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Protein

Probable LRR receptor-like serine/threonine-protein kinase At4g30520

Gene

At4g30520

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei331ATPPROSITE-ProRule annotation1
Active sitei426Proton acceptorPROSITE-ProRule annotation1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi309 – 317ATPPROSITE-ProRule annotation9

GO - Molecular functioni

  • ATP binding Source: UniProtKB-KW
  • protein serine/threonine kinase activity Source: TAIR
  • protein tyrosine kinase activity Source: TAIR
  • transmembrane receptor protein serine/threonine kinase activity Source: GO_Central

GO - Biological processi

  • cell surface receptor signaling pathway Source: GO_Central
  • leaf senescence Source: TAIR

Keywordsi

Molecular functionKinase, Receptor, Serine/threonine-protein kinase, Transferase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable LRR receptor-like serine/threonine-protein kinase At4g30520 (EC:2.7.11.1)
Gene namesi
Ordered Locus Names:At4g30520
ORF Names:F17I23_140
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G30520
TAIRilocus:2118811 AT4G30520

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini31 – 238ExtracellularSequence analysisAdd BLAST208
Transmembranei239 – 259HelicalSequence analysisAdd BLAST21
Topological domaini260 – 648CytoplasmicSequence analysisAdd BLAST389

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 30Sequence analysisAdd BLAST30
ChainiPRO_000040972831 – 648Probable LRR receptor-like serine/threonine-protein kinase At4g30520Add BLAST618

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi99N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi112N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi158N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi184N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei300PhosphothreonineBy similarity1
Modified residuei326PhosphothreonineBy similarity1
Modified residuei384PhosphoserineBy similarity1
Modified residuei387PhosphoserineBy similarity1
Modified residuei459PhosphothreonineBy similarity1
Modified residuei460PhosphothreonineBy similarity1
Modified residuei465PhosphothreonineBy similarity1
Modified residuei473PhosphotyrosineBy similarity1
Modified residuei475PhosphoserineBy similarity1
Modified residuei476PhosphothreonineBy similarity1
Modified residuei480PhosphoserineBy similarity1
Modified residuei555PhosphothreonineBy similarity1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDbiQ8VYT3
PRIDEiQ8VYT3

PTM databases

iPTMnetiQ8VYT3

Expressioni

Gene expression databases

ExpressionAtlasiQ8VYT3 baseline and differential
GenevisibleiQ8VYT3 AT

Interactioni

Protein-protein interaction databases

BioGridi14462, 7 interactors
IntActiQ8VYT3, 2 interactors
STRINGi3702.AT4G30520.1

Structurei

3D structure databases

ProteinModelPortaliQ8VYT3
SMRiQ8VYT3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati100 – 125LRR 1Add BLAST26
Repeati127 – 148LRR 2Add BLAST22
Repeati149 – 172LRR 3Add BLAST24
Repeati174 – 199LRR 4Add BLAST26
Domaini303 – 582Protein kinasePROSITE-ProRule annotationAdd BLAST280

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi224 – 231Poly-Ser8

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IGB7 Eukaryota
ENOG410YEGZ LUCA
HOGENOMiHOG000116554
InParanoidiQ8VYT3
OMAiCATSGER
OrthoDBiEOG093604S7
PhylomeDBiQ8VYT3

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR011009 Kinase-like_dom_sf
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR013210 LRR_N_plant-typ
IPR000719 Prot_kinase_dom
IPR017441 Protein_kinase_ATP_BS
IPR008271 Ser/Thr_kinase_AS
PfamiView protein in Pfam
PF13855 LRR_8, 1 hit
PF08263 LRRNT_2, 1 hit
PF00069 Pkinase, 1 hit
SMARTiView protein in SMART
SM00220 S_TKc, 1 hit
SUPFAMiSSF56112 SSF56112, 1 hit
PROSITEiView protein in PROSITE
PS51450 LRR, 5 hits
PS00107 PROTEIN_KINASE_ATP, 1 hit
PS50011 PROTEIN_KINASE_DOM, 1 hit
PS00108 PROTEIN_KINASE_ST, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8VYT3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVVTKKTMK IQIHLLYSFL FLCFSTLTLS SEPRNPEVEA LISIRNNLHD
60 70 80 90 100
PHGALNNWDE FSVDPCSWAM ITCSPDNLVI GLGAPSQSLS GGLSESIGNL
110 120 130 140 150
TNLRQVSLQN NNISGKIPPE LGFLPKLQTL DLSNNRFSGD IPVSIDQLSS
160 170 180 190 200
LQYLRLNNNS LSGPFPASLS QIPHLSFLDL SYNNLSGPVP KFPARTFNVA
210 220 230 240 250
GNPLICRSNP PEICSGSINA SPLSVSLSSS SGRRSNRLAI ALSVSLGSVV
260 270 280 290 300
ILVLALGSFC WYRKKQRRLL ILNLNDKQEE GLQGLGNLRS FTFRELHVYT
310 320 330 340 350
DGFSSKNILG AGGFGNVYRG KLGDGTMVAV KRLKDINGTS GDSQFRMELE
360 370 380 390 400
MISLAVHKNL LRLIGYCATS GERLLVYPYM PNGSVASKLK SKPALDWNMR
410 420 430 440 450
KRIAIGAARG LLYLHEQCDP KIIHRDVKAA NILLDECFEA VVGDFGLAKL
460 470 480 490 500
LNHADSHVTT AVRGTVGHIA PEYLSTGQSS EKTDVFGFGI LLLELITGLR
510 520 530 540 550
ALEFGKTVSQ KGAMLEWVRK LHEEMKVEEL LDRELGTNYD KIEVGEMLQV
560 570 580 590 600
ALLCTQYLPA HRPKMSEVVL MLEGDGLAER WAASHNHSHF YHANISFKTI
610 620 630 640
SSLSTTSVSR LDAHCNDPTY QMFGSSAFDD DDDHQPLDSF AMELSGPR
Length:648
Mass (Da):71,194
Last modified:March 1, 2002 - v1
Checksum:i601166B450D17428
GO

Sequence cautioni

The sequence CAB79770 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL161577 Genomic DNA Translation: CAB79770.1 Sequence problems.
CP002687 Genomic DNA Translation: AEE85776.1
AY070043 mRNA Translation: AAL49800.1
AY096538 mRNA Translation: AAM20188.1
FJ708760 mRNA Translation: ACN59353.1
PIRiA85357
RefSeqiNP_194781.2, NM_119198.5
UniGeneiAt.28424

Genome annotation databases

EnsemblPlantsiAT4G30520.1; AT4G30520.1; AT4G30520
GeneIDi829175
GrameneiAT4G30520.1; AT4G30520.1; AT4G30520
KEGGiath:AT4G30520

Similar proteinsi

Entry informationi

Entry nameiY4052_ARATH
AccessioniPrimary (citable) accession number: Q8VYT3
Secondary accession number(s): Q9M0A8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 28, 2011
Last sequence update: March 1, 2002
Last modified: July 18, 2018
This is version 141 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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