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Protein
Submitted name:

C-type lectin domain family 3, member b

Gene

Clec3b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandLectinSAAS annotationImported

Enzyme and pathway databases

ReactomeiR-MMU-114608 Platelet degranulation

Names & Taxonomyi

Protein namesi
Submitted name:
C-type lectin domain family 3, member bImported
Submitted name:
TetranectinImported
Gene namesi
Name:Clec3bImported
Synonyms:TnaImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:104540 Clec3b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_501509910422 – 202Sequence analysisAdd BLAST181

Keywords - PTMi

Disulfide bondSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000025784 Expressed in 118 organ(s), highest expression level in zone of skin

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini77 – 198C-type lectinInterPro annotationAdd BLAST122

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili44 – 64Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
GeneTreeiENSGT00610000086061
HOVERGENiHBG108270
KOiK17520
OMAiGKAENCA
OrthoDBiEOG091G0NMQ
TreeFamiTF330481

Family and domain databases

Gene3Di3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR018378 C-type_lectin_CS
IPR016187 CTDL_fold
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 1 hit
SUPFAMiSSF56436 SSF56436, 1 hit
PROSITEiView protein in PROSITE
PS00615 C_TYPE_LECTIN_1, 1 hit
PS50041 C_TYPE_LECTIN_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q8CFZ6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGFWGTYLLF CLFSFLSQVI AESPTPKAKK AANAKKDLVS SKMFEELKNR
60 70 80 90 100
MDVLAQEVAL LKEKQALQTV CLKGTKVNLK CLLAFTQPKT FHEASEDCIS
110 120 130 140 150
QGGTLGTPQS ELENEALFEY ARHSVGNDAN IWLGLNDMAA EGAWVDMTGG
160 170 180 190 200
LLAYKNWETE ITTQPDGGKA ENCAALSGAA NGKWFDKRCR DQLPYICQFA

IV
Length:202
Mass (Da):22,256
Last modified:March 1, 2003 - v1
Checksum:i65707A362F93A3C3
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P43025TETN_MOUSE
Tetranectin
Clec3b Tna
202Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134248 Genomic DNA No translation available.
BC035043 mRNA Translation: AAH35043.1
RefSeqiNP_035736.2, NM_011606.2
UniGeneiMm.34588

Genome annotation databases

EnsembliENSMUST00000026890; ENSMUSP00000026890; ENSMUSG00000025784
GeneIDi21922
KEGGimmu:21922
UCSCiuc009sfw.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134248 Genomic DNA No translation available.
BC035043 mRNA Translation: AAH35043.1
RefSeqiNP_035736.2, NM_011606.2
UniGeneiMm.34588

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000026890; ENSMUSP00000026890; ENSMUSG00000025784
GeneIDi21922
KEGGimmu:21922
UCSCiuc009sfw.2 mouse

Organism-specific databases

CTDi7123
MGIiMGI:104540 Clec3b

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
GeneTreeiENSGT00610000086061
HOVERGENiHBG108270
KOiK17520
OMAiGKAENCA
OrthoDBiEOG091G0NMQ
TreeFamiTF330481

Enzyme and pathway databases

ReactomeiR-MMU-114608 Platelet degranulation

Miscellaneous databases

ChiTaRSiClec3b mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000025784 Expressed in 118 organ(s), highest expression level in zone of skin

Family and domain databases

Gene3Di3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR018378 C-type_lectin_CS
IPR016187 CTDL_fold
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
SMARTiView protein in SMART
SM00034 CLECT, 1 hit
SUPFAMiSSF56436 SSF56436, 1 hit
PROSITEiView protein in PROSITE
PS00615 C_TYPE_LECTIN_1, 1 hit
PS50041 C_TYPE_LECTIN_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ8CFZ6_MOUSE
AccessioniPrimary (citable) accession number: Q8CFZ6
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: November 7, 2018
This is version 134 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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