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Protein

ABC transporter E family member 2

Gene

ABCE2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi110 – 117ATPPROSITE-ProRule annotation8
Nucleotide bindingi381 – 388ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport
Ligand4Fe-4S, ATP-binding, Iron, Iron-sulfur, Metal-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter E family member 2
Short name:
ABC transporter ABCE.2
Short name:
AtABCE2
Alternative name(s):
RNase L inhibitor-like protein 2
Short name:
AtRLI2
Short name:
AthaRLI2
Gene namesi
Name:ABCE2
Synonyms:RLI2
Ordered Locus Names:At4g19210
ORF Names:T18B16.180
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G19210
TAIRilocus:2134761 AT4G19210

Subcellular locationi

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003791381 – 605ABC transporter E family member 2Add BLAST605

Proteomic databases

PaxDbiQ8LPJ4
PRIDEiQ8LPJ4

PTM databases

iPTMnetiQ8LPJ4

Expressioni

Tissue specificityi

Expressed in roots, stems, leaves, flowers and siliques.1 Publication

Inductioni

In plants undergoing RNA interference.1 Publication

Gene expression databases

ExpressionAtlasiQ8LPJ4 baseline and differential
GenevisibleiQ8LPJ4 AT

Interactioni

Protein-protein interaction databases

BioGridi12954, 8 interactors
IntActiQ8LPJ4, 8 interactors
STRINGi3702.AT4G19210.1

Structurei

3D structure databases

ProteinModelPortaliQ8LPJ4
SMRiQ8LPJ4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini46 – 754Fe-4S ferredoxin-typePROSITE-ProRule annotationAdd BLAST30
Domaini70 – 315ABC transporter 1PROSITE-ProRule annotationAdd BLAST246
Domaini344 – 568ABC transporter 2PROSITE-ProRule annotationAdd BLAST225

Sequence similaritiesi

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG0063 Eukaryota
COG1245 LUCA
HOGENOMiHOG000222803
InParanoidiQ8LPJ4
KOiK06174
OMAiTGCNTFL
OrthoDBiEOG093604PR
PhylomeDBiQ8LPJ4

Family and domain databases

CDDicd03236 ABC_RNaseL_inhibitor_domain1, 1 hit
InterProiView protein in InterPro
IPR017896 4Fe4S_Fe-S-bd
IPR017900 4Fe4S_Fe_S_CS
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
IPR013283 RLI1
IPR034348 RLI_dom_1
IPR007209 RNaseL-inhib_metal-bd_dom
PANTHERiPTHR19248 PTHR19248, 1 hit
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
PF00037 Fer4, 1 hit
PF04068 RLI, 1 hit
PRINTSiPR01868 ABCEFAMILY
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00198 4FE4S_FER_1, 1 hit
PS51379 4FE4S_FER_2, 1 hit
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q8LPJ4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADRLTRIAI VSSDRCKPKK CRQECKKSCP VVKTGKLCIE VTVGSKLAFI
60 70 80 90 100
SEELCIGCGI CVKKCPFEAI QIINLPRDLE KDTTHRYGAN TFKLHRLPVP
110 120 130 140 150
RPGQVLGLVG TNGIGKSTAL KILAGKLKPN LGRFTSPPDW QEILTHFRGS
160 170 180 190 200
ELQNYFTRIL EDNLKAIIKP QYVDHIPRAV KGNVGEVLDQ KDERDKKAEL
210 220 230 240 250
CADLELNQVI DRDVENLSGG ELQRFAIAVV AIQNAEIYMF DEPSSYLDVK
260 270 280 290 300
QRLKAAQVVR SLLRPNSYVI VVEHDLSVLD YLSDFICCLY GKPGAYGVVT
310 320 330 340 350
LPFSVREGIN IFLAGFVPTE NLRFRDESLT FKVAETPQES AEEIQSYARY
360 370 380 390 400
KYPTMTKTQG NFRLRVSEGE FTDSQIIVML GENGTGKTTF IRMLAGLLKP
410 420 430 440 450
DDTEGPDREI PEFNVSYKPQ KISPKFQNSV RHLLHQKIRD SYMHPQFMSD
460 470 480 490 500
VMKPLQIEQL MDQEVVNLSG GELQRVALTL CLGKPADIYL IDEPSAYLDS
510 520 530 540 550
EQRIVASKVI KRFILHAKKT AFVVEHDFIM ATYLADRVIV YEGQPSIDCT
560 570 580 590 600
ANCPQSLLSG MNLFLSHLNI TFRRDPTNFR PRINKLESTK DREQKSAGSY

YYLDD
Length:605
Mass (Da):68,390
Last modified:October 1, 2002 - v1
Checksum:i8CE4ADCB3023B4C7
GO

Sequence cautioni

The sequence CAA16710 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence CAB78923 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL021687 Genomic DNA Translation: CAA16710.1 Sequence problems.
AL161550 Genomic DNA Translation: CAB78923.1 Sequence problems.
CP002687 Genomic DNA Translation: AEE84160.1
AY099697 mRNA Translation: AAM20548.1
BT000298 mRNA Translation: AAN15617.1
AK221885 mRNA Translation: BAD94217.1
AK226939 mRNA Translation: BAE99009.1
PIRiT04442
RefSeqiNP_193656.2, NM_118041.5
UniGeneiAt.24747
At.43389

Genome annotation databases

EnsemblPlantsiAT4G19210.1; AT4G19210.1; AT4G19210
GeneIDi827661
GrameneiAT4G19210.1; AT4G19210.1; AT4G19210
KEGGiath:AT4G19210

Similar proteinsi

Entry informationi

Entry nameiAB2E_ARATH
AccessioniPrimary (citable) accession number: Q8LPJ4
Secondary accession number(s): O49679, Q56WZ4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 7, 2009
Last sequence update: October 1, 2002
Last modified: April 25, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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