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UniProtKB - Q8RQE8 (RPOC_THET8)

Entry version 121 (08 May 2019)
Sequence version 1 (01 Jun 2002)
Previous versions | rss
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Protein

DNA-directed RNA polymerase subunit beta'

Gene

rpoC

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

View the complete GO annotation on QuickGO ...

GO - Biological processi

View the complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionNucleotidyltransferase, Transferase
Biological processTranscription

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...BioCyci		TTHE300852:G1GKC-1821-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit beta'UniRule annotation (EC:2.7.7.6UniRule annotation)
Short name:
RNAP subunit beta'UniRule annotation
Alternative name(s):
RNA polymerase subunit beta'UniRule annotation
Transcriptase subunit beta'UniRule annotation
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:rpoCUniRule annotation
Ordered Locus Names:TTHA1812
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri300852 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteria › Deinococcus-Thermus › Deinococci › Thermales › Thermaceae › Thermus ›
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000532 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymerase

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

Chemistry databases

Drug and drug target database

More...DrugBanki		DB08226 Myxopyronin B
DB04788 Tagetitoxin

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000678201 – 1524DNA-directed RNA polymerase subunit beta'Add BLAST1524

Proteomic databases

PRoteomics IDEntifications database

More...PRIDEi		Q8RQE8

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

WithEntry#Exp.IntActNotes
rpoAQ5SHR64EBI-2106930,EBI-2106870

Protein-protein interaction databases

Database of interacting proteins

More...DIPi		DIP-47007N

Protein interaction database and analysis system

More...IntActi		Q8RQE8, 5 interactors

STRING: functional protein association networks

More...STRINGi		300852.55773194

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

Secondary structure

11524
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

Select the link destinations:

Protein Data Bank Europe

More...PDBei

Protein Data Bank RCSB

More...RCSB PDBi

Protein Data Bank Japan

More...PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1IW7X-ray2.60D/N1-1524[»]
1SMYX-ray2.70D/N1-1524[»]
1ZYRX-ray3.00D/N1-1524[»]
2A68X-ray2.50D/N1-1524[»]
2A69X-ray2.50D/N1-1524[»]
2A6EX-ray2.80D/N1-1524[»]
2A6HX-ray2.40D/N1-1524[»]
2BE5X-ray2.40D/N1-1524[»]
2CW0X-ray3.30D/N1-1524[»]
2O5IX-ray2.50D/N1-1524[»]
2O5JX-ray3.00D/N1-1524[»]
2PPBX-ray3.00D/N1-1524[»]
3AOHX-ray4.10D/I/N1-1524[»]
3AOIX-ray4.30D/I/N1-1524[»]
3DXJX-ray3.00D/N1-1524[»]
3EQLX-ray2.70D/N1-1524[»]
3WODX-ray3.60D1-1524[»]
4G7HX-ray2.90D/N1-1524[»]
4G7OX-ray2.99D/N1-1524[»]
4G7ZX-ray3.82D/N1-1524[»]
4GZYX-ray3.51D1-1524[»]
4GZZX-ray4.29D1-1524[»]
4MQ9X-ray3.35D1-1524[»]
4OINX-ray2.80D1-1524[»]
4OIOX-ray3.10D1-1524[»]
4OIPX-ray3.40D1-1524[»]
4OIQX-ray3.62D1-1524[»]
4OIRX-ray3.10D1-1524[»]
4Q4ZX-ray2.90D1-1524[»]
4Q5SX-ray3.00D1-1524[»]
4WQSX-ray4.31D/N1-1524[»]
4WQTX-ray4.40D/I/N1-1524[»]
5D4CX-ray3.28D/N1-1524[»]
5D4DX-ray3.00D/N1-1524[»]
5D4EX-ray3.08D/N1-1524[»]
5E17X-ray3.20D1-1524[»]
5E18X-ray3.30D1-1524[»]
5I2DX-ray4.41D/O1-1524[»]
5TMCX-ray2.71D1-1524[»]
5TMFX-ray3.00D1-1524[»]
5VO8X-ray3.30D1-1524[»]
5VOIX-ray2.80D1-1524[»]
5X21X-ray3.32D1-1524[»]
5X22X-ray3.35D/N1-1524[»]
5XJ0X-ray4.00D1-1524[»]
6ASGX-ray3.80D1-1524[»]

