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Protein

Plastid division protein CDP1, chloroplastic

Gene

CDP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Component of the plastid division machinery required for PDV1 localization to constriction sites. Involved in chloroplast division site placement. Seems to inhibit FtsZ assembly, functioning as an antagonistic regulator of FtsZ dynamics against ARC6.2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

  • protein self-association Source: TAIR

GO - Biological processi

  • chloroplast fission Source: TAIR
  • plastid fission Source: TAIR

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Plastid division protein CDP1, chloroplastic
Alternative name(s):
ARC6-homolog protein
Protein CHLOROPLAST DIVISION SITE POSITIONING 1
Short name:
AtCDP1
Protein PARALOG OF ARC6
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CDP1
Synonyms:ARC6H, PARC6
Ordered Locus Names:At3g19180
ORF Names:MVI11.9
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT3G19180

The Arabidopsis Information Resource

More...
TAIRi
locus:2094143 AT3G19180

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the subcellular compartment where each non-membrane region of a membrane-spanning protein is found.<p><a href='/help/topo_dom' target='_top'>More...</a></p>Topological domaini77 – 357StromalSequence analysisAdd BLAST281
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei358 – 378HelicalSequence analysisAdd BLAST21
Topological domaini379 – 572Chloroplast intermembraneSequence analysisAdd BLAST194
Transmembranei573 – 593HelicalSequence analysisAdd BLAST21
Topological domaini594 – 819StromalSequence analysisAdd BLAST226

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Chloroplast, Membrane, Plastid, Plastid inner membrane

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Defects of chloroplast and FtsZ filament morphology (e.g. long FtsZ filaments formed by multiple rings or spirals); elongated chloroplasts with multiple division sites.2 Publications

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi112D → N in parc6-2; reduced number of heterogeneous chloroplasts. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 76ChloroplastSequence analysisAdd BLAST76
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000040691277 – 819Plastid division protein CDP1, chloroplasticAdd BLAST743

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8VY16

PRoteomics IDEntifications database

More...
PRIDEi
Q8VY16

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8VY16

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Exclusively expressed in young green tissues such as young cotyledons, shoot apex, emerging leaves and budding inflorescence.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8VY16 baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Self-interacts. Interacts (via N-terminus) with ARC3.2 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
ARC3Q6F6B54EBI-2349234,EBI-2367605

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
6785, 4 interactors

Protein interaction database and analysis system

More...
IntActi
Q8VY16, 1 interactor

STRING: functional protein association networks

More...
STRINGi
3702.AT3G19180.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1819
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
Q8VY16

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8VY16

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili419 – 440Sequence analysisAdd BLAST22
Coiled coili759 – 784Sequence analysisAdd BLAST26

Keywords - Domaini

Coiled coil, Transit peptide, Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IJJV Eukaryota
ENOG410YAIP LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000006302

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8VY16

Identification of Orthologs from Complete Genome Data

More...
OMAi
EESFCSY

Database of Orthologous Groups

More...
OrthoDBi
EOG093602EQ

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8VY16

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR025344 DUF4101

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13355 DUF4101, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q8VY16-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MPVAYTFPVL PSSCLLCGIS NRSTSFVVDR PELQISGLLV VRSESGEFFG
60 70 80 90 100
SGLSLRRFQR EGRRRLNAAG GGIHVVDNAP SRTSSLAAST STIELPVTCY
110 120 130 140 150
QLIGVSEQAE KDEVVKSVIN LKKTDAEEGY TMEAAAARQD LLMDVRDKLL
160 170 180 190 200
FESEYAGNLK EKIAPKSPLR IPWAWLPGAL CLLQEVGQEK LVLDIGRAAL
210 220 230 240 250
RNLDSKPYIH DIFLSMALAE CAIAKAAFEV NKVSQGFEAL ARAQSFLKSK
260 270 280 290 300
VTLGKLALLT QIEESLEELA PPCTLDLLGL PRTPENAERR RGAIAALREL
310 320 330 340 350
LRQGLSVEAS CQIQDWPCFL SQAISRLLAT EIVDLLPWDD LAITRKNKKS
360 370 380 390 400
LESHNQRVVI DFNCFYMVLL GHIAVGFSGK QNETINKAKT ICECLIASEG
410 420 430 440 450
VDLKFEEAFC SFLLKQGSEA EALEKLKQLE SNSDSAVRNS ILGKESRSTS
460 470 480 490 500
ATPSLEAWLM ESVLANFPDT RGCSPSLANF FRAEKKYPEN KKMGSPSIMN
510 520 530 540 550
HKTNQRPLST TQFVNSSQHL YTAVEQLTPT DLQSPVVSAK NNDETSASMP
560 570 580 590 600
SVQLKRNLGV HKNKIWDEWL SQSSLIGRVS VVALLGCTVF FSLKLSGIRS
610 620 630 640 650
GRLQSMPISV SARPHSESDS FLWKTESGNF RKNLDSVNRN GIVGNIKVLI
660 670 680 690 700
DMLKMHCGEH PDALYLKSSG QSATSLSHSA SELHKRPMDT EEAEELVRQW
710 720 730 740 750
ENVKAEALGP THQVYSLSEV LDESMLVQWQ TLAQTAEAKS CYWRFVLLHL
760 770 780 790 800
EVLQAHIFED GIAGEAAEIE ALLEEAAELV DESQPKNAKY YSTYKIRYIL
810
KKQEDGLWKF CQSDIQIQK
Length:819
Mass (Da):90,823
Last modified:April 5, 2011 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA3F6FB34A264657E
GO
Isoform 2 (identifier: Q8VY16-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     729-819: WQTLAQTAEA...FCQSDIQIQK → VTVSIHLLLFLYLIMLVYYS

