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Protein

Pecanex-like protein 3

Gene

Pcnx3

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Pecanex-like protein 3
Alternative name(s):
Pecanex homolog protein 3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Pcnx3Imported
Synonyms:Pcnxl3
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1861733 Pcnx3

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular_location_section">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei33 – 53HelicalSequence analysisAdd BLAST21
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Transmembranei793 – 815HelicalSequence analysisAdd BLAST23
Transmembranei819 – 836HelicalSequence analysisAdd BLAST18
Transmembranei852 – 872HelicalSequence analysisAdd BLAST21
Transmembranei880 – 900HelicalSequence analysisAdd BLAST21
Transmembranei903 – 923HelicalSequence analysisAdd BLAST21
Transmembranei946 – 968HelicalSequence analysisAdd BLAST23
Transmembranei980 – 1000HelicalSequence analysisAdd BLAST21
Transmembranei1053 – 1073HelicalSequence analysisAdd BLAST21
Transmembranei1078 – 1098HelicalSequence analysisAdd BLAST21
Transmembranei1244 – 1264HelicalSequence analysisAdd BLAST21
Transmembranei1280 – 1300HelicalSequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002157961 – 2028Pecanex-like protein 3Add BLAST2028

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi95N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei127PhosphoserineCombined sources1
Modified residuei129PhosphothreonineBy similarity1
Glycosylationi319N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei370PhosphothreonineBy similarity1
Modified residuei392PhosphoserineBy similarity1
Modified residuei431PhosphoserineCombined sources1
Modified residuei505PhosphoserineCombined sources1
Modified residuei521PhosphoserineCombined sources1
Modified residuei1025PhosphoserineBy similarity1
Modified residuei1697PhosphoserineBy similarity1
Glycosylationi1770N-linked (GlcNAc...) asparagineSequence analysis1
Modified residuei1909PhosphoserineBy similarity1
Modified residuei1955PhosphoserineBy similarity1

Keywords - PTMi

Glycoprotein, Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8VI59

PeptideAtlas

More...
PeptideAtlasi
Q8VI59

PRoteomics IDEntifications database

More...
PRIDEi
Q8VI59

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8VI59

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q8VI59

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q8VI59

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000054874 Expressed in 261 organ(s), highest expression level in cerebellum

CleanEx database of gene expression profiles

More...
CleanExi
MM_PCNXL3

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8VI59 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8VI59 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000109245

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
Q8VI59

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi425 – 458Ser-richAdd BLAST34
Compositional biasi809 – 812Poly-Leu4
Compositional biasi1427 – 1430Poly-Cys4
Compositional biasi1841 – 1845Poly-Gly5
Compositional biasi1853 – 1924Pro-richAdd BLAST72

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the pecanex family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3604 Eukaryota
ENOG410XPRI LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000158735

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000007773

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG045627

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8VI59

Identification of Orthologs from Complete Genome Data

More...
OMAi
CNSRRQT

Database of Orthologous Groups

More...
OrthoDBi
EOG091G007W

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8VI59

TreeFam database of animal gene trees

More...
TreeFami
TF313570

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR039797 Pecanex
IPR007735 Pecanex_C

