UniProtKB - Q8GWF1 (WRK38_ARATH)
Protein
Probable WRKY transcription factor 38
Gene
WRKY38
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity).By similarity
Caution
It is uncertain whether Met-1 or Met-3 is the initiator.Curated
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 104 – 172 | WRKYPROSITE-ProRule annotationAdd BLAST | 69 |
GO - Molecular functioni
- DNA-binding transcription factor activity Source: TAIR
- transcription regulatory region sequence-specific DNA binding Source: TAIR
GO - Biological processi
- defense response to bacterium Source: TAIR
- salicylic acid mediated signaling pathway Source: TAIR
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Names & Taxonomyi
Protein namesi | Recommended name: Probable WRKY transcription factor 38Alternative name(s): WRKY DNA-binding protein 38 |
Gene namesi | Name:WRKY38 Ordered Locus Names:At5g22570 ORF Names:MQJ16.11 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT5G22570 |
TAIRi | locus:2171157, AT5G22570 |
Subcellular locationi
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000133679 | 1 – 289 | Probable WRKY transcription factor 38Add BLAST | 289 |
Proteomic databases
PaxDbi | Q8GWF1 |
PRIDEi | Q8GWF1 |
ProteomicsDBi | 234288 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q8GWF1, baseline and differential |
Genevisiblei | Q8GWF1, AT |
Interactioni
Binary interactionsi
Hide detailsQ8GWF1
Protein-protein interaction databases
BioGRIDi | 17595, 16 interactors |
IntActi | Q8GWF1, 17 interactors |
STRINGi | 3702.AT5G22570.1 |
Family & Domainsi
Sequence similaritiesi
Belongs to the WRKY group III family.Curated
Phylogenomic databases
HOGENOMi | CLU_066547_1_0_1 |
InParanoidi | Q8GWF1 |
OMAi | TINDAMY |
OrthoDBi | 1070041at2759 |
PhylomeDBi | Q8GWF1 |
Family and domain databases
Gene3Di | 2.20.25.80, 1 hit |
InterProi | View protein in InterPro IPR003657, WRKY_dom IPR036576, WRKY_dom_sf |
Pfami | View protein in Pfam PF03106, WRKY, 1 hit |
SMARTi | View protein in SMART SM00774, WRKY, 1 hit |
SUPFAMi | SSF118290, SSF118290, 1 hit |
PROSITEi | View protein in PROSITE PS50811, WRKY, 1 hit |
i Sequence
Sequence statusi: Complete.
Q8GWF1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEMNSPHEKA VQAIRYGHSC AMRLKRRLNH PMADGGPLSS YDLAKSIVES
60 70 80 90 100
FSNAISILSA KPETEDDQFS DLSSRDSSPP PQGSPSKKRK IDSTNSSENW
110 120 130 140 150
RDDSPDPIYY DGYLWRKYGQ KSIKKSNHQR SYYRCSYNKD HNCEARKHEQ
160 170 180 190 200
KIKDNPPVYR TTYFGHHTCK TEHNLDAIFI AGQDPLDDFK STQMIRFGKD
210 220 230 240 250
QDQEKESRSN GFSLSVKHEE DIIKEQAIDQ YREITSNDQD CQDVIEEYLS
260 270 280
SPSGSYPPSS SSGSESADFN SDLLFDNPDS WDRYDQFYF
Sequence cautioni
The sequence BAB09129 differs from that shown. Reason: Erroneous initiation.Curated
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB012244 Genomic DNA Translation: BAB09129.1 Different initiation. CP002688 Genomic DNA Translation: AED93044.1 AK118884 mRNA Translation: BAC43469.1 BT005645 mRNA Translation: AAO64065.1 AF442395 mRNA Translation: AAL35288.1 |
RefSeqi | NP_197649.2, NM_122163.3 |
Genome annotation databases
EnsemblPlantsi | AT5G22570.1; AT5G22570.1; AT5G22570 |
GeneIDi | 832320 |
Gramenei | AT5G22570.1; AT5G22570.1; AT5G22570 |
KEGGi | ath:AT5G22570 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AB012244 Genomic DNA Translation: BAB09129.1 Different initiation. CP002688 Genomic DNA Translation: AED93044.1 AK118884 mRNA Translation: BAC43469.1 BT005645 mRNA Translation: AAO64065.1 AF442395 mRNA Translation: AAL35288.1 |
RefSeqi | NP_197649.2, NM_122163.3 |
3D structure databases
SMRi | Q8GWF1 |
ModBasei | Search... |
Protein-protein interaction databases
BioGRIDi | 17595, 16 interactors |
IntActi | Q8GWF1, 17 interactors |
STRINGi | 3702.AT5G22570.1 |
Proteomic databases
PaxDbi | Q8GWF1 |
PRIDEi | Q8GWF1 |
ProteomicsDBi | 234288 |
Genome annotation databases
EnsemblPlantsi | AT5G22570.1; AT5G22570.1; AT5G22570 |
GeneIDi | 832320 |
Gramenei | AT5G22570.1; AT5G22570.1; AT5G22570 |
KEGGi | ath:AT5G22570 |
Organism-specific databases
Araporti | AT5G22570 |
TAIRi | locus:2171157, AT5G22570 |
Phylogenomic databases
HOGENOMi | CLU_066547_1_0_1 |
InParanoidi | Q8GWF1 |
OMAi | TINDAMY |
OrthoDBi | 1070041at2759 |
PhylomeDBi | Q8GWF1 |
Miscellaneous databases
PROi | PR:Q8GWF1 |
Gene expression databases
ExpressionAtlasi | Q8GWF1, baseline and differential |
Genevisiblei | Q8GWF1, AT |
Family and domain databases
Gene3Di | 2.20.25.80, 1 hit |
InterProi | View protein in InterPro IPR003657, WRKY_dom IPR036576, WRKY_dom_sf |
Pfami | View protein in Pfam PF03106, WRKY, 1 hit |
SMARTi | View protein in SMART SM00774, WRKY, 1 hit |
SUPFAMi | SSF118290, SSF118290, 1 hit |
PROSITEi | View protein in PROSITE PS50811, WRKY, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | WRK38_ARATH | |
Accessioni | Q8GWF1Primary (citable) accession number: Q8GWF1 Secondary accession number(s): Q9FK82 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | April 11, 2003 |
Last sequence update: | March 1, 2003 | |
Last modified: | February 10, 2021 | |
This is version 119 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families