Note: Derived from EST data. No experimental confirmation available.
Show »
Length:748
Mass (Da):82,629
Checksum:i0D73889B42FE99E0
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAB02958 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti268E → G in AAL66980 (PubMed:14593172).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting. The information stored in this subsection is used to automatically construct alternative protein sequence(s) for display.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_040894729 – 819WQTLA…IQIQK → VTVSIHLLLFLYLIMLVYYS in isoform 2. CuratedAdd BLAST91

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AP000419 Genomic DNA Translation: BAB02958.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE76203.1
CP002686 Genomic DNA Translation: AEE76204.1
AY074283 mRNA Translation: AAL66980.1

NCBI Reference Sequences

More...
RefSeqi
NP_001030725.1, NM_001035648.1 [Q8VY16-2]
NP_188549.2, NM_112805.5 [Q8VY16-1]

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
At.42679

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT3G19180.1; AT3G19180.1; AT3G19180 [Q8VY16-1]
AT3G19180.2; AT3G19180.2; AT3G19180 [Q8VY16-2]

Database of genes from NCBI RefSeq genomes

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GeneIDi
821452

Gramene; a comparative resource for plants

More...
Gramenei
AT3G19180.1; AT3G19180.1; AT3G19180 [Q8VY16-1]
AT3G19180.2; AT3G19180.2; AT3G19180 [Q8VY16-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT3G19180

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP000419 Genomic DNA Translation: BAB02958.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE76203.1
CP002686 Genomic DNA Translation: AEE76204.1
AY074283 mRNA Translation: AAL66980.1
RefSeqiNP_001030725.1, NM_001035648.1 [Q8VY16-2]
NP_188549.2, NM_112805.5 [Q8VY16-1]
UniGeneiAt.42679

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...
PDBei

Protein Data Bank RCSB

More...
RCSB PDBi

Protein Data Bank Japan

More...
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5U9LX-ray2.52A/B596-819[»]
5U9OX-ray3.37A/B/C/D/E/F/G/H684-819[»]
ProteinModelPortaliQ8VY16
SMRiQ8VY16
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi6785, 4 interactors
IntActiQ8VY16, 1 interactor
STRINGi3702.AT3G19180.1

PTM databases

iPTMnetiQ8VY16

Proteomic databases

PaxDbiQ8VY16
PRIDEiQ8VY16

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G19180.1; AT3G19180.1; AT3G19180 [Q8VY16-1]
AT3G19180.2; AT3G19180.2; AT3G19180 [Q8VY16-2]
GeneIDi821452
GrameneiAT3G19180.1; AT3G19180.1; AT3G19180 [Q8VY16-1]
AT3G19180.2; AT3G19180.2; AT3G19180 [Q8VY16-2]
KEGGiath:AT3G19180

Organism-specific databases

AraportiAT3G19180
TAIRilocus:2094143 AT3G19180

Phylogenomic databases

eggNOGiENOG410IJJV Eukaryota
ENOG410YAIP LUCA
HOGENOMiHOG000006302
InParanoidiQ8VY16
OMAiEESFCSY
OrthoDBiEOG093602EQ
PhylomeDBiQ8VY16

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q8VY16

Gene expression databases

ExpressionAtlasiQ8VY16 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR025344 DUF4101
PfamiView protein in Pfam
PF13355 DUF4101, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCDP1_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8VY16
Secondary accession number(s): Q2V3U5, Q9LJL2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: April 5, 2011
Last modified: November 7, 2018
This is version 82 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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