The PANTHER Classification System

More...
PANTHERi
PTHR12372 PTHR12372, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF05041 Pecanex_C, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 5 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q8VI59-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGSQVLQILR QGVWASLTGG WFFDPHQSTF SNCFHLYVWI FLLIFPFLLY
60 70 80 90 100
MVLPPSLMVA GVYCLVVAVI FATIKTVNYR LHAMFDQGEI VEKRNSTMGE
110 120 130 140 150
QEEEAAQGES SLPRDPGVEM TVFRKVSSTP PVRCSSQHSV FGFNQVSELL
160 170 180 190 200
PRMEDSGPLR DIKELVREQG SNNVIVTSAD REMLKLSSQE KLIGDLPQTP
210 220 230 240 250
PGVVPDPSLP STDSSERSPM AGDGVPWGGS GVADTPMSPL LKGSLSQELS
260 270 280 290 300
KSFLTLTRPD RALVRTSSRR EQCRGTGGYQ PLDRRGSGDP MPQKAGSSDS
310 320 330 340 350
CFSGTDRETL SSFKSEKTNS THLDSPPGGH APEGSDTDPP SEAELPASPD
360 370 380 390 400
AGVPSDDTLR SFDTVIGAGT PPGQTEPLLV VRPKDLALLR PSKRRPPMRG
410 420 430 440 450
HSPPGRTPRR PLLEGSGFFE DEDTSEGSEL SPASSLRSQR RYSTDSSSST
460 470 480 490 500
SCYSPESSQG AAGGPRKRRA PHGAEEGTAV PPKRPYGTQR TPSTASAKTH
510 520 530 540 550
ARVLSMDGAG GDVLRAPLAG SKAELEAQPG MELAAGEPAV LPPEARRGPA
560 570 580 590 600
ANQPGWRGEL QEEGAVGGAP EETGQRECTS NVRRAQAIRR RHNAGSNPTP
610 620 630 640 650
PASVMGSPPS SLQEAQRGRA ASHSRALTLP SALHFASSLL LTRAGPNVHE
660 670 680 690 700
ASNFDDTSEG AVHYFYDESG VRRSYTFGLA GGGYENPVSQ PGEQAANGAW
710 720 730 740 750
DRHSHSSSFH SADVPEATGG LNLLQPRPVV LQGMQVRRVP LEIPEEQTLM
760 770 780 790 800
EEAPPRAQHS YKYWFLPGRW TSVRYERLAL LALLDRTRGV MENIFGVGLS
810 820 830 840 850
SLVAFLGYLL LLKGFFTDIW VFQFCLVIAS CQYSLLKSVQ PDAASPMHGH
860 870 880 890 900
NWVIAYSRPV YFCICCLLIW LLDALGTAQP FPPVSLYGLT LFSASFFFCA
910 920 930 940 950
RDVATVFTLC FPFVFLLGLL PQVNTCLMYL LEQIDMHGFG GTAATSPLTA
960 970 980 990 1000
VFSLTRSLLA AALLYGFCLG AIKTPWPEQH VPVLFSVFCG LLVAMSYHLS
1010 1020 1030 1040 1050
RQSSDPTVLW SLVRSKLFPE LEERSLETAR VEPPDPLPEK MRQSVREVLH
1060 1070 1080 1090 1100
SDLVMCVVIA VLTFAVSAST VFIALKSVLG FVLYALAGAV GFFTHYLLPQ
1110 1120 1130 1140 1150
LRKQLPWFCL SQPVLKPLEY SQYEVRGAAQ VMWFEKLYAG LQCAEKYLIY
1160 1170 1180 1190 1200
PAVVLNALTV DAHTVVSHPD KFCLYCRALL MTVAGLKLLR SAFCCPPQQY
1210 1220 1230 1240 1250
LTLAFTVLLF HFDYPRLSQG FLLDYFLMSL LCSKLWDLLY KLRFVLTYIA
1260 1270 1280 1290 1300
PWQITWGSAF HAFAQPFAVP HSAMLFLQAL LSGLFSTPLN PLLGSAVFIM
1310 1320 1330 1340 1350
SYARPLKFWE RDYNTKRVDH SNTRLVTQLD RNPGADDNNL NSIFYEHLTR
1360 1370 1380 1390 1400
SLQHTLCGDL VLGRWGNYGP GDCFVLASDY LNALVHLIEV GNGLITFQLR
1410 1420 1430 1440 1450
GLEFRGTYCQ QREVEAITEG VEEDEGCCCC EPGHLPRVLS FNAAFGQRWL
1460 1470 1480 1490 1500
AWEVTASKYV LEGYSISDNN AASMLQVFDL RKILVTYYVK SIIYYVSRSP
1510 1520 1530 1540 1550
KLETWLNHEG IAAALRPVRA LGYADSDPTF SLSVDEDYDL RLSGLSLPSF
1560 1570 1580 1590 1600
CAVHLEWIQY CASRRSQPVD QDWNSPLVTL CFGLCVLGRR ALGTASHSMS
1610 1620 1630 1640 1650
ASLEPFLYGL HALFKGDFRI TSPRDEWVFA DMDLLHRVVA PGVRMALKLH
1660 1670 1680 1690 1700
QDHFTSPDEY EEPAALYDAI AANEERLVIS HEGDPAWRSA ILSNTPSLLA
1710 1720 1730 1740 1750
LRHVMDDASD EYKIIMLNRR HLSFRVIKVN RECVRGLWAG QQQELVFLRN
1760 1770 1780 1790 1800
RNPERGSIQN AKQALRNMIN SSCDQPLGYP IYVSPLTTSL AGSHPQLRAL
1810 1820 1830 1840 1850
WGGPVSLGAI ARWLLRSWER LHKGCGAGCN SGGNVDDSDC GGGGGLTSLS
1860 1870 1880 1890 1900
NHPPLAHPTP ENAAGSSEQP LPPGPSWGPR PSLSGSGDGR PPPLLQWPPP
1910 1920 1930 1940 1950
RLPGPPPASP APTEGPRPSR PSGPALLNSE GPSGKWSLGG RKGLGGPDGE
1960 1970 1980 1990 2000
PASGSPKGGT PKSQAPLDLS LSPDVSSEAS PARTTQDLPC LDSSIPEGCT
2010 2020
PSGAPGDWPV PAEERESPAA QPLLEHQY
Length:2,028
Mass (Da):221,573
Last modified:April 29, 2008 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB51969382FBFCA89
GO
Isoform 2 (identifier: Q8VI59-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     161-568: Missing.