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q8RQE8

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

Miscellaneous databases

Relative evolutionary importance of amino acids within a protein sequence

More...EvolutionaryTracei		Q8RQE8

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the RNA polymerase beta' chain family.UniRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG4105D27 Bacteria
COG0086 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000218387

KEGG Orthology (KO)

More...KOi		K03046

Identification of Orthologs from Complete Genome Data

More...OMAi		QGVEIND

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q8RQE8

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.10.132.30, 1 hit
1.10.274.100, 1 hit

HAMAP database of protein families

More...HAMAPi		MF_01322 RNApol_bact_RpoC, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR012754 DNA-dir_RpoC_beta_prime
IPR000722 RNA_pol_asu
IPR006592 RNA_pol_N
IPR007080 RNA_pol_Rpb1_1
IPR007066 RNA_pol_Rpb1_3
IPR042102 RNA_pol_Rpb1_3_sf
IPR007083 RNA_pol_Rpb1_4
IPR007081 RNA_pol_Rpb1_5
IPR038120 Rpb1_funnel_sf

Pfam protein domain database

More...Pfami		View protein in Pfam
PF04997 RNA_pol_Rpb1_1, 2 hits
PF00623 RNA_pol_Rpb1_2, 1 hit
PF04983 RNA_pol_Rpb1_3, 1 hit
PF05000 RNA_pol_Rpb1_4, 1 hit
PF04998 RNA_pol_Rpb1_5, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM00663 RPOLA_N, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q8RQE8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKEVRKVRI ALASPEKIRS WSYGEVEKPE TINYRTLKPE RDGLFDERIF 
        60         70         80         90        100
GPIKDYECAC GKYKRQRFEG KVCERCGVEV TKSIVRRYRM GHIELATPAA 
       110        120        130        140        150
HIWFVKDVPS KIGTLLDLSA TELEQVLYFS KYIVLDPKGA ILNGVPVEKR 
       160        170        180        190        200
QLLTDEEYRE LRYGKQETYP LPPGVDALVK DGEEVVKGQE LAPGVVSRLD 
       210        220        230        240        250
GVALYRFPRR VRVEYVKKER AGLRLPLAAW VEKEAYKPGE ILAELPEPYL 
       260        270        280        290        300
FRAEEEGVVE LKELEEGAFL VLRREDEPVA TYFLPVGMTP LVVHGEIVEK 
       310        320        330        340        350
GQPLAEAKGL LRMPRQVRAA QVEAEEEGET VYLTLFLEWT EPKDYRVQPH 
       360        370        380        390        400
MNVVVPEGAR VEAGDKIVAA IDPEEEVIAE AEGVVHLHEP ASILVVKARV 
       410        420        430        440        450
YPFEDDVEVS TGDRVAPGDV LADGGKVKSD VYGRVEVDLV RNVVRVVESY 
       460        470        480        490        500
DIDARMGAEA IQQLLKELDL EALEKELLEE MKHPSRARRA KARKRLEVVR 
       510        520        530        540        550
AFLDSGNRPE WMILEAVPVL PPDLRPMVQV DGGRFATSDL NDLYRRLINR 
       560        570        580        590        600
