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Entry version 111 (02 Dec 2020)
Sequence version 1 (01 Mar 2003)
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Protein

ABC transporter G family member 39

Gene

ABCG39

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

May be a general defense protein.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi187 – 194ATP 1PROSITE-ProRule annotation8
Nucleotide bindingi891 – 898ATP 2PROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
ABC transporter G family member 391 Publication
Short name:
OsABCG391 Publication
Alternative name(s):
Pleiotropic drug resistance protein 72 Publications
Short name:
OsPDR71 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ABCG391 Publication
Synonyms:PDR72 Publications
Ordered Locus Names:Os02g0208300Imported, LOC_Os02g11760
ORF Names:OJ1003_F05.29-1Imported, OJ1006_A02.12-1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza sativa subsp. japonica (Rice)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri39947 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000059680 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 2
  • UP000000763 Componenti: Chromosome 2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/subcellular%5Flocation%5Fsection">'Subcellular location'</a> section describes the extent of a membrane-spanning region of the protein. It denotes the presence of both alpha-helical transmembrane regions and the membrane spanning regions of beta-barrel transmembrane proteins.<p><a href='/help/transmem' target='_top'>More...</a></p>Transmembranei522 – 542HelicalSequence analysisAdd BLAST21
Transmembranei555 – 575HelicalSequence analysisAdd BLAST21
Transmembranei610 – 630HelicalSequence analysisAdd BLAST21
Transmembranei642 – 662HelicalSequence analysisAdd BLAST21
Transmembranei667 – 687HelicalSequence analysisAdd BLAST21
Transmembranei754 – 774HelicalSequence analysisAdd BLAST21
Transmembranei1192 – 1212HelicalSequence analysisAdd BLAST21
Transmembranei1220 – 1240HelicalSequence analysisAdd BLAST21
Transmembranei1278 – 1298HelicalSequence analysisAdd BLAST21
Transmembranei1305 – 1325HelicalSequence analysisAdd BLAST21
Transmembranei1335 – 1355HelicalSequence analysisAdd BLAST21
Transmembranei1362 – 1382HelicalSequence analysisAdd BLAST21
Transmembranei1414 – 1434HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002346491 – 1444ABC transporter G family member 39Add BLAST1444

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8GU88

PRoteomics IDEntifications database

More...
PRIDEi
Q8GU88

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8GU88

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini154 – 426ABC transporter 1PROSITE-ProRule annotationAdd BLAST273
Domaini504 – 717ABC transmembrane type-2 1Add BLAST214
Domaini846 – 1098ABC transporter 2PROSITE-ProRule annotationAdd BLAST253
Domaini1171 – 1385ABC transmembrane type-2 2Add BLAST215

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Keywords - Domaini

Repeat, Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8GU88

Family and domain databases

Conserved Domains Database

More...
CDDi
cd03233, ABCG_PDR_domain1, 1 hit
cd03232, ABCG_PDR_domain2, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003593, AAA+_ATPase
IPR013525, ABC_2_trans
IPR029481, ABC_trans_N
IPR003439, ABC_transporter-like
IPR043926, ABCG_dom
IPR034001, ABCG_PDR_1
IPR034003, ABCG_PDR_2
IPR027417, P-loop_NTPase
IPR013581, PDR_assoc