Show »
Length:1,620
Mass (Da):178,898
Checksum:i01524ACED13B43F6
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6SDA4F6SDA4_MOUSE
Pecanex-like protein 3
Pcnx3 Pcnxl3
280Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F7DCB1F7DCB1_MOUSE
Pecanex-like protein 3
Pcnx3 Pcnxl3
712Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6VNK1F6VNK1_MOUSE
Pecanex-like protein 3
Pcnx3 Pcnxl3
240Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F7AXS1F7AXS1_MOUSE
Pecanex-like protein 3
Pcnx3 Pcnxl3
254Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6VP43F6VP43_MOUSE
Pecanex-like protein 3
Pcnx3 Pcnxl3
129Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting. The information stored in this subsection is used to automatically construct alternative protein sequence(s) for display.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_033246161 – 568Missing in isoform 2. 1 PublicationAdd BLAST408

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
BC096538 mRNA No translation available.
AF237953 mRNA Translation: AAL62024.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS29475.2 [Q8VI59-1]

NCBI Reference Sequences

More...
RefSeqi
NP_659117.2, NM_144868.3 [Q8VI59-1]

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
Mm.329650

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000068169; ENSMUSP00000063786; ENSMUSG00000054874 [Q8VI59-2]
ENSMUST00000113615; ENSMUSP00000109245; ENSMUSG00000054874 [Q8VI59-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
104401

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:104401

UCSC genome browser

More...
UCSCi
uc008gep.2 mouse [Q8VI59-2]
uc008geq.2 mouse [Q8VI59-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC096538 mRNA No translation available.
AF237953 mRNA Translation: AAL62024.1
CCDSiCCDS29475.2 [Q8VI59-1]
RefSeqiNP_659117.2, NM_144868.3 [Q8VI59-1]
UniGeneiMm.329650

3D structure databases

ProteinModelPortaliQ8VI59
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000109245

PTM databases

iPTMnetiQ8VI59
PhosphoSitePlusiQ8VI59
SwissPalmiQ8VI59

Proteomic databases

PaxDbiQ8VI59
PeptideAtlasiQ8VI59
PRIDEiQ8VI59

Protocols and materials databases

The DNASU plasmid repository

More...
DNASUi
104401
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000068169; ENSMUSP00000063786; ENSMUSG00000054874 [Q8VI59-2]
ENSMUST00000113615; ENSMUSP00000109245; ENSMUSG00000054874 [Q8VI59-1]
GeneIDi104401
KEGGimmu:104401
UCSCiuc008gep.2 mouse [Q8VI59-2]
uc008geq.2 mouse [Q8VI59-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
399909
MGIiMGI:1861733 Pcnx3

Phylogenomic databases

eggNOGiKOG3604 Eukaryota
ENOG410XPRI LUCA
GeneTreeiENSGT00940000158735
HOGENOMiHOG000007773
HOVERGENiHBG045627
InParanoidiQ8VI59
OMAiCNSRRQT
OrthoDBiEOG091G007W
PhylomeDBiQ8VI59
TreeFamiTF313570

Miscellaneous databases

Protein Ontology

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PROi
PR:Q8VI59

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000054874 Expressed in 261 organ(s), highest expression level in cerebellum
CleanExiMM_PCNXL3
ExpressionAtlasiQ8VI59 baseline and differential
GenevisibleiQ8VI59 MM

Family and domain databases

InterProiView protein in InterPro
IPR039797 Pecanex
IPR007735 Pecanex_C
PANTHERiPTHR12372 PTHR12372, 1 hit
PfamiView protein in Pfam
PF05041 Pecanex_C, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPCX3_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8VI59
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2003
Last sequence update: April 29, 2008
Last modified: December 5, 2018
This is version 101 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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