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Protein
Submitted name:

Chloride channel 1 isoform

Gene

Clcn1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Chloride channel 1 isoformImported
Gene namesi
Name:Clcn1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:88417 Clcn1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei87 – 109HelicalSequence analysisAdd BLAST23
Transmembranei130 – 152HelicalSequence analysisAdd BLAST23
Transmembranei172 – 192HelicalSequence analysisAdd BLAST21
Transmembranei204 – 223HelicalSequence analysisAdd BLAST20
Transmembranei235 – 258HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ8K3N0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000186048
HOVERGENiHBG103734

Family and domain databases

Gene3Di1.10.3080.10, 1 hit
InterProiView protein in InterPro
IPR014743 Cl-channel_core
IPR001807 Cl-channel_volt-gated
IPR002243 Cl_channel-1
PfamiView protein in Pfam
PF00654 Voltage_CLC, 1 hit
PRINTSiPR00762 CLCHANNEL
PR01112 CLCHANNEL1
SUPFAMiSSF81340 SSF81340, 1 hit

Sequencei

Sequence statusi: Fragment.

Q8K3N0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
SYGLPSENGG LQHRPRKDMG PRHNAHPTQI YGHQKEQYSY KAQDGGMPKK
60 70 80 90 100
MGSSSTMDSL DEDHYSKCQD CVHRLGRVLR RKLGEDWIFL VLLGLLMALV
110 120 130 140 150
SWCMDYVSAK SLQAYKWTYA QMKPSLPLQY LAWVTFPLIL ILFSALFCQL
160 170 180 190 200
ISPQAVGSGI PEMKTILRGV VLKEYLTLKA FVAKVVALTA GLGSGIPVGK
210 220 230 240 250
EGPFVHIASI CAAVLSKFMS MFSGVYETVP GQLDLLVPAC AVGVGCYFAA

PDGAAILLH
Length:259
Mass (Da):28,328
Last modified:October 1, 2002 - v1
Checksum:i826A2F3FA4BD5451
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY046404 mRNA Translation: AAL05908.1
UniGeneiMm.386757

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY046404 mRNA Translation: AAL05908.1
UniGeneiMm.386757

3D structure databases

ProteinModelPortaliQ8K3N0
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:88417 Clcn1

Phylogenomic databases

HOGENOMiHOG000186048
HOVERGENiHBG103734

Miscellaneous databases

SOURCEiSearch...

Family and domain databases

Gene3Di1.10.3080.10, 1 hit
InterProiView protein in InterPro
IPR014743 Cl-channel_core
IPR001807 Cl-channel_volt-gated
IPR002243 Cl_channel-1
PfamiView protein in Pfam
PF00654 Voltage_CLC, 1 hit
PRINTSiPR00762 CLCHANNEL
PR01112 CLCHANNEL1
SUPFAMiSSF81340 SSF81340, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ8K3N0_MOUSE
AccessioniPrimary (citable) accession number: Q8K3N0
Entry historyiIntegrated into UniProtKB/TrEMBL: October 1, 2002
Last sequence update: October 1, 2002
Last modified: August 30, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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