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Protein

Glycine--tRNA ligase, chloroplastic/mitochondrial 2

Gene

EDD1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs.By similarity

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei513SubstrateBy similarity1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi589 – 596ATPBy similarity8
Nucleotide bindingi619 – 624ATPBy similarity6
Nucleotide bindingi744 – 745ATPBy similarity2
Nucleotide bindingi859 – 862ATPBy similarity4

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

  • embryo development ending in seed dormancy Source: TAIR
  • glycyl-tRNA aminoacylation Source: TAIR
  • regulation of embryonic development Source: TAIR

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BRENDA Comprehensive Enzyme Information System

More...
BRENDAi
6.1.1.14 399

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Glycine--tRNA ligase, chloroplastic/mitochondrial 2Curated (EC:6.1.1.141 Publication)
Alternative name(s):
Glycyl-tRNA synthetase 21 Publication
Short name:
GlyRS-21 Publication
Protein EMBRYO-DEFECTIVE-DEVELOPMENT 11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:EDD11 Publication
Ordered Locus Names:At3g48110
ORF Names:T17F15.20
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT3G48110

The Arabidopsis Information Resource

More...
TAIRi
locus:2097885 AT3G48110

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Mitochondrion, Plastid

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Embryo defective. Developmental arrest of the embryo between the globular and heart stages (PubMed:9707529). Plants with partial loss of EDD1 display changes in patterning of margin and distal regions of leaves (PubMed:22791832).2 Publications

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a transit peptide.<p><a href='/help/transit' target='_top'>More...</a></p>Transit peptidei1 – 50Chloroplast and mitochondrion1 PublicationAdd BLAST50
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_000004601751 – 1067Glycine--tRNA ligase, chloroplastic/mitochondrial 2CuratedAdd BLAST1017

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8L785

PRoteomics IDEntifications database

More...
PRIDEi
Q8L785

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8L785

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8L785 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8L785 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Homodimer.By similarity

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
3702.AT3G48110.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
Q8L785

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8L785

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni624 – 628Substrate bindingBy similarity5
Regioni855 – 859Substrate bindingBy similarity5

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IHAC Eukaryota
COG0751 LUCA
COG0752 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000264303

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8L785

KEGG Orthology (KO)

More...
KOi
K14164

Identification of Orthologs from Complete Genome Data

More...
OMAi
KENQRYF

Database of Orthologous Groups

More...
OrthoDBi
EOG093600TZ

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8L785

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00733 GlyRS_alpha_core, 1 hit

HAMAP database of protein families

More...
HAMAPi
MF_00254 Gly_tRNA_synth_alpha, 1 hit
MF_00255 Gly_tRNA_synth_beta, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR015944 Gly-tRNA-synth_bsu
IPR006194 Gly-tRNA-synth_heterodimer
IPR002310 Gly-tRNA_ligase_asu

The PANTHER Classification System

More...
PANTHERi
PTHR30075 PTHR30075, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF02091 tRNA-synt_2e, 1 hit
PF02092 tRNA_synt_2f, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR01044 TRNASYNTHGA

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR00388 glyQ, 1 hit
TIGR00211 glyS, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50861 AA_TRNA_LIGASE_II_GLYAB, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q8L785-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAILHFSLPL IVSFLRPHAS PRFFLLPRSL SQSPFLSRRR FHRTSAVSSA
60 70 80 90 100
AVHHQSYRNP DDDVTRAVSV PTFQQAIQRL QEYWASVGCA VMQPSNTEVG
110 120 130 140 150
AGTMNPCTFL RVLGPEPWNV AYVEPSIRPD DSRYGENPNR LQRHTQFQVI
160 170 180 190 200
LKPDPGNSQQ LFINSLSALG IDVTAHDIRF VEDNWESPVL GAWGLGWEIW
210 220 230 240 250
MDGMEITQFT YFQQAGSLPL SPVSVEITYG LERIIMLLQE VDHFKKILYA
260 270 280 290 300
DGITYGELFL ENEKEMSSYY LEHASVDRLQ KHFDYFDEEA RSLLALGLPI
310 320 330 340 350
PAYDQLLKTS HAFNILDARG FIGVTERARY FGRMRSLARQ CAQLWLATRE
360 370 380 390 400
SLGHPLGVAS EPVPPVCHRA ALEKVAEKVS EDPRSFIIEI GTEEMPPQDV
410 420 430 440 450
INASEQLRVL VLELLENQRL RHGAVKAFGT PRRLVVLVDA MSSKQLEEEV
460 470 480 490 500
EVRGPPASKA FDDEGNPTKA AEGFSRRYGV PLEKLYRKVS GKTEYVHARV
510 520 530 540 550
TEPARLALEV LSEDLPGILA KISFPKSMRW NSSVMFSRPI RWVMALHGDL
560 570 580 590 600
VVPFSFAGIS SGNVSCGLRN TASASLLVQN AESYEDTMRN SGINIEIEER
610 620 630 640 650
KKIILEKSNA LAKSVSGRLV VPQNLLNEVA NLVEAPVPLI GKFKESFLEL
660 670 680 690 700
PEELLTIVMQ KHQKYFSIID ESGQLLPYFI AVANGAINED VVKKGNEAVL
710 720 730 740 750
RARYEDAKFF YEVDTRKRFS EFRDQLQGIL FHEKLGTMLD KMNRLKKMVS
760 770 780 790 800
KLCLALKIDE DLLPVVEDAA SLAMSDLATA VVTEFTALSG IMARHYALRD
810 820 830 840 850
GYSEQIAEAL LEITLPRFSG DVIPKTDAGM VLAIGDRLDS LVGLFAAGCQ
860 870 880 890 900
PSSTNDPFGL RRISYGLVQI LVEKDKNVNF KRVLELAASV QPTKVEANTV
910 920 930 940 950
EDVYQFVTRR LEQLLVDNGV SPEVVRSVLA ERGNNPCLAA RTAYKTEKLS
960 970 980 990 1000
KGEMFPKIVE AYSRPTRIVR GKDVGVGVEV DENAFETPQE RTLWSTYTSI
1010 1020 1030 1040 1050
KDRIHTGIEI EDFTEISMQL VEPLEDFFNN VFVMVEEERV RKNRLALLNN
1060
IANLPKGVID LSFLPGF
Length:1,067
Mass (Da):119,773
Last modified:October 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE2F0574F1F019493
GO
Isoform 2 (identifier: Q8L785-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1035-1035: Missing.