NNRLKKLLAQ GAPEIIIRNE KRMLQEAVDA LLDNGRRGAP VTNPGSDRPL 
       610        620        630        640        650
RSLTDILSGK QGRFRQNLLG KRVDYSGRSV IVVGPQLKLH QCGLPKRMAL 
       660        670        680        690        700
ELFKPFLLKK MEEKGIAPNV KAARRMLERQ RDIKDEVWDA LEEVIHGKVV 
       710        720        730        740        750
LLNRAPTLHR LGIQAFQPVL VEGQSIQLHP LVCEAFNADF DGDQMAVHVP 
       760        770        780        790        800
LSSFAQAEAR IQMLSAHNLL SPASGEPLAK PSRDIILGLY YITQVRKEKK 
       810        820        830        840        850
GAGLEFATPE EALAAHERGE VALNAPIKVA GRETSVGRLK YVFANPDEAL 
       860        870        880        890        900
LAVAHGIVDL QDVVTVRYMG KRLETSPGRI LFARIVAEAV EDEKVAWELI 
       910        920        930        940        950
QLDVPQEKNS LKDLVYQAFL RLGMEKTARL LDALKYYGFT FSTTSGITIG 
       960        970        980        990       1000
IDDAVIPEEK KQYLEEADRK LLQIEQAYEM GFLTDRERYD QILQLWTETT 
      1010       1020       1030       1040       1050
EKVTQAVFKN FEENYPFNPL YVMAQSGARG NPQQIRQLCG LRGLMQKPSG 
      1060       1070       1080       1090       1100
ETFEVPVRSS FREGLTVLEY FISSHGARKG GADTALRTAD SGYLTRKLVD 
      1110       1120       1130       1140       1150
VTHEIVVREA DCGTTNYISV PLFQPDEVTR SLRLRKRADI EAGLYGRVLA 
      1160       1170       1180       1190       1200
REVEVLGVRL EEGRYLSMDD VHLLIKAAEA GEIQEVPVRS PLTCQTRYGV 
      1210       1220       1230       1240       1250
CQKCYGYDLS MARPVSIGEA VGIVAAQSIG EPGTQLTMRT FHTGGVAGAA 
      1260       1270       1280       1290       1300
DITQGLPRVI ELFEARRPKA KAVISEIDGV VRIEETEEKL SVFVESEGFS 
      1310       1320       1330       1340       1350
KEYKLPKEAR LLVKDGDYVE AGQPLTRGAI DPHQLLEAKG PEAVERYLVE 
      1360       1370       1380       1390       1400
EIQKVYRAQG VKLHDKHIEI VVRQMMKYVE VTDPGDSRLL EGQVLEKWDV 
      1410       1420       1430       1440       1450
EALNERLIAE GKTPVAWKPL LMGVTKSALS TKSWLSAASF QNTTHVLTEA 
      1460       1470       1480       1490       1500
AIAGKKDELI GLKENVILGR LIPAGTGSDF VRFTQVVDQK TLKAIEEARK 
      1510       1520 
EAVEAKERPA ARRGVKREQP GKQA
Length:1,524
Mass (Da):170,756
Last modified:June 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA7B335945B08E3A7
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AB083790 Genomic DNA Translation: BAB89401.1
AP008226 Genomic DNA Translation: BAD71635.1

NCBI Reference Sequences

More...RefSeqi		WP_011228934.1, NC_006461.1
YP_145078.1, NC_006461.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...EnsemblBacteriai		BAD71635; BAD71635; BAD71635

Database of genes from NCBI RefSeq genomes

More...GeneIDi		3169754

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		ttj:TTHA1812

Pathosystems Resource Integration Center (PATRIC)

