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Protein
Submitted name:

COLlagen

Gene

col-106

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
COLlagenImported
Gene namesi
Name:col-106Imported
ORF Names:CELE_Y77E11A.15Imported, Y77E11A.15Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiY77E11A.15 ; CE26306 ; WBGene00000680 ; col-106

Subcellular locationi

PTM / Processingi

Proteomic databases

EPDiQ8MXT6
PaxDbiQ8MXT6
PeptideAtlasiQ8MXT6

Expressioni

Gene expression databases

BgeeiWBGene00000680 Expressed in 4 organ(s), highest expression level in material anatomical entity

Interactioni

Protein-protein interaction databases

DIPiDIP-26152N
IntActiQ8MXT6, 1 interactor
STRINGi6239.Y77E11A.15.1

Structurei

3D structure databases

ProteinModelPortaliQ8MXT6
SMRiQ8MXT6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 55Col_cuticle_NInterPro annotationAdd BLAST53

Keywords - Domaini

CollagenImported

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00910000144616
HOGENOMiHOG000085656
InParanoidiQ8MXT6
OMAiRKNGAPE
OrthoDBiEOG091G0ZGG

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
IPR008160 Collagen
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
PF01391 Collagen, 1 hit
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit

Sequencei

Sequence statusi: Complete.

Q8MXT6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGAFGTLACA SATVLTIGSL ATMCLIVSDI NGLYNDVMEE SRTTREVADD
60 70 80 90 100
AWEELLRKNG APEASRAAVT AMLFGRNKRN AQCNCGAKSK GCPAGPPGPR
110 120 130 140 150
GPNGAPGLDG PDGLDGPDGH PGYAAAIKEN FGGACISCPA GPAGPPGPDG
160 170 180 190 200
CAGEPGTDGA PGEDGQNGAP GSPGGPGETG PQGHQGKPGR AGPRGPPGAK
210 220 230 240 250
GQTYLPGSAG HPGNSGRRGP PGPPGANGKN GKQGADGIPG AGGAPGQHGV
260 270 280 290
PGVDGSDGAP GEDAAPGGDA AYCPCPTRSV AVEAAPSQAE QIYKTH
Length:296
Mass (Da):28,529
Last modified:October 1, 2002 - v1
Checksum:i9AA9696031B7A805
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CCD72602.1
RefSeqiNP_741318.1, NM_171268.5
UniGeneiCel.6254

Genome annotation databases

EnsemblMetazoaiY77E11A.15; Y77E11A.15; WBGene00000680
GeneIDi176955
KEGGicel:CELE_Y77E11A.15
UCSCiY77E11A.15 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CCD72602.1
RefSeqiNP_741318.1, NM_171268.5
UniGeneiCel.6254

3D structure databases

ProteinModelPortaliQ8MXT6
SMRiQ8MXT6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-26152N
IntActiQ8MXT6, 1 interactor
STRINGi6239.Y77E11A.15.1

Proteomic databases

EPDiQ8MXT6
PaxDbiQ8MXT6
PeptideAtlasiQ8MXT6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiY77E11A.15; Y77E11A.15; WBGene00000680
GeneIDi176955
KEGGicel:CELE_Y77E11A.15
UCSCiY77E11A.15 c. elegans

Organism-specific databases

CTDi176955
WormBaseiY77E11A.15 ; CE26306 ; WBGene00000680 ; col-106

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00910000144616
HOGENOMiHOG000085656
InParanoidiQ8MXT6
OMAiRKNGAPE
OrthoDBiEOG091G0ZGG

Gene expression databases

BgeeiWBGene00000680 Expressed in 4 organ(s), highest expression level in material anatomical entity

Family and domain databases

InterProiView protein in InterPro
IPR002486 Col_cuticle_N
IPR008160 Collagen
PfamiView protein in Pfam
PF01484 Col_cuticle_N, 1 hit
PF01391 Collagen, 1 hit
SMARTiView protein in SMART
SM01088 Col_cuticle_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ8MXT6_CAEEL
AccessioniPrimary (citable) accession number: Q8MXT6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: November 7, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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