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Entry version 144 (02 Jun 2021)
Sequence version 1 (01 Mar 2002)
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Protein

Tether containing UBX domain for GLUT4

Gene

Aspscr1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Enhances VCP methylation catalyzed by VCPKMT (By similarity).

Tethering protein that sequesters GLUT4-containing vesicles in the cytoplasm in the absence of insulin. Modulates the amount of GLUT4 that is available at the cell surface.

By similarity1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Tether containing UBX domain for GLUT4
Alternative name(s):
Alveolar soft part sarcoma chromosomal region candidate gene 1 protein homolog
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Aspscr1
Synonyms:Tug
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1916188, Aspscr1

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, Membrane, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemovedBy similarity
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002498862 – 550Tether containing UBX domain for GLUT4Add BLAST549

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei2N-acetylalanineBy similarity1
Modified residuei193PhosphoserineCombined sources1
Modified residuei496PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q8VBT9

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q8VBT9

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8VBT9

PeptideAtlas

More...
PeptideAtlasi
Q8VBT9

PRoteomics IDEntifications database

More...
PRIDEi
Q8VBT9

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
281848 [Q8VBT9-1]
281849 [Q8VBT9-2]
281850 [Q8VBT9-3]

2D gel databases

REPRODUCTION-2DPAGE

More...
REPRODUCTION-2DPAGEi
Q8VBT9

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8VBT9

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q8VBT9

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q8VBT9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Ubiquitous.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000025142, Expressed in spermatid and 274 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8VBT9, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8VBT9, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with VCP.

Interacts with VCPKMT (By similarity).

Interacts with GLUT4.

By similarity1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
213125, 22 interactors

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000026135

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q8VBT9, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

1550
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Biological Magnetic Resonance Data Bank

More...
BMRBi
Q8VBT9

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8VBT9

Database of comparative protein structure models

More...
ModBasei
Search...

Protein Data Bank in Europe - Knowledge Base

More...
PDBe-KBi
Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...
EvolutionaryTracei
Q8VBT9

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini382 – 458UBXPROSITE-ProRule annotationAdd BLAST77

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni185 – 320DisorderedSequence analysisAdd BLAST136
Regioni313 – 376Interaction with GLUT41 PublicationAdd BLAST64
Regioni496 – 550DisorderedSequence analysisAdd BLAST55

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi190 – 213Polar residuesSequence analysisAdd BLAST24
Compositional biasi241 – 255Polar residuesSequence analysisAdd BLAST15
Compositional biasi272 – 291Polar residuesSequence analysisAdd BLAST20
Compositional biasi298 – 320Basic and acidic residuesSequence analysisAdd BLAST23

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2699, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000156853

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_025227_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8VBT9

Identification of Orthologs from Complete Genome Data

More...
OMAi
NNCVLEM

Database of Orthologous Groups

More...
OrthoDBi
1104599at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8VBT9

TreeFam database of animal gene trees

More...
TreeFami
TF320363

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR021569, TUG-UBL1
IPR029071, Ubiquitin-like_domsf
IPR001012, UBX_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF11470, TUG-UBL1, 1 hit
PF00789, UBX, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF54236, SSF54236, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50033, UBX, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 14 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q8VBT9-1) [UniParc]FASTAAdd to basket
Also known as: Long

