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Entry version 130 (25 May 2022)
Sequence version 2 (03 Apr 2007)
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Protein

Coiled-coil domain-containing protein 80

Gene

Ccdc80

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Promotes cell adhesion and matrix assembly.

1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Coiled-coil domain-containing protein 80
Alternative name(s):
Up-regulated in BRS-3 deficient mouse
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Ccdc80
Synonyms:Urb
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1915146, Ccdc80

Eukaryotic Pathogen, Vector and Host Database Resources

More...
VEuPathDBi
HostDB:ENSMUSG00000022665

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Extracellular matrix, Secreted

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 22Sequence analysisAdd BLAST22
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000028241923 – 949Coiled-coil domain-containing protein 80Add BLAST927

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section specifies the position and type of each covalently attached glycan group (mono-, di-, or polysaccharide).<p><a href='/help/carbohyd' target='_top'>More...</a></p>Glycosylationi467N-linked (GlcNAc...) asparagineSequence analysis1
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM / Processing</a> section describes <strong>covalent linkages</strong> of various types formed <strong>between two proteins (interchain cross-links)</strong> or <strong>between two parts of the same protein (intrachain cross-links)</strong>, except the disulfide bonds that are annotated in the <a href="http://www.uniprot.org/manual/disulfid">'Disulfide bond'</a> subsection.<p><a href='/help/crosslnk' target='_top'>More...</a></p>Cross-linki544Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Cross-linki547Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Phosphorylated.1 Publication

Keywords - PTMi

Glycoprotein, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q8R2G6

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8R2G6

PeptideAtlas

More...
PeptideAtlasi
Q8R2G6

PRoteomics IDEntifications database

More...
PRIDEi
Q8R2G6

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
265719

PTM databases

GlyGen: Computational and Informatics Resources for Glycoscience

More...
GlyGeni
Q8R2G6, 1 site

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8R2G6

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q8R2G6

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Expressed in brain, stomach, colon, rectum, liver, lung, kidney, adipocytes and testis.

<p>This subsection of the 'Expression' section provides information on the expression of the gene product at various stages of a cell, tissue or organism development. By default, the information is derived from experiments at the mRNA level, unless specified 'at the protein level'.<p><a href='/help/developmental_stage' target='_top'>More...</a></p>Developmental stagei

Expressed in embryo at 7 dpc onwards. Expressed in rib, sternal cartilage, heart, kidney, leg muscles, intestine and limb at 7 dpc. Expressed in chondrocytes at 14.5 dpc. Expressed in cartilage at 14 dpc. Present in rib cartilage and choroid plexus epithelium at 16.5 dpc (at protein level).2 Publications

<p>This subsection of the 'Expression' section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

Up-regulated in adipose tissue of obese BRS-3-deficient mice.1 Publication

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000022665, Expressed in adipose tissue and 276 other tissues

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8R2G6, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Binds to various extracellular matrix proteins.

1 Publication

GO - Molecular functioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
212520, 2 interactors

Protein interaction database and analysis system

More...
IntActi
Q8R2G6, 1 interactor

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000097097

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q8R2G6, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

AlphaFold Protein Structure Database

More...
AlphaFoldDBi
Q8R2G6

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8R2G6

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni24 – 79DisorderedSequence analysisAdd BLAST56
Regioni112 – 132DisorderedSequence analysisAdd BLAST21
Regioni289 – 610DisorderedSequence analysisAdd BLAST322

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili554 – 587Sequence analysisAdd BLAST34

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi112 – 126Basic and acidic residuesSequence analysisAdd BLAST15
Compositional biasi307 – 328Basic and acidic residuesSequence analysisAdd BLAST22
Compositional biasi350 – 388Polar residuesSequence analysisAdd BLAST39
Compositional biasi433 – 449Polar residuesSequence analysisAdd BLAST17
Compositional biasi463 – 480Basic and acidic residuesSequence analysisAdd BLAST18
Compositional biasi508 – 532Polar residuesSequence analysisAdd BLAST25
Compositional biasi533 – 598Basic and acidic residuesSequence analysisAdd BLAST66

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CCDC80 family.Curated

Keywords - Domaini

Coiled coil, Signal

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG502QRG7, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000161699

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_013508_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8R2G6

Identification of Orthologs from Complete Genome Data

More...
OMAi
HQGYQEG

Database of Orthologous Groups

More...
OrthoDBi
244706at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8R2G6

TreeFam database of animal gene trees

More...
TreeFami
TF332926

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR025232, DUF4174

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF13778, DUF4174, 3 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

