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Protein
Submitted name:

DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative

Gene

PF3D7_1364800

Organism
Plasmodium falciparum (isolate 3D7)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • DNA binding Source: GeneDB
  • DNA-directed 5'-3' RNA polymerase activity Source: GeneDB

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseImported, Transferase
Biological processTranscription

Enzyme and pathway databases

ReactomeiR-PFA-113418 Formation of the Early Elongation Complex
R-PFA-6781823 Formation of TC-NER Pre-Incision Complex

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerases I, II, and III subunit RPABC1, putativeImported (EC:2.7.7.6Imported)
Gene namesi
ORF Names:PF3D7_1364800Imported
OrganismiPlasmodium falciparum (isolate 3D7)Imported
Taxonomic identifieri36329 [NCBI]
Taxonomic lineageiEukaryotaAlveolataApicomplexaAconoidasidaHaemosporidaPlasmodiidaePlasmodiumPlasmodium (Laverania)
Proteomesi
  • UP000001450 Componenti: Chromosome 13

Organism-specific databases

EuPathDBiPlasmoDB:PF3D7_1364800

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

PTM / Processingi

Proteomic databases

PRIDEiQ8ID59

Structurei

3D structure databases

ProteinModelPortaliQ8ID59
SMRiQ8ID59
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 89RNA_pol_Rpb5_NInterPro annotationAdd BLAST87
Domaini132 – 204RNA_pol_Rpb5_CInterPro annotationAdd BLAST73

Phylogenomic databases

HOGENOMiHOG000205213
InParanoidiQ8ID59
KOiK03013
OMAiNQLMRIQ
PhylomeDBiQ8ID59

Family and domain databases

Gene3Di3.40.1340.10, 1 hit
3.90.940.20, 1 hit
HAMAPiMF_00025 RNApol_RpoH_RPB5, 1 hit
InterProiView protein in InterPro
IPR014381 DNA_RNA_pol_RPB5_euk/virus
IPR005571 RNA_pol_Rpb5_N
IPR036710 RNA_pol_Rpb5_N_sf
IPR000783 RNA_pol_subH/Rpb5_C
IPR035913 RPB5-like
IPR020609 RpoH/RPB5
PfamiView protein in Pfam
PF01191 RNA_pol_Rpb5_C, 1 hit
PF03871 RNA_pol_Rpb5_N, 1 hit
PIRSFiPIRSF000747 RPB5, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155 RNA_pol_subH/Rpb5_C, 1 hit
SUPFAMiSSF53036 SSF53036, 1 hit
SSF55287 SSF55287, 1 hit

Sequencei

Sequence statusi: Complete.

Q8ID59-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDPVTRFYK CRKTCCEMLE DRGYIMTPRE KLENFSTFKE MFEDNDRQRS
60 70 80 90 100
KMGISTTHKN DSNNRIIVYF ADEVKKTGVK PLRELTERME EKSIQRAILV
110 120 130 140 150
TQNILTPFAR DAIKEAAPRH IIENFLDTEL LVNITKHELV PRHIPLTSDE
160 170 180 190 200
KKNLLQRYKI MENKLPRIQD VDPVCRYFGL SKGQVVKIIR PSETAGRYVT

YRLVV
Length:205
Mass (Da):24,154
Last modified:March 1, 2003 - v1
Checksum:i25B08D69D4C06085
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL844509 Genomic DNA Translation: CAD52768.1
RefSeqiXP_001350359.1, XM_001350323.1

Genome annotation databases

EnsemblProtistsiCAD52768; CAD52768; PF3D7_1364800
GeneDBiPF3D7_1364800.1:pep
GeneIDi814300
KEGGipfa:PF3D7_1364800

Similar proteinsi

Entry informationi

Entry nameiQ8ID59_PLAF7
AccessioniPrimary (citable) accession number: Q8ID59
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: September 12, 2018
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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