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAAPAGGGGS AVSVLAPNGR RHTVKVTPST VLLQVLEDTC RRQDFNPSEY
60 70 80 90 100
DLKFQRTVLD LSLQWRFANL PNNAKLEMVP VSRSREGPEN IVRIAFQLDD
110 120 130 140 150
GSRLQDAFCS RQTLWELLSH FAQTRERLQQ LGEKTPVCVY MRNEVTGRAA
160 170 180 190 200
LQNTTLQSLG LTGGSATIRF VIKQCDTAGK QESIAVRSKA PGSPVSSLSA
210 220 230 240 250
DQASSSTLLP LNSGEFSRGD LNHEGDANTS GTGLEGGPKP TDAQTKQSTS
260 270 280 290 300
EPASAPFVPF SGGGQRLGGP SASLRPLTSP SANSSKSFSG PGGPSKPKKP
310 320 330 340 350
KPGEEPQQEP EPPVDRDPVV YHPDLEDLLQ PWPAEVPDEF FEVTVDDVRR
360 370 380 390 400
RLAQLKSERK RLEEAPLVTK AFREAQMKEK LERYPKVALR VLFPDRYILQ
410 420 430 440 450
GFFRPSETVG DLRDFVRSHL GNPELSFYLF IAPPKMVLDD HTLTLFQANL
460 470 480 490 500
FPAALVHFGA EEPTGLYLEP GLLEHTVSPS TADVLVARCM SRASGSPPLL
510 520 530 540 550
PAPDPVSLES EPIAEDGALG PPEPIQGTAQ PVKRSLGKVP KWLKLPASKR
Length:550
Mass (Da):59,796
Last modified:March 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iCC2EB6F7BD43E113
GO
Isoform 2 (identifier: Q8VBT9-2) [UniParc]FASTAAdd to basket
Also known as: Short

The sequence of this isoform differs from the canonical sequence as follows:
     1-77: Missing.

Show »
Length:473
Mass (Da):51,346
Checksum:i12A84C6FDA12F24A
GO
Isoform 3 (identifier: Q8VBT9-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-77: Missing.
     410-430: Missing.

Show »
Length:452
Mass (Da):48,881
Checksum:iBBD4C0CA283C4436
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 14 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F6S7C9F6S7C9_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
183Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A2ABZ8A2ABZ8_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
225Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A2AC05A2AC05_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
220Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A2AC02A2AC02_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
177Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A2AC03A2AC03_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
178Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F7CRQ2F7CRQ2_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
136Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F7B7K7F7B7K7_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
178Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A2AC01A2AC01_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
67Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A2AC00A2AC00_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
25Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9PWZ4E9PWZ4_MOUSE
Tether-containing UBX domain for GL...
Aspscr1
53Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
There are more potential isoformsShow all

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0205791 – 77Missing in isoform 2 and isoform 3. 2 PublicationsAdd BLAST77
Alternative sequenceiVSP_020580410 – 430Missing in isoform 3. 1 PublicationAdd BLAST21

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY349132 mRNA Translation: AAR01613.1
AY349133 mRNA Translation: AAR01614.1
AK004509 mRNA Translation: BAB23341.1
AK146061 mRNA Translation: BAE26870.1
AL663030 Genomic DNA No translation available.
BC019177 mRNA Translation: AAH19177.1
BC022115 mRNA Translation: AAH22115.1
BC031153 mRNA Translation: AAH31153.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS25751.1 [Q8VBT9-1]
CCDS25752.1 [Q8VBT9-2]
CCDS49008.1 [Q8VBT9-3]

NCBI Reference Sequences

More...
RefSeqi
NP_001157696.1, NM_001164224.1 [Q8VBT9-3]
NP_081153.1, NM_026877.2 [Q8VBT9-1]
NP_937866.1, NM_198223.2 [Q8VBT9-2]
XP_006534149.1, XM_006534086.3 [Q8VBT9-2]
XP_006534150.1, XM_006534087.3 [Q8VBT9-2]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000026135; ENSMUSP00000026135; ENSMUSG00000025142 [Q8VBT9-1]
ENSMUST00000103016; ENSMUSP00000099305; ENSMUSG00000025142 [Q8VBT9-2]
ENSMUST00000106158; ENSMUSP00000101764; ENSMUSG00000025142 [Q8VBT9-3]
ENSMUST00000106159; ENSMUSP00000101765; ENSMUSG00000025142 [Q8VBT9-2]
ENSMUST00000106160; ENSMUSP00000101766; ENSMUSG00000025142 [Q8VBT9-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
68938

