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Protein

Battenin

Gene

Cln3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
BatteninUniRule annotation
Gene namesi
Name:Cln3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:107537 Cln3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei39 – 59HelicalUniRule annotationAdd BLAST21
Transmembranei98 – 122HelicalUniRule annotationAdd BLAST25
Transmembranei128 – 145HelicalUniRule annotationAdd BLAST18
Transmembranei181 – 200HelicalUniRule annotationAdd BLAST20
Transmembranei212 – 230HelicalUniRule annotationAdd BLAST19
Transmembranei281 – 298HelicalUniRule annotationAdd BLAST18
Transmembranei344 – 361HelicalUniRule annotationAdd BLAST18
Transmembranei367 – 390HelicalUniRule annotationAdd BLAST24

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

GenevisibleiQ8C5B1 MM

Family & Domainsi

Sequence similaritiesi

Belongs to the battenin family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiKOG3880 Eukaryota
ENOG410XT4Z LUCA
HOVERGENiHBG017297

Family and domain databases

InterProiView protein in InterPro
IPR003492 Battenin_disease_Cln3
IPR018460 Battenin_disease_Cln3_subgr
IPR036259 MFS_trans_sf
PANTHERiPTHR10981 PTHR10981, 1 hit
PfamiView protein in Pfam
PF02487 CLN3, 1 hit
PIRSFiPIRSF015974 CLN3_BTN1, 1 hit
PRINTSiPR01315 BATTENIN
SUPFAMiSSF103473 SSF103473, 1 hit

Sequencei

Sequence statusi: Complete.

Q8C5B1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSSAGSWRR LEDSEREETD SEPQAPRLDS RSVLWKNAVG FWILGLCNNF
60 70 80 90 100
SYVVMLSAAH DILKQEQASG NQSHVEPGPT PTPHNSSSRF DCNSISTAAV
110 120 130 140 150
LLADILPTLV IKLLAPLGLH LLPYSPRVLV SGVCSAGSFV LVAFSQSVGL
160 170 180 190 200
SLCGVVLGSI SSGLGEVTFL SLTAFYPSAV ISWWSSGTGG AGLLGSLSYL
210 220 230 240 250
GLTQAGLSPQ HTLLSMLGIP VLLLASYFLL LTSPEPLDPG GENEAETAAR
260 270 280 290 300
QPLIGTETPE SKPGASWDLS LQERWTVFKG LLWYIIPLVL VYFAEYFINQ
310 320 330 340 350
GLFELLFFRN TSLSHAQQYR WYQMLYQAGV FASRSSLQCC RIRFTWVLAL
360 370 380 390 400
LQCLNLALLL ADVCLNFLPS IYLIFIIILY EGLLGGAAYV NTFHNIALET
410 420 430
SDKHREFAME AACISDTLGI SLSGVLALPL HDFLCHLP
Length:438
Mass (Da):47,643
Last modified:March 1, 2003 - v1
Checksum:i2B812AB044B2F80C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK078976 mRNA Translation: BAC37491.1
UniGeneiMm.268930

Similar proteinsi

Entry informationi

Entry nameiQ8C5B1_MOUSE
AccessioniPrimary (citable) accession number: Q8C5B1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2003
Last sequence update: March 1, 2003
Last modified: January 31, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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