Q8R2G6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMWKMGPHFT TLLAMWLVCG SASHSPALDS DSHTGRKVPL VSPISSRSAR
60 70 80 90 100
YLRHTGRSGG VEKSTQEEPN PQPFQRRKSV PVLRLAHPTM RPPPSGINGV
110 120 130 140 150
PVRPEVRPIA RSSAREMVRD EGSSARTRML RFPSGSSSPN ILASFAGKNR
160 170 180 190 200
VWVISAPHAS EGYYRLMMSL LKDDVYCELA ERHIQQIVLF HQAGEEGGKV
210 220 230 240 250
RRITNEGQIL EQPLDPNLIP KLMSFLKLEK GKFSMVLLKK TLQVEERYPY
260 270 280 290 300
PVRLEAMYEV IDQGPIRRIE KIRQKGFVQK CKASGIEGHV VQEGNEGGGG
310 320 330 340 350
AGGTGLGGDK RKEDPRRTQV HPTREAPRKQ ATSKAATPQP PPTPRATTLP
360 370 380 390 400
PAPVTTATRA TSRVVTIAAR PTTTTAYPAT QRPWTSRLHP FSVSHRPPAT
410 420 430 440 450
AEVTTARGPS VSEQLYPLPR KEQQREKPQA TRRPSKATNY GSFTATPPPT
460 470 480 490 500
LWEVSARVVG TSRFRDNRTD KREHGHQDPN AVPGPHKPVK GKLPKKKDRI
510 520 530 540 550
LSNEYEDKYD LSQPTSSQGE EERQVDSVPS QNAKESKKLE KLEKPEKEKK
560 570 580 590 600
KKGKSAKQDK LLKSEKQAKK AEKKTKQEKD KNKKKKAGKT EQDDNQKPTA
610 620 630 640 650
KHLAPSPKKS VADLLGSFEG KRRLLLITTP KAENNMYVQQ RDEYLESFCK
660 670 680 690 700
MATRRISVVT IFGPVNNSSM KIDHFQLDNE KPMRVVDDDD LVDQHLISEL
710 720 730 740 750
RKEYGMTYDD FFMVLTDVDL RVKQYYEVPI AMKSVFDLID TFQSRIKDME
760 770 780 790 800
KQKKEGIACK EDKRQSLENF LSRFRWRRRL LVISAPNDED WAYSQQLSAL
810 820 830 840 850
NGQACNFGLR HITILKLLGV GEEVGGVLEL FPINGSSIVE REDVPAHLVK
860 870 880 890 900
DIRNYFQVSP EYFSMLLVGK DGNVKSWYPS PMWSMVIVYD LIDSMQLRRQ
910 920 930 940
EMAIQQSLGM RCPEDEYAGY GYHSYHQGYQ DGYQDDYRHH ESYHHGYPY
Length:949
Mass (Da):107,613
Last modified:April 3, 2007 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i25FB84D3BED55DF5
GO

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH58751 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAB26508 differs from that shown. Reason: Frameshift.Curated
The sequence BAB32018 differs from that shown. Reason: Frameshift.Curated
The sequence BAC27834 differs from that shown. Reason: Frameshift.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti34T → A in AAH58751 (PubMed:15489334).Curated1
Sequence conflicti34T → A in AAH96487 (PubMed:15489334).Curated1
Sequence conflicti296E → D in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti296E → D in AAH58751 (PubMed:15489334).Curated1
Sequence conflicti296E → D in AAH96487 (PubMed:15489334).Curated1
Sequence conflicti407R → M in BAC27834 (PubMed:16141072).Curated1
Sequence conflicti444T → S in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti444T → S in AAH58751 (PubMed:15489334).Curated1
Sequence conflicti444T → S in AAH96487 (PubMed:15489334).Curated1
Sequence conflicti456A → T in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti456A → T in AAH58751 (PubMed:15489334).Curated1
Sequence conflicti456A → T in AAH96487 (PubMed:15489334).Curated1
Sequence conflicti481A → V in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti481A → V in AAH58751 (PubMed:15489334).Curated1
Sequence conflicti481A → V in AAH96487 (PubMed:15489334).Curated1
Sequence conflicti507D → A in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti507D → A in AAH58751 (PubMed:15489334).Curated1
Sequence conflicti507D → A in AAH96487 (PubMed:15489334).Curated1
Sequence conflicti524Q → R in BAB85613 (PubMed:11812002).Curated1
Sequence conflicti575T → S in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti582N → K in AAH22704 (PubMed:15489334).Curated1
Sequence conflicti778R → T in BAB27498 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AB075019 mRNA Translation: BAB85613.1
AK009795 mRNA Translation: BAB26508.1 Sequence problems.
AK011256 mRNA Translation: BAB27498.1
AK020169 mRNA Translation: BAB32018.1 Frameshift.
AK032359 mRNA Translation: BAC27834.1 Frameshift.
AK132178 mRNA Translation: BAE21015.1
BC022704 mRNA Translation: AAH22704.1
BC058751 mRNA Translation: AAH58751.1 Different initiation.
BC096487 mRNA Translation: AAH96487.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS28192.1