More...PATRICi		fig|300852.9.peg.1783

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB083790 Genomic DNA Translation: BAB89401.1
AP008226 Genomic DNA Translation: BAD71635.1
RefSeqiWP_011228934.1, NC_006461.1
YP_145078.1, NC_006461.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1IW7X-ray2.60D/N1-1524[»]
1SMYX-ray2.70D/N1-1524[»]
1ZYRX-ray3.00D/N1-1524[»]
2A68X-ray2.50D/N1-1524[»]
2A69X-ray2.50D/N1-1524[»]
2A6EX-ray2.80D/N1-1524[»]
2A6HX-ray2.40D/N1-1524[»]
2BE5X-ray2.40D/N1-1524[»]
2CW0X-ray3.30D/N1-1524[»]
2O5IX-ray2.50D/N1-1524[»]
2O5JX-ray3.00D/N1-1524[»]
2PPBX-ray3.00D/N1-1524[»]
3AOHX-ray4.10D/I/N1-1524[»]
3AOIX-ray4.30D/I/N1-1524[»]
3DXJX-ray3.00D/N1-1524[»]
3EQLX-ray2.70D/N1-1524[»]
3WODX-ray3.60D1-1524[»]
4G7HX-ray2.90D/N1-1524[»]
4G7OX-ray2.99D/N1-1524[»]
4G7ZX-ray3.82D/N1-1524[»]
4GZYX-ray3.51D1-1524[»]
4GZZX-ray4.29D1-1524[»]
4MQ9X-ray3.35D1-1524[»]
4OINX-ray2.80D1-1524[»]
4OIOX-ray3.10D1-1524[»]
4OIPX-ray3.40D1-1524[»]
4OIQX-ray3.62D1-1524[»]
4OIRX-ray3.10D1-1524[»]
4Q4ZX-ray2.90D1-1524[»]
4Q5SX-ray3.00D1-1524[»]
4WQSX-ray4.31D/N1-1524[»]
4WQTX-ray4.40D/I/N1-1524[»]
5D4CX-ray3.28D/N1-1524[»]
5D4DX-ray3.00D/N1-1524[»]
5D4EX-ray3.08D/N1-1524[»]
5E17X-ray3.20D1-1524[»]
5E18X-ray3.30D1-1524[»]
5I2DX-ray4.41D/O1-1524[»]
5TMCX-ray2.71D1-1524[»]
5TMFX-ray3.00D1-1524[»]
5VO8X-ray3.30D1-1524[»]
5VOIX-ray2.80D1-1524[»]
5X21X-ray3.32D1-1524[»]
5X22X-ray3.35D/N1-1524[»]
5XJ0X-ray4.00D1-1524[»]
6ASGX-ray3.80D1-1524[»]
SMRiQ8RQE8
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-47007N
IntActiQ8RQE8, 5 interactors
STRINGi300852.55773194

Chemistry databases

DrugBankiDB08226 Myxopyronin B
DB04788 Tagetitoxin

Proteomic databases

PRIDEiQ8RQE8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD71635; BAD71635; BAD71635
GeneIDi3169754
KEGGittj:TTHA1812
PATRICifig|300852.9.peg.1783

Phylogenomic databases

eggNOGiENOG4105D27 Bacteria
COG0086 LUCA
HOGENOMiHOG000218387
KOiK03046
OMAiQGVEIND
PhylomeDBiQ8RQE8

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1821-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ8RQE8

Protein Ontology

More...PROi		PR:Q8RQE8

Family and domain databases

Gene3Di1.10.132.30, 1 hit
1.10.274.100, 1 hit
HAMAPiMF_01322 RNApol_bact_RpoC, 1 hit
InterProiView protein in InterPro
IPR012754 DNA-dir_RpoC_beta_prime
IPR000722 RNA_pol_asu
IPR006592 RNA_pol_N
IPR007080 RNA_pol_Rpb1_1
IPR007066 RNA_pol_Rpb1_3
IPR042102 RNA_pol_Rpb1_3_sf
IPR007083 RNA_pol_Rpb1_4
IPR007081 RNA_pol_Rpb1_5
IPR038120 Rpb1_funnel_sf
PfamiView protein in Pfam
PF04997 RNA_pol_Rpb1_1, 2 hits
PF00623 RNA_pol_Rpb1_2, 1 hit
PF04983 RNA_pol_Rpb1_3, 1 hit
PF05000 RNA_pol_Rpb1_4, 1 hit
PF04998 RNA_pol_Rpb1_5, 2 hits
SMARTiView protein in SMART
SM00663 RPOLA_N, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiRPOC_THET8
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8RQE8
Secondary accession number(s): Q5SHB8
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 16, 2004
Last sequence update: June 1, 2002
Last modified: May 8, 2019
This is version 121 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
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