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Entry version 114 (18 Sep 2019)
Sequence version 1 (01 Oct 2002)
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Protein

Cullin-associated NEDD8-dissociated protein 1

Gene

CAND1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Key assembly factor of SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complexes that promotes the exchange of the substrate-recognition F-box subunit in SCF complexes, thereby playing a key role in the cellular repertoire of SCF complexes. Acts as a F-box protein exchange factor (By similarity). Required for SCF(TIR1) function. Modulates SCF(TIR1) function through its interactions with the CUL1 subunit. Represses photomorphogenesis by promoting HY5 degradation in darkness.By similarity5 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processTranscription, Transcription regulation, Ubl conjugation pathway

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Cullin-associated NEDD8-dissociated protein 1
Alternative name(s):
Cullin-associated and neddylation-dissociated protein 1
Short name:
AtCAND1
Protein ENHANCER OF TIR1-1 AUXIN RESISTANCE 2
Protein HEMIVENATA
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:CAND1
Synonyms:ETA2, HVE
Ordered Locus Names:At2g02560
ORF Names:T8K22.14
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT2G02560

The Arabidopsis Information Resource

More...
TAIRi
locus:2065279 AT2G02560

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the disease(s) and phenotype(s) associated with a protein.<p><a href='/help/pathology_and_biotech_section' target='_top'>More...</a></p>Pathology & Biotechi

<p>This subsection of the ‘Pathology and Biotech’ section describes the in vivo effects caused by ablation of the gene (or one or more transcripts) coding for the protein described in the entry. This includes gene knockout and knockdown, provided experiments have been performed in the context of a whole organism or a specific tissue, and not at the single-cell level.<p><a href='/help/disruption_phenotype' target='_top'>More...</a></p>Disruption phenotypei

Developmental phenotypes such as dwarfism, organ defects, short inflorescences and mishaped leaves. Low fertility and reduced responses to hormones.3 Publications

Mutagenesis

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/manual/pathology_and_biotech_section">'Pathology and Biotech'</a> section describes the effect of the experimental mutation of one or more amino acid(s) on the biological properties of the protein.<p><a href='/help/mutagen' target='_top'>More...</a></p>Mutagenesisi1069G → D in eta2-1; reduced response to auxin. 1 Publication1

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/ptm_processing_section">PTM / Processing</a> section indicates that the initiator methionine is cleaved from the mature protein.<p><a href='/help/init_met' target='_top'>More...</a></p>Initiator methionineiRemovedCombined sources
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003968592 – 1219Cullin-associated NEDD8-dissociated protein 1Add BLAST1218

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei2N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8L5Y6

PRoteomics IDEntifications database

More...
PRIDEi
Q8L5Y6

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8L5Y6

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q8L5Y6

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Highly expressed in roots. Expressed in stems, flowers and siliques.1 Publication

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8L5Y6 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8L5Y6 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with CUL1 and CUL4. Binds unneddylated CUL1, but cannot bind CUL1 once it has been neddylated.

3 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction_section%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="http://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated on a monthly basis. Each binary interaction is displayed on a separate line.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
188, 10 interactors

Database of interacting proteins

More...
DIPi
DIP-33719N

Protein interaction database and analysis system

More...
IntActi
Q8L5Y6, 12 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT2G02560.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8L5Y6

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati44 – 81HEAT 1Add BLAST38
Repeati83 – 119HEAT 2Add BLAST37
Repeati209 – 244HEAT 3Add BLAST36
Repeati248 – 288HEAT 4Add BLAST41
Repeati327 – 363HEAT 5Add BLAST37
Repeati367 – 404HEAT 6Add BLAST38
Repeati423 – 460HEAT 7Add BLAST38
Repeati464 – 503HEAT 8Add BLAST40
Repeati599 – 636HEAT 9Add BLAST38
Repeati639 – 676HEAT 10Add BLAST38
Repeati808 – 848HEAT 11Add BLAST41
Repeati850 – 883HEAT 12Add BLAST34
Repeati927 – 964HEAT 13Add BLAST38
Repeati966 – 998HEAT 14Add BLAST33
Repeati1002 – 1039HEAT 15Add BLAST38
Repeati1043 – 1079HEAT 16Add BLAST37
Repeati1101 – 1137HEAT 17Add BLAST37
Repeati1141 – 1180HEAT 18Add BLAST40