Protein sequence database of the Protein Information Resource

More...
PIRi
JC7802

NCBI Reference Sequences

More...
RefSeqi
NP_080715.2, NM_026439.2
XP_006522561.1, XM_006522498.2
XP_006522562.1, XM_006522499.2
XP_006522563.1, XM_006522500.2
XP_006522564.1, XM_006522501.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000061050; ENSMUSP00000058752; ENSMUSG00000022665
ENSMUST00000099498; ENSMUSP00000097097; ENSMUSG00000022665

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
67896

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:67896

UCSC genome browser

More...
UCSCi
uc007zif.1, mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB075019 mRNA Translation: BAB85613.1
AK009795 mRNA Translation: BAB26508.1 Sequence problems.
AK011256 mRNA Translation: BAB27498.1
AK020169 mRNA Translation: BAB32018.1 Frameshift.
AK032359 mRNA Translation: BAC27834.1 Frameshift.
AK132178 mRNA Translation: BAE21015.1
BC022704 mRNA Translation: AAH22704.1
BC058751 mRNA Translation: AAH58751.1 Different initiation.
BC096487 mRNA Translation: AAH96487.1
CCDSiCCDS28192.1
PIRiJC7802
RefSeqiNP_080715.2, NM_026439.2
XP_006522561.1, XM_006522498.2
XP_006522562.1, XM_006522499.2
XP_006522563.1, XM_006522500.2
XP_006522564.1, XM_006522501.2

3D structure databases

AlphaFoldDBiQ8R2G6
SMRiQ8R2G6
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi212520, 2 interactors
IntActiQ8R2G6, 1 interactor
STRINGi10090.ENSMUSP00000097097

PTM databases

GlyGeniQ8R2G6, 1 site
iPTMnetiQ8R2G6
PhosphoSitePlusiQ8R2G6

Proteomic databases

MaxQBiQ8R2G6
PaxDbiQ8R2G6
PeptideAtlasiQ8R2G6
PRIDEiQ8R2G6
ProteomicsDBi265719

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
966, 105 antibodies from 17 providers

The DNASU plasmid repository

More...
DNASUi
67896

Genome annotation databases

EnsembliENSMUST00000061050; ENSMUSP00000058752; ENSMUSG00000022665
ENSMUST00000099498; ENSMUSP00000097097; ENSMUSG00000022665
GeneIDi67896
KEGGimmu:67896
UCSCiuc007zif.1, mouse

Organism-specific databases

Comparative Toxicogenomics Database

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CTDi
151887
MGIiMGI:1915146, Ccdc80
VEuPathDBiHostDB:ENSMUSG00000022665

Phylogenomic databases

eggNOGiENOG502QRG7, Eukaryota
GeneTreeiENSGT00940000161699
HOGENOMiCLU_013508_0_0_1
InParanoidiQ8R2G6
OMAiHQGYQEG
OrthoDBi244706at2759
PhylomeDBiQ8R2G6
TreeFamiTF332926

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

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BioGRID-ORCSi
67896, 3 hits in 71 CRISPR screens

Protein Ontology

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PROi
PR:Q8R2G6
RNActiQ8R2G6, protein

The Stanford Online Universal Resource for Clones and ESTs

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SOURCEi
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Gene expression databases

BgeeiENSMUSG00000022665, Expressed in adipose tissue and 276 other tissues
GenevisibleiQ8R2G6, MM

Family and domain databases

InterProiView protein in InterPro
IPR025232, DUF4174
PfamiView protein in Pfam
PF13778, DUF4174, 3 hits

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCCD80_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8R2G6
Secondary accession number(s): A1A4B0
, Q3V1Y4, Q4VA97, Q6PDE5, Q8C043, Q9CRM1, Q9CT39, Q9D6Z4
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: April 3, 2007
Last modified: May 25, 2022
This is version 130 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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