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Protein
Submitted name:

NiFe hydrogenase assembly chaperone HypC

Gene

hypC

Organism
Shewanella oneidensis (strain MR-1)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciSONE211586:G1GMP-1923-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
NiFe hydrogenase assembly chaperone HypCImported
Gene namesi
Name:hypCImported
Ordered Locus Names:SO_2092Imported
OrganismiShewanella oneidensis (strain MR-1)Imported
Taxonomic identifieri211586 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000008186 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi2InterchainCombined sources

Proteomic databases

PaxDbiQ8EF93

Interactioni

Protein-protein interaction databases

STRINGi211586.SO_2092

Structurei

3D structure databases

ProteinModelPortaliQ8EF93
SMRiQ8EF93
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8EF93

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili58 – 78Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105WRB Bacteria
COG0298 LUCA
HOGENOMiHOG000278755
KOiK04653
OMAiYVIVHTG
OrthoDBiPOG091H01UL
PhylomeDBiQ8EF93

Family and domain databases

Gene3Di2.40.50.970, 1 hit
InterProiView protein in InterPro
IPR037254 HupF/HypC_sf
IPR001109 Hydrogenase_HupF/HypC
PANTHERiPTHR35177 PTHR35177, 1 hit
PfamiView protein in Pfam
PF01455 HupF_HypC, 1 hit
PRINTSiPR00445 HUPFHYPC
SUPFAMiSSF159127 SSF159127, 1 hit
TIGRFAMsiTIGR00074 hypC_hupF, 1 hit

Sequencei

Sequence statusi: Complete.

Q8EF93-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCLSIPSQVV AVDNERQSVT VDTLGVRRDV SSHLMTEPLA IGDYVLIHIG
60 70 80
FVMNKIDRND ALQSLELYQE IVSKLENETT H
Length:81
Mass (Da):9,097
Last modified:March 1, 2003 - v1
Checksum:iCE5CA60C6E7A10C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA Translation: AAN55139.1
RefSeqiNP_717695.1, NC_004347.2
WP_011072156.1, NC_004347.2

Genome annotation databases

EnsemblBacteriaiAAN55139; AAN55139; SO_2092
GeneIDi1169836
KEGGison:SO_2092
PATRICifig|211586.12.peg.2008

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014299 Genomic DNA Translation: AAN55139.1
RefSeqiNP_717695.1, NC_004347.2
WP_011072156.1, NC_004347.2

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3D3RX-ray1.85A/B1-80[»]
ProteinModelPortaliQ8EF93
SMRiQ8EF93
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi211586.SO_2092

Proteomic databases

PaxDbiQ8EF93

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAN55139; AAN55139; SO_2092
GeneIDi1169836
KEGGison:SO_2092
PATRICifig|211586.12.peg.2008

Phylogenomic databases

eggNOGiENOG4105WRB Bacteria
COG0298 LUCA
HOGENOMiHOG000278755
KOiK04653
OMAiYVIVHTG
OrthoDBiPOG091H01UL
PhylomeDBiQ8EF93

Enzyme and pathway databases

BioCyciSONE211586:G1GMP-1923-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ8EF93

Family and domain databases

Gene3Di2.40.50.970, 1 hit
InterProiView protein in InterPro
IPR037254 HupF/HypC_sf
IPR001109 Hydrogenase_HupF/HypC
PANTHERiPTHR35177 PTHR35177, 1 hit
PfamiView protein in Pfam
PF01455 HupF_HypC, 1 hit
PRINTSiPR00445 HUPFHYPC
SUPFAMiSSF159127 SSF159127, 1 hit
TIGRFAMsiTIGR00074 hypC_hupF, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ8EF93_SHEON
AccessioniPrimary (citable) accession number: Q8EF93
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: October 10, 2018
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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