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the CAND family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1824 Eukaryota
ENOG410XPK4 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000264713

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8L5Y6

KEGG Orthology (KO)

More...
KOi
K17263

Identification of Orthologs from Complete Genome Data

More...
OMAi
QNLAIKC

Database of Orthologous Groups

More...
OrthoDBi
194023at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8L5Y6

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR016024 ARM-type_fold
IPR039852 CAND1/CAND2
IPR013932 TATA-bd_TIP120

The PANTHER Classification System

More...
PANTHERi
PTHR12696 PTHR12696, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF08623 TIP120, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371 SSF48371, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is in its mature form or if it represents the precursor.<p><a href='/help/sequence_processing' target='_top'>More...</a></p>Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 <p>This subsection of the ‘Sequence’ section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: Q8L5Y6-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MANLQVSGIL EKFQMTGKDK DYRYMATSDL LNELNKDSFK IDLDLEVRLS
60 70 80 90 100
SIILQQLDDV AGDVSGLAVK CLAPLVKKVG EERIVEMTNK LCDKLLHGKD
110 120 130 140 150
QHRDTASIAL RTVVAQIAPT LAPSILVTLT PQMIGGISGQ GMSSGIKCEC
160 170 180 190 200
LEIMCDVVQK YGSLMTDDHE KLLNTLLLQL GCNQATVRKK TVTCIASLAS
210 220 230 240 250
SLSDDLLAKA TVEVVKNLSN RNAKSEITRT NIQMIGALCR AVGYRFGTHL
260 270 280 290 300
GNTVPVLINY CTSASENDEE LREYSLQALE SFLLRCPRDI SPYCDEILNL
310 320 330 340 350
TLEYISYDPN FTDNMEEDTD NETLEDEEDD ESANEYTDDE DASWKVRRAA
360 370 380 390 400
AKCLAGLIVS RSEMLTKVYQ EACPKLIDRF KEREENVKMD VFNTFIDLLR
410 420 430 440 450
QTGNVTKGQT DTDESSPKWL LKQEVSKIVK SINRQLREKS VKTKVGAFSV
460 470 480 490 500
LRELVVVLPD CLADHIGSLV PGIERALNDK SSTSNLKIEA LVFTKLVLAS
510 520 530 540 550
HAPPVFHPYI KALSSPVLAA VGERYYKVTA EALRVCGELV RVVRPSTAGM
560 570 580 590 600
GFDFKPFVHP IYNAIMSRLT NQDQDQEVKE CAITCMGLVI STFGDQLRAE
610 620 630 640 650
LPSCLPVLVD RMGNEITRLT AVKAFSVIAT SPLHINLSCV LDHLIAELTG
660 670 680 690 700
FLRKANRVLR QATLITMNTL VTAYGDKIGS EAYEVILVEL SSLISVSDLH
710 720 730 740 750
MTALALELCC TLMTGKSCSE NISLAVRNKV LPQALTLVKS PLLQGQALLD
760 770 780 790 800
LQKFFEALVY HANTSFYTLL ESLLSCAKPS PQSGGVPKQA LYSIAQCVAV
810 820 830 840 850
LCLAAGDKNC SSTVKMLMEI LKDDSGTNSA KQHLALLSLG EIGRRKDLSA
860 870 880 890 900
HAGIETIVIE SFQSPFEEIK SAASYALGNI AVGNLSNYLP FILDQIDNQQ
910 920 930 940 950
KKQYILLHSL KEVIVRQSVD KADFQNSSVE KILALLFNHC ESEEEGVRNV
960 970 980 990 1000
VAECLGKMAL IEPEKLVPAL QVRTTSPAAF TRATVVTAVK YSVVERPEKL
1010 1020 1030 1040 1050
DEIIFPQISS FLMLIKDGDR HVRRAAVSAL STFAHYKPNL IKGLLPELLP
1060 1070 1080 1090 1100
LLYDQTVIKK ELIRTVDLGP FKHVVDDGLE LRKAAFECVF TLVDSCLDQV
1110 1120 1130 1140 1150
NPSSFIVPFL KSGLEDHYDL KMLCHLILSL LADKCPSAVL AVLDSLVEPL
1160 1170 1180 1190 1200
HKTISFKPKQ DAVKQEHDRN EDMIRSALRA ISSLDRINGV DYSHKFKGLM
1210
GDMKRSVPLW EKFQTIRNE
Length:1,219
Mass (Da):134,897
Last modified:October 1, 2002 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iB0F5769754DE6040
GO
Isoform 2 (identifier: Q8L5Y6-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     13-14: Missing.