Note: Derived from EST data. May be due to a competing donor splice site. No experimental confirmation available.
Show »
Length:1,066
Mass (Da):119,674
Checksum:iB8DE160BABC8A51D
GO

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence CAB41128 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti336S → T in CAA05843 (PubMed:9707529).Curated1
Sequence conflicti535M → I in CAA05843 (PubMed:9707529).Curated1
Sequence conflicti616S → N in CAA05843 (PubMed:9707529).Curated1
Sequence conflicti893T → R in CAA05843 (PubMed:9707529).Curated1
Sequence conflicti1012D → E in CAA05843 (PubMed:9707529).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting. The information stored in this subsection is used to automatically construct alternative protein sequence(s) for display.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0180981035Missing in isoform 2. Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AJ003069 mRNA Translation: CAA05843.1
AL049658 Genomic DNA Translation: CAB41128.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE78369.1
AY136413 mRNA Translation: AAM97079.1
BT012191 mRNA Translation: AAS76678.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T06672
T48850

NCBI Reference Sequences

More...
RefSeqi
NP_190394.3, NM_114680.4 [Q8L785-1]

UniGene gene-oriented nucleotide sequence clusters

More...
UniGenei
At.22692

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT3G48110.1; AT3G48110.1; AT3G48110 [Q8L785-1]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
823966

Gramene; a comparative resource for plants

More...
Gramenei
AT3G48110.1; AT3G48110.1; AT3G48110 [Q8L785-1]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT3G48110

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ003069 mRNA Translation: CAA05843.1
AL049658 Genomic DNA Translation: CAB41128.1 Sequence problems.
CP002686 Genomic DNA Translation: AEE78369.1
AY136413 mRNA Translation: AAM97079.1
BT012191 mRNA Translation: AAS76678.1
PIRiT06672
T48850
RefSeqiNP_190394.3, NM_114680.4 [Q8L785-1]
UniGeneiAt.22692

3D structure databases

ProteinModelPortaliQ8L785
SMRiQ8L785
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G48110.1

PTM databases

iPTMnetiQ8L785

Proteomic databases

PaxDbiQ8L785
PRIDEiQ8L785

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G48110.1; AT3G48110.1; AT3G48110 [Q8L785-1]
GeneIDi823966
GrameneiAT3G48110.1; AT3G48110.1; AT3G48110 [Q8L785-1]
KEGGiath:AT3G48110

Organism-specific databases

AraportiAT3G48110
TAIRilocus:2097885 AT3G48110

Phylogenomic databases

eggNOGiENOG410IHAC Eukaryota
COG0751 LUCA
COG0752 LUCA
HOGENOMiHOG000264303
InParanoidiQ8L785
KOiK14164
OMAiKENQRYF
OrthoDBiEOG093600TZ
PhylomeDBiQ8L785

Enzyme and pathway databases

BRENDAi6.1.1.14 399

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q8L785

Gene expression databases

ExpressionAtlasiQ8L785 baseline and differential
GenevisibleiQ8L785 AT

Family and domain databases

CDDicd00733 GlyRS_alpha_core, 1 hit
HAMAPiMF_00254 Gly_tRNA_synth_alpha, 1 hit
MF_00255 Gly_tRNA_synth_beta, 1 hit
InterProiView protein in InterPro
IPR015944 Gly-tRNA-synth_bsu
IPR006194 Gly-tRNA-synth_heterodimer
IPR002310 Gly-tRNA_ligase_asu
PANTHERiPTHR30075 PTHR30075, 1 hit
PfamiView protein in Pfam
PF02091 tRNA-synt_2e, 1 hit
PF02092 tRNA_synt_2f, 1 hit
PRINTSiPR01044 TRNASYNTHGA
TIGRFAMsiTIGR00388 glyQ, 1 hit
TIGR00211 glyS, 1 hit
PROSITEiView protein in PROSITE
PS50861 AA_TRNA_LIGASE_II_GLYAB, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSYGM2_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8L785
Secondary accession number(s): O23150, Q9SU73
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 7, 2006
Last sequence update: October 1, 2002
Last modified: December 5, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  3. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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