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Entry version 129 (08 May 2019)
Sequence version 1 (01 Mar 2003)
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Protein

Periodic tryptophan protein 2 homolog

Gene

Pwp2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-MMU-6791226 Major pathway of rRNA processing in the nucleolus and cytosol

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Periodic tryptophan protein 2 homolog
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Pwp2
Synonyms:Pwp2h
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 10

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1341200 Pwp2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000511761 – 919Periodic tryptophan protein 2 homologAdd BLAST919

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei55N6-acetyllysineCombined sources1
Modified residuei891PhosphothreonineCombined sources1
Modified residuei895PhosphoserineCombined sources1
Modified residuei898PhosphoserineCombined sources1
Modified residuei902PhosphoserineCombined sources1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q8BU03

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q8BU03

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q8BU03

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8BU03

PRoteomics IDEntifications database

More...
PRIDEi
Q8BU03

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8BU03

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q8BU03

SwissPalm database of S-palmitoylation events

More...
SwissPalmi
Q8BU03

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000032834 Expressed in 266 organ(s), highest expression level in secondary oocyte

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8BU03 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8BU03 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
225929, 3 interactors

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000045812

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8BU03

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati12 – 50WD 1Add BLAST39
Repeati53 – 93WD 2Add BLAST41
Repeati94 – 132WD 3Add BLAST39
Repeati142 – 181WD 4Add BLAST40
Repeati186 – 225WD 5Add BLAST40
Repeati286 – 325WD 6Add BLAST40
Repeati328 – 368WD 7Add BLAST41
Repeati371 – 410WD 8Add BLAST40
Repeati413 – 452WD 9Add BLAST40
Repeati456 – 498WD 10Add BLAST43
Repeati499 – 538WD 11Add BLAST40
Repeati541 – 580WD 12Add BLAST40
Repeati603 – 642WD 13Add BLAST40
Repeati700 – 740WD 14Add BLAST41

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the WD repeat PWP2 family.Curated

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0291 Eukaryota
ENOG410XP2P LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00550000074981

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000160363

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8BU03

KEGG Orthology (KO)

More...
KOi
K14558

Identification of Orthologs from Complete Genome Data

More...
OMAi
HRTYTGH

Database of Orthologous Groups

More...
OrthoDBi
290630at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8BU03

TreeFam database of animal gene trees

More...
TreeFami
TF300853

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.130.10.10, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR027145 PWP2
IPR011047 Quinoprotein_ADH-like_supfam
IPR007148 SSU_processome_Utp12
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom

The PANTHER Classification System

More...
PANTHERi
PTHR19858 PTHR19858, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF04003 Utp12, 1 hit
PF00400 WD40, 3 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00320 GPROTEINBRPT