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:68938

UCSC genome browser

More...
UCSCi
uc007mua.2, mouse [Q8VBT9-1]
uc007mub.1, mouse [Q8VBT9-3]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY349132 mRNA Translation: AAR01613.1
AY349133 mRNA Translation: AAR01614.1
AK004509 mRNA Translation: BAB23341.1
AK146061 mRNA Translation: BAE26870.1
AL663030 Genomic DNA No translation available.
BC019177 mRNA Translation: AAH19177.1
BC022115 mRNA Translation: AAH22115.1
BC031153 mRNA Translation: AAH31153.1
CCDSiCCDS25751.1 [Q8VBT9-1]
CCDS25752.1 [Q8VBT9-2]
CCDS49008.1 [Q8VBT9-3]
RefSeqiNP_001157696.1, NM_001164224.1 [Q8VBT9-3]
NP_081153.1, NM_026877.2 [Q8VBT9-1]
NP_937866.1, NM_198223.2 [Q8VBT9-2]
XP_006534149.1, XM_006534086.3 [Q8VBT9-2]
XP_006534150.1, XM_006534087.3 [Q8VBT9-2]

3D structure databases

Select the link destinations:

Protein Data Bank Europe

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PDBei

Protein Data Bank RCSB

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RCSB PDBi

Protein Data Bank Japan

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PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2AL3NMR-A1-90[»]
BMRBiQ8VBT9
SMRiQ8VBT9
ModBaseiSearch...
PDBe-KBiSearch...

Protein-protein interaction databases

BioGRIDi213125, 22 interactors
STRINGi10090.ENSMUSP00000026135

PTM databases

iPTMnetiQ8VBT9
PhosphoSitePlusiQ8VBT9
SwissPalmiQ8VBT9

2D gel databases

REPRODUCTION-2DPAGEiQ8VBT9

Proteomic databases

EPDiQ8VBT9
jPOSTiQ8VBT9
PaxDbiQ8VBT9
PeptideAtlasiQ8VBT9
PRIDEiQ8VBT9
ProteomicsDBi281848 [Q8VBT9-1]
281849 [Q8VBT9-2]
281850 [Q8VBT9-3]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

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Antibodypediai
19857, 292 antibodies

The DNASU plasmid repository

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DNASUi
68938

Genome annotation databases

EnsembliENSMUST00000026135; ENSMUSP00000026135; ENSMUSG00000025142 [Q8VBT9-1]
ENSMUST00000103016; ENSMUSP00000099305; ENSMUSG00000025142 [Q8VBT9-2]
ENSMUST00000106158; ENSMUSP00000101764; ENSMUSG00000025142 [Q8VBT9-3]
ENSMUST00000106159; ENSMUSP00000101765; ENSMUSG00000025142 [Q8VBT9-2]
ENSMUST00000106160; ENSMUSP00000101766; ENSMUSG00000025142 [Q8VBT9-3]
GeneIDi68938
KEGGimmu:68938
UCSCiuc007mua.2, mouse [Q8VBT9-1]
uc007mub.1, mouse [Q8VBT9-3]

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
79058
MGIiMGI:1916188, Aspscr1

Phylogenomic databases

eggNOGiKOG2699, Eukaryota
GeneTreeiENSGT00940000156853
HOGENOMiCLU_025227_0_0_1
InParanoidiQ8VBT9
OMAiNNCVLEM
OrthoDBi1104599at2759
PhylomeDBiQ8VBT9
TreeFamiTF320363

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
68938, 1 hit in 52 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

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ChiTaRSi
Aspscr1, mouse
EvolutionaryTraceiQ8VBT9

Protein Ontology

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PROi
PR:Q8VBT9
RNActiQ8VBT9, protein

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000025142, Expressed in spermatid and 274 other tissues
ExpressionAtlasiQ8VBT9, baseline and differential
GenevisibleiQ8VBT9, MM

Family and domain databases

InterProiView protein in InterPro
IPR021569, TUG-UBL1
IPR029071, Ubiquitin-like_domsf
IPR001012, UBX_dom
PfamiView protein in Pfam
PF11470, TUG-UBL1, 1 hit
PF00789, UBX, 1 hit
SUPFAMiSSF54236, SSF54236, 2 hits
PROSITEiView protein in PROSITE
PS50033, UBX, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiASPC1_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8VBT9
Secondary accession number(s): A2ABZ7
, A2AC06, Q3UKD1, Q6V7K5, Q9CT64
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 19, 2006
Last sequence update: March 1, 2002
Last modified: June 2, 2021
This is version 144 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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