Note: Derived from EST data. No experimental confirmation available.
Show »
Length:1,217
Mass (Da):134,622
Checksum:iAA23DAE4A94EE1EA
GO

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_03962413 – 14Missing in isoform 2. Curated2

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AC004136 Genomic DNA Translation: AAC18930.1
CP002685 Genomic DNA Translation: AEC05595.1
CP002685 Genomic DNA Translation: AEC05596.1
AY099857 mRNA Translation: AAM20708.1
BT010134 mRNA Translation: AAQ22603.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T00607

NCBI Reference Sequences

More...
RefSeqi
NP_001030954.1, NM_001035877.2 [Q8L5Y6-2]
NP_178360.2, NM_126312.3 [Q8L5Y6-1]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT2G02560.1; AT2G02560.1; AT2G02560 [Q8L5Y6-1]
AT2G02560.2; AT2G02560.2; AT2G02560 [Q8L5Y6-2]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
814786

Gramene; a comparative resource for plants

More...
Gramenei
AT2G02560.1; AT2G02560.1; AT2G02560 [Q8L5Y6-1]
AT2G02560.2; AT2G02560.2; AT2G02560 [Q8L5Y6-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT2G02560

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004136 Genomic DNA Translation: AAC18930.1
CP002685 Genomic DNA Translation: AEC05595.1
CP002685 Genomic DNA Translation: AEC05596.1
AY099857 mRNA Translation: AAM20708.1
BT010134 mRNA Translation: AAQ22603.1
PIRiT00607
RefSeqiNP_001030954.1, NM_001035877.2 [Q8L5Y6-2]
NP_178360.2, NM_126312.3 [Q8L5Y6-1]

3D structure databases

SMRiQ8L5Y6
ModBaseiSearch...

Protein-protein interaction databases

BioGridi188, 10 interactors
DIPiDIP-33719N
IntActiQ8L5Y6, 12 interactors
STRINGi3702.AT2G02560.1

PTM databases

iPTMnetiQ8L5Y6
SwissPalmiQ8L5Y6

Proteomic databases

PaxDbiQ8L5Y6
PRIDEiQ8L5Y6

Genome annotation databases

EnsemblPlantsiAT2G02560.1; AT2G02560.1; AT2G02560 [Q8L5Y6-1]
AT2G02560.2; AT2G02560.2; AT2G02560 [Q8L5Y6-2]
GeneIDi814786
GrameneiAT2G02560.1; AT2G02560.1; AT2G02560 [Q8L5Y6-1]
AT2G02560.2; AT2G02560.2; AT2G02560 [Q8L5Y6-2]
KEGGiath:AT2G02560

Organism-specific databases

AraportiAT2G02560
TAIRilocus:2065279 AT2G02560

Phylogenomic databases

eggNOGiKOG1824 Eukaryota
ENOG410XPK4 LUCA
HOGENOMiHOG000264713
InParanoidiQ8L5Y6
KOiK17263
OMAiQNLAIKC
OrthoDBi194023at2759
PhylomeDBiQ8L5Y6

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q8L5Y6

Gene expression databases

ExpressionAtlasiQ8L5Y6 baseline and differential
GenevisibleiQ8L5Y6 AT

Family and domain databases

InterProiView protein in InterPro
IPR016024 ARM-type_fold
IPR039852 CAND1/CAND2
IPR013932 TATA-bd_TIP120
PANTHERiPTHR12696 PTHR12696, 1 hit
PfamiView protein in Pfam
PF08623 TIP120, 1 hit
SUPFAMiSSF48371 SSF48371, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiCAND1_ARATH
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8L5Y6
Secondary accession number(s): O64720
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 10, 2010
Last sequence update: October 1, 2002
Last modified: September 18, 2019
This is version 114 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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