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00320 WD40, 13 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50998 SSF50998, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 4 hits
PS50294 WD_REPEATS_REGION, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q8BU03-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKFAYRFSNL LGTVYRCGNL NFTHDGNSVI SPVGNRVTVF DLKNNRSNTL
60 70 80 90 100
PLATKYNIKC VGLSPDGRLA IIVDEGGAAL LVSLVCRSVL HHFHFKGSVH
110 120 130 140 150
SVSFSPDGRK FVVTKGNIAQ MYHAPGKKRE FNAFVLDKTY FGPYDETTCI
160 170 180 190 200
DWTDDSKCFV VGSKDMSTWV FGAERWDNLI YYALSGHKDA IVACFFESNS
210 220 230 240 250
LDLYSLSQDG ALCVWQCDTP PEGLRLKAPR GWKADILQRE KEEEEEDEEE
260 270 280 290 300
GDRETTIRGK TTPAEQERVG KVKYSRLAKY FLNKEGDFNN LTSAAYHKKT
310 320 330 340 350
HLLVTGFASG IFHLHELPEF NLIHSLSISD QRVASVAINS SGDWIAFGCS
360 370 380 390 400
GMGQLLVWEW QSESYVLKQQ GHFNSMVALA YSPDGQYIVT GGDDGKVKVW
410 420 430 440 450
NTLSGFCFVT LTEHSSGVTG VTFTTTGHVI VTSSLDGTVR AFDLHRYRNF
460 470 480 490 500
RTFTSPRPTQ FSCVAVDSSG EIVSAGAQDS FEIFVWSMQT GRLLDVLSGH
510 520 530 540 550
EGPVSGLCFN PMKSILASAS WDKTVRLWDM FDSWRTKETL TLTSDALAVT
560 570 580 590 600
FRPDGAELAV ATLNSQITFW DPENAVQVGS IEGRHDLKTG RKELDKITAK
610 620 630 640 650
HSAKGKAFTT LCYSADGQSI LAGGMSKFVC LYHVREQILV KRFELSCNLS
660 670 680 690 700
LDAMEEFLNR RKMTEFGNLA LIDQDAGEEN GVAVPLPGVR KGDMSSRHFK
710 720 730 740 750
PEIRVTSLRF SPTGRCWAAT STEGLLIFSL DAQMLFDPFE LDTSVTPGRI
760 770 780 790 800
REALRQREFT RAILMAFRLN EKKLAQEALE AVPQNEIEVV STSLPELYVV
810 820 830 840 850
KVLEFLAASF EESRHLEFYL IWTQKLLMSH GQRLKSRAGQ LLPVVQFLQK
860 870 880 890 900
GLQRHLDDVS KLCDWNRFNI QYVLAVSKQR GMKRTLEPVD TEEDSDASDE
910
DSLHLLRAAG EEEEEEMLI
Length:919
Mass (Da):102,910
Last modified:March 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i4B9BAC5B60A6A2D0
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti202D → H in BAC40686 (PubMed:16141072).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK088254 mRNA Translation: BAC40239.1
AK088983 mRNA Translation: BAC40686.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS35958.1

NCBI Reference Sequences

More...
RefSeqi
NP_083822.1, NM_029546.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000042556; ENSMUSP00000045812; ENSMUSG00000032834

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
110816

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:110816

UCSC genome browser

More...
UCSCi
uc007fxk.1 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK088254 mRNA Translation: BAC40239.1
AK088983 mRNA Translation: BAC40686.1
CCDSiCCDS35958.1
RefSeqiNP_083822.1, NM_029546.2

3D structure databases

SMRiQ8BU03
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi225929, 3 interactors
STRINGi10090.ENSMUSP00000045812

PTM databases

iPTMnetiQ8BU03
PhosphoSitePlusiQ8BU03
SwissPalmiQ8BU03

Proteomic databases

EPDiQ8BU03
jPOSTiQ8BU03
MaxQBiQ8BU03
PaxDbiQ8BU03
PRIDEiQ8BU03

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000042556; ENSMUSP00000045812; ENSMUSG00000032834
GeneIDi110816
KEGGimmu:110816
UCSCiuc007fxk.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
5822
MGIiMGI:1341200 Pwp2

Phylogenomic databases

eggNOGiKOG0291 Eukaryota
ENOG410XP2P LUCA
GeneTreeiENSGT00550000074981
HOGENOMiHOG000160363
InParanoidiQ8BU03
KOiK14558
OMAiHRTYTGH
OrthoDBi290630at2759
PhylomeDBiQ8BU03
TreeFamiTF300853

Enzyme and pathway databases

ReactomeiR-MMU-6791226 Major pathway of rRNA processing in the nucleolus and cytosol

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Pwp2 mouse

Protein Ontology

More...
PROi
PR:Q8BU03

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000032834 Expressed in 266 organ(s), highest expression level in secondary oocyte
ExpressionAtlasiQ8BU03 baseline and differential
GenevisibleiQ8BU03 MM

Family and domain databases

Gene3Di2.130.10.10, 2 hits
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR027145 PWP2
IPR011047 Quinoprotein_ADH-like_supfam
IPR007148 SSU_processome_Utp12
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
PANTHERiPTHR19858 PTHR19858, 1 hit
PfamiView protein in Pfam
PF04003 Utp12, 1 hit
PF00400 WD40, 3 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 13 hits
SUPFAMiSSF50998 SSF50998, 2 hits
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 2 hits
PS50082 WD_REPEATS_2, 4 hits
PS50294 WD_REPEATS_REGION, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPWP2_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8BU03
Secondary accession number(s): Q8BTR0
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 9, 2003
Last sequence update: March 1, 2003
Last modified: May 8, 2019
This is version 129 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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