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Protein

Radial spoke head protein 6 homolog A

Gene

Rsph6a

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Radial spoke head protein 6 homolog A
Alternative name(s):
Radial spoke head-like protein 1
Gene namesi
Name:Rsph6a
Synonyms:Rshl1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1927643 Rsph6a

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003127611 – 708Radial spoke head protein 6 homolog AAdd BLAST708

Proteomic databases

PaxDbiQ8CDR2
PRIDEiQ8CDR2

PTM databases

PhosphoSitePlusiQ8CDR2

Expressioni

Tissue specificityi

Expressed in testis.1 Publication

Gene expression databases

BgeeiENSMUSG00000040866 Expressed in 22 organ(s), highest expression level in testis
CleanExiMM_RSHL1
ExpressionAtlasiQ8CDR2 baseline and differential
GenevisibleiQ8CDR2 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000046526

Structurei

3D structure databases

SMRiQ8CDR2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi350 – 388Glu-richAdd BLAST39
Compositional biasi495 – 707Glu-richAdd BLAST213

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410IF1Z Eukaryota
ENOG410XQP5 LUCA
GeneTreeiENSGT00500000044869
HOGENOMiHOG000006653
HOVERGENiHBG070874
InParanoidiQ8CDR2
OMAiVPNIMET
OrthoDBiEOG091G0FGU
PhylomeDBiQ8CDR2
TreeFamiTF324531

Family and domain databases

InterProiView protein in InterPro
IPR006802 Radial_spoke
PANTHERiPTHR13159 PTHR13159, 1 hit
PfamiView protein in Pfam
PF04712 Radial_spoke, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q8CDR2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGEPPPNPDP SQTRRASQGS ERARSQEYSQ PLLTIPEDGL NRPPPQRGSR
60 70 80 90 100
SSQGSQDLQG TGLPHWPQRS SLVPDVQGDE GTEYHQSMPL GYTPGFPMEF
110 120 130 140 150
SQQGYLDDSR MMEQFPQGQD LLEQLESTYQ GSASGILGQL NLYPREDEIF
160 170 180 190 200
SQDTQHGPYL RDDPSLHLRP SDLGFMPIVG EVPDPEPREL AIQNAKAYLL
210 220 230 240 250
RTSMSCNLSL YEHLVNLLTK ILNQRPEDPL SILESLNRTM QWEWFHPKLD
260 270 280 290 300
TLRDDPEMQP TYEMAEKQKA LFIRGGGEGE QEMEEEVTDS PVPNIMETAF
310 320 330 340 350
YFEQAGVGLS SDESFRIFLA LKQLVEQQPI HMCRFWGKIL GLSRSYLVAE
360 370 380 390 400
VEFREGEEEG EEEEVEEMME GGEVLETHGE EEGEEDEEKV VDSVPKPQWK
410 420 430 440 450
PPPIIPKEES RSGTNKYLYF VCNEPGRPWT RLPHVTPAQI VCARKIKKFF
460 470 480 490 500
TGFLDTPVIS YPPFPGNEAN YLRAQIARIS AATHISPLGF YQFGEEEGDE
510 520 530 540 550
EEEGGAGRDS FEENPDFEGI PVLELVDSMA NWVHHTQHIL PQGRCTWVNP
560 570 580 590 600
LQKTEEEEEL GEEEEKADEA MEEVEQEVGP PLLTPLSEDA EIMHLSPWTT
610 620 630 640 650
RLSCSLSPQY SVAIVRSNLW PGAYAYATGK KFENIYIGWG HKYSPENFNP
660 670 680 690 700
MLPALIQQEY PSGPEITEMS DPTVEEEQAL KAAQEQALAA AEEEEEDEEE

EEDEDLED
Length:708
Mass (Da):80,202
Last modified:March 1, 2003 - v1
Checksum:i467FD78288CEF1A5
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q99MM9Q99MM9_MOUSE
Radial spoke head protein 6 homolog...
Rsph6a Rshl1
453Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti221I → L in AAK19323 (PubMed:11237735).Curated1
Sequence conflicti575E → K in AAK19323 (PubMed:11237735).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF329192 mRNA Translation: AAK19323.1
AK029699 mRNA Translation: BAC26571.1
CCDSiCCDS20887.1
RefSeqiNP_001153143.1, NM_001159671.1
NP_112545.2, NM_031255.2
UniGeneiMm.84435

Genome annotation databases

EnsembliENSMUST00000035521; ENSMUSP00000046526; ENSMUSG00000040866
GeneIDi83434
KEGGimmu:83434
UCSCiuc009fkj.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF329192 mRNA Translation: AAK19323.1
AK029699 mRNA Translation: BAC26571.1
CCDSiCCDS20887.1
RefSeqiNP_001153143.1, NM_001159671.1
NP_112545.2, NM_031255.2
UniGeneiMm.84435

3D structure databases

SMRiQ8CDR2
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000046526

PTM databases

PhosphoSitePlusiQ8CDR2

Proteomic databases

PaxDbiQ8CDR2
PRIDEiQ8CDR2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000035521; ENSMUSP00000046526; ENSMUSG00000040866
GeneIDi83434
KEGGimmu:83434
UCSCiuc009fkj.2 mouse

Organism-specific databases

CTDi81492
MGIiMGI:1927643 Rsph6a

Phylogenomic databases

eggNOGiENOG410IF1Z Eukaryota
ENOG410XQP5 LUCA
GeneTreeiENSGT00500000044869
HOGENOMiHOG000006653
HOVERGENiHBG070874
InParanoidiQ8CDR2
OMAiVPNIMET
OrthoDBiEOG091G0FGU
PhylomeDBiQ8CDR2
TreeFamiTF324531

Miscellaneous databases

PROiPR:Q8CDR2
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000040866 Expressed in 22 organ(s), highest expression level in testis
CleanExiMM_RSHL1
ExpressionAtlasiQ8CDR2 baseline and differential
GenevisibleiQ8CDR2 MM

Family and domain databases

InterProiView protein in InterPro
IPR006802 Radial_spoke
PANTHERiPTHR13159 PTHR13159, 1 hit
PfamiView protein in Pfam
PF04712 Radial_spoke, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRSH6A_MOUSE
AccessioniPrimary (citable) accession number: Q8CDR2
Secondary accession number(s): Q99MM8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: March 1, 2003
Last modified: November 7, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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