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01061, ABC2_membrane, 2 hits
PF19055, ABC2_membrane_7, 1 hit
PF00005, ABC_tran, 2 hits
PF14510, ABC_trans_N, 1 hit
PF08370, PDR_assoc, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00382, AAA, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540, SSF52540, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50893, ABC_TRANSPORTER_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q8GU88-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDIVRMGSVA SGGGSVRRTA SSWRGTSGRS DAFGRSVREE DDEEALKWAA
60 70 80 90 100
IEKLPTYDRM RKGILTAGGV EEVDIGGLGL QERRNLIERL VRTAEEDNER
110 120 130 140 150
FLLKLRDRME RVGIDNPTIE VRFENLSIDA EAYVGNRGIP TFTNFFSNKI
160 170 180 190 200
MDVLSAMRIV SSGKRPISIL HDISGIIRPG RMSLLLGPPG SGKTSLLLAL
210 220 230 240 250
AGKLDSTLKV SGRVTYNGHD MDEFVPQRTS AYIGQHDLHI GEMTVRETLA
260 270 280 290 300
FSARCQGVGT RYDMLTELSR REKEASIKPD PDIDVYMKAI SVEGQESVVT
310 320 330 340 350
DYILKILGLE ICADTMVGDA MIRGISGGQK KRVTTGEMLV GPAKALFMDE
360 370 380 390 400
ISTGLDSSTT YQIVNSLRQS VHILGGTALI ALLQPAPETY DLFDDIVLLS
410 420 430 440 450
EGQIVYQGPR ENILEFFEAM GFKCPERKGV ADFLQEVTSR KDQHQYWCRR
460 470 480 490 500
DEPYRYISVN DFSEAFKEFH VGRNLGSELR VPFDRTRNHP AALTTSRYGI
510 520 530 540 550
SKMELTKACF SREWLLMKRN SFVYIFKILQ LIILGSIGMT VFLRTKMHRR
560 570 580 590 600
SVEDGAIFLG AMFLGLVTHL FNGFAELAMS IAKLPIFYKQ RDLLFYPSWA
610 620 630 640 650
YALPTWVLKI PISFLECAVW ICMTYYVMGF DPNIERFFRH YVLLVLISQM
660 670 680 690 700
ASGLFRLLAA LGREMVVADT FGSFAQLILL VLGGFLISRE NIKKWWIWGY
710 720 730 740 750
WSSPLMYAQN AIAVNEFLGH SWNKVVDPTQ SNDTLGVQVL KVRGIFVDAN
760 770 780 790 800
WYWIGVGALL GYIMLFNILF ILFLEWLDPL GKGQAVVSEE ELREKHVNRT
810 820 830 840 850
GENVELLTLG TDSQNSPSDA NAGRGEITGA DTRKRGMVLP FTPLSITFDN
860 870 880 890 900
IRYSVDMPQE MKDKGVTEDR LLLLKGVSGA FRPGVLTALM GVSGAGKTTL
910 920 930 940 950
MDVLAGRKTG GYIEGDISIS GYPKKQETFA RIAGYCEQND IHSPHVTVYE
960 970 980 990 1000
SLLYSAWLRL PSEVDSEARK MFVEEVMELV ELTSLRGALV GLPGVNGLST
1010 1020 1030 1040 1050
EQRKRLTIAV ELVANPSIIF MDEPTSGLDA RAAAIVMRTV RNTVDTGRTV
1060 1070 1080 1090 1100
VCTIHQPSID IFEAFDELFL MKRGGEEIYV GPLGHNSCHL INYFEGIQGV
1110 1120 1130 1140 1150
RKIKDGYNPA TWMLEVTTLA QEDILGINFA EVYRNSDLYQ RNKTLISELS
1160 1170 1180 1190 1200
TPPPGSTDLH FPTQFSQPFF TQCMACLWKQ HKSYWRNPSY TATRIFFTTV
1210 1220 1230 1240 1250
IALIFGTIFL NLGKKINKRL DLFNSLGSMY AAVLFIGIQN GQTVQPIVDV
1260 1270 1280 1290 1300
ERTVFYREKA AGMYSALPYA FAQVLIEIPH IFLQTVVYGL IVYSLIGFDW
1310 1320 1330 1340 1350
TVEKFFWYMF FMFFTFMYFT FYGMMAVAMT PNSDIAAIVS TAFYCIWNIF
1360 1370 1380 1390 1400
AGFLIPRPRI PIWWRWYSWA CPVAWTLYGL VASQYGDITN STLEDGEVVQ
1410 1420 1430 1440
DYIRRYFGFR HDYLGYVATA VVGFAALFAF VFAFSIKVFN FQRR
Length:1,444
Mass (Da):162,855
Last modified:March 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAEFCD861B2DE7A88
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0P0VG68A0A0P0VG68_ORYSJ
Os02g0208300 protein
Os02g0208300, OSNPB_020208300
183Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAF08173 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AJ535048 Genomic DNA Translation: CAD59570.1
AP003974 Genomic DNA Translation: BAD24998.1
AP003977 Genomic DNA Translation: BAD25007.1
AP008208 Genomic DNA Translation: BAF08173.2 Sequence problems.
AP014958 Genomic DNA No translation available.

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ535048 Genomic DNA Translation: CAD59570.1
AP003974 Genomic DNA Translation: BAD24998.1
AP003977 Genomic DNA Translation: BAD25007.1
AP008208 Genomic DNA Translation: BAF08173.2 Sequence problems.
AP014958 Genomic DNA No translation available.

3D structure databases

SMRiQ8GU88
ModBaseiSearch...

Proteomic databases

PaxDbiQ8GU88
PRIDEiQ8GU88

Phylogenomic databases

InParanoidiQ8GU88

Family and domain databases

CDDicd03233, ABCG_PDR_domain1, 1 hit
cd03232, ABCG_PDR_domain2, 1 hit
InterProiView protein in InterPro
IPR003593, AAA+_ATPase
IPR013525, ABC_2_trans
IPR029481, ABC_trans_N
IPR003439, ABC_transporter-like
IPR043926, ABCG_dom
IPR034001, ABCG_PDR_1
IPR034003, ABCG_PDR_2
IPR027417, P-loop_NTPase
IPR013581, PDR_assoc
PfamiView protein in Pfam
PF01061, ABC2_membrane, 2 hits
PF19055, ABC2_membrane_7, 1 hit
PF00005, ABC_tran, 2 hits
PF14510, ABC_trans_N, 1 hit
PF08370, PDR_assoc, 1 hit
SMARTiView protein in SMART
SM00382, AAA, 2 hits
SUPFAMiSSF52540, SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS50893, ABC_TRANSPORTER_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiAB39G_ORYSJ
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8GU88
Secondary accession number(s): Q0E2W5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 16, 2006
Last sequence update: March 1, 2003
Last modified: December 2, 2020
This is version 111 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families
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