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Protein

Chromophore lyase CpcS/CpeS

Gene

cpcS

Organism
Thermosynechococcus elongatus (strain BP-1)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyase

Enzyme and pathway databases

BioCyciTELO197221:G1G3I-1729-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Chromophore lyase CpcS/CpeSUniRule annotation (EC:4.-.-.-UniRule annotation)
Gene namesi
Name:cpcSUniRule annotation
Ordered Locus Names:tll1699
OrganismiThermosynechococcus elongatus (strain BP-1)
Taxonomic identifieri197221 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesSynechococcaceaeThermosynechococcus
Proteomesi
  • UP000000440 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004031451 – 182Chromophore lyase CpcS/CpeSAdd BLAST182

Interactioni

Protein-protein interaction databases

STRINGi197221.tll1699

Structurei

Secondary structure

1182
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details

3D structure databases

ProteinModelPortaliQ8DI91
SMRiQ8DI91
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ8DI91

Family & Domainsi

Sequence similaritiesi

Belongs to the CpcS/CpeS biliprotein lyase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108P5B Bacteria
ENOG4111G1V LUCA
HOGENOMiHOG000232525
OMAiYAEIVPV
OrthoDBiPOG091H146U

Family and domain databases

CDDicd16339 CpcS, 1 hit
Gene3Di2.40.128.20, 1 hit
HAMAPiMF_01459 Chrphore_lyase_CpxS, 1 hit
InterProiView protein in InterPro
IPR012674 Calycin
IPR018536 CpcS/CpeS
PfamiView protein in Pfam
PF09367 CpeS, 1 hit

Sequencei

Sequence statusi: Complete.

Q8DI91-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCIGMDIRDF FAQSAGRWFS QRTSHHLAFK QTESGKSQLT IELLSVDDPA
60 70 80 90 100
VIALCQQYDM DPAWAVCGAR VSWDGTMEWD NEKHEGSTVL VPIMDQGSRM
110 120 130 140 150
EGKLLREMGY AEKAPVAGRF SMGSDGALTL ITEYETIYSE ERLWFASPNL
160 170 180
RLRTSILKRF GGFSMASFCS EIRLGVTQPA NS
Length:182
Mass (Da):20,363
Last modified:March 1, 2003 - v1
Checksum:i1BF78D948C8893C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA Translation: BAC09251.1
RefSeqiNP_682489.1, NC_004113.1
WP_011057536.1, NC_004113.1

Genome annotation databases

EnsemblBacteriaiBAC09251; BAC09251; BAC09251
GeneIDi1011181
KEGGitel:tll1699
PATRICifig|197221.4.peg.1780

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000039 Genomic DNA Translation: BAC09251.1
RefSeqiNP_682489.1, NC_004113.1
WP_011057536.1, NC_004113.1

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3BDRX-ray2.80A1-182[»]
ProteinModelPortaliQ8DI91
SMRiQ8DI91
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi197221.tll1699

Protocols and materials databases

DNASUi1011181
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC09251; BAC09251; BAC09251
GeneIDi1011181
KEGGitel:tll1699
PATRICifig|197221.4.peg.1780

Phylogenomic databases

eggNOGiENOG4108P5B Bacteria
ENOG4111G1V LUCA
HOGENOMiHOG000232525
OMAiYAEIVPV
OrthoDBiPOG091H146U

Enzyme and pathway databases

BioCyciTELO197221:G1G3I-1729-MONOMER

Miscellaneous databases

EvolutionaryTraceiQ8DI91

Family and domain databases

CDDicd16339 CpcS, 1 hit
Gene3Di2.40.128.20, 1 hit
HAMAPiMF_01459 Chrphore_lyase_CpxS, 1 hit
InterProiView protein in InterPro
IPR012674 Calycin
IPR018536 CpcS/CpeS
PfamiView protein in Pfam
PF09367 CpeS, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCPXS_THEEB
AccessioniPrimary (citable) accession number: Q8DI91
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 11, 2011
Last sequence update: March 1, 2003
Last modified: February 28, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
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Main funding by: National Institutes of Health

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