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8VYW7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2002
Last sequence update: March 1, 2002
Last modified: January 19, 2022
This is version 133 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again