UniProtKB - Q8DIR2 (Q8DIR2_THEEB)
Protein
Superoxide dismutase
Gene
sodB
Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Functioni
Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
Catalytic activityi
- EC:1.15.1.1UniRule annotationARBA annotation
Sites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 28 | Divalent metal cationUniRule annotation | 1 | |
Metal bindingi | 28 | Iron; via tele nitrogenCombined sources | 1 | |
Metal bindingi | 80 | Divalent metal cationUniRule annotation | 1 | |
Metal bindingi | 80 | Iron; via tele nitrogenCombined sources | 1 | |
Metal bindingi | 162 | Divalent metal cationUniRule annotation | 1 | |
Metal bindingi | 162 | IronCombined sources | 1 | |
Metal bindingi | 166 | Divalent metal cationUniRule annotation | 1 | |
Metal bindingi | 166 | Iron; via tele nitrogenCombined sources | 1 |
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- superoxide dismutase activity Source: UniProtKB-EC
Keywordsi
Molecular function | OxidoreductaseUniRule annotationARBA annotation |
Ligand | IronCombined sources, Metal-bindingUniRule annotationCombined sourcesARBA annotation |
Names & Taxonomyi
Protein namesi | Recommended name: Superoxide dismutaseUniRule annotationARBA annotation (EC:1.15.1.1UniRule annotationARBA annotation) |
Gene namesi | Name:sodBImported |
Organismi | Thermosynechococcus elongatus (strain BP-1)Imported |
Taxonomic identifieri | 197221 [NCBI] |
Taxonomic lineagei | Bacteria › Cyanobacteria › Synechococcales › Synechococcaceae › Thermosynechococcus › |
Proteomesi |
|
Interactioni
Subunit structurei
Homodimer.
ARBA annotationProtein-protein interaction databases
STRINGi | 197221.22295244 |
Structurei
3D structure databases
SMRi | Q8DIR2 |
ModBasei | Search... |
PDBe-KBi | Search... |
Miscellaneous databases
EvolutionaryTracei | Q8DIR2 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 6 – 88 | Sod_Fe_NInterPro annotationAdd BLAST | 83 | |
Domaini | 95 – 195 | Sod_Fe_CInterPro annotationAdd BLAST | 101 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | COG0605, Bacteria |
OMAi | KWGSFDK |
OrthoDBi | 1440645at2 |
Family and domain databases
Gene3Di | 1.10.287.990, 1 hit 2.40.500.20, 1 hit |
InterProi | View protein in InterPro IPR001189, Mn/Fe_SOD IPR019833, Mn/Fe_SOD_BS IPR019832, Mn/Fe_SOD_C IPR019831, Mn/Fe_SOD_N IPR036324, Mn/Fe_SOD_N_sf IPR036314, SOD_C_sf |
Pfami | View protein in Pfam PF02777, Sod_Fe_C, 1 hit PF00081, Sod_Fe_N, 1 hit |
PIRSFi | PIRSF000349, SODismutase, 1 hit |
PRINTSi | PR01703, MNSODISMTASE |
SUPFAMi | SSF46609, SSF46609, 1 hit SSF54719, SSF54719, 1 hit |
PROSITEi | View protein in PROSITE PS00088, SOD_MN, 1 hit |
i Sequence
Sequence statusi: Complete.
Q8DIR2-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAFVQEPLPF DPGALEPYGM SAKTLEFHYG KHHKGYVDNL NKLTQDTELA
60 70 80 90 100
DKSLEDVIRT TYGDAAKVGI FNNAAQVWNH TFFWNSLKPG GGGVPTGDVA
110 120 130 140 150
ARINSAFGSY DEFKAQFKNA AATQFGSGWA WLVLEAGTLK VTKTANAENP
160 170 180 190 200
LVHGQVPLLT IDVWEHAYYL DYQNRRPDFI DNFLNQLVNW DFVAKNLAAA
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BA000039 Genomic DNA Translation: BAC09071.1 |
RefSeqi | NP_682309.1, NC_004113.1 WP_011057359.1, NC_004113.1 |
Genome annotation databases
EnsemblBacteriai | BAC09071; BAC09071; BAC09071 |
KEGGi | tel:tll1519 |
PATRICi | fig|197221.4.peg.1596 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BA000039 Genomic DNA Translation: BAC09071.1 |
RefSeqi | NP_682309.1, NC_004113.1 WP_011057359.1, NC_004113.1 |
3D structure databases
Select the link destinations: PDBei RCSB PDBi PDBji Links Updated | PDB entry | Method | Resolution (Å) | Chain | Positions | PDBsum |
1MY6 | X-ray | 1.60 | A/B | 2-200 | [»] | |
SMRi | Q8DIR2 | |||||
ModBasei | Search... | |||||
PDBe-KBi | Search... |
Protein-protein interaction databases
STRINGi | 197221.22295244 |
Genome annotation databases
EnsemblBacteriai | BAC09071; BAC09071; BAC09071 |
KEGGi | tel:tll1519 |
PATRICi | fig|197221.4.peg.1596 |
Phylogenomic databases
eggNOGi | COG0605, Bacteria |
OMAi | KWGSFDK |
OrthoDBi | 1440645at2 |
Miscellaneous databases
EvolutionaryTracei | Q8DIR2 |
Family and domain databases
Gene3Di | 1.10.287.990, 1 hit 2.40.500.20, 1 hit |
InterProi | View protein in InterPro IPR001189, Mn/Fe_SOD IPR019833, Mn/Fe_SOD_BS IPR019832, Mn/Fe_SOD_C IPR019831, Mn/Fe_SOD_N IPR036324, Mn/Fe_SOD_N_sf IPR036314, SOD_C_sf |
Pfami | View protein in Pfam PF02777, Sod_Fe_C, 1 hit PF00081, Sod_Fe_N, 1 hit |
PIRSFi | PIRSF000349, SODismutase, 1 hit |
PRINTSi | PR01703, MNSODISMTASE |
SUPFAMi | SSF46609, SSF46609, 1 hit SSF54719, SSF54719, 1 hit |
PROSITEi | View protein in PROSITE PS00088, SOD_MN, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q8DIR2_THEEB | |
Accessioni | Q8DIR2Primary (citable) accession number: Q8DIR2 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | March 1, 2003 |
Last sequence update: | March 1, 2003 | |
Last modified: | December 2, 2020 | |
This is version 108 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |