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Entry version 131 (02 Jun 2021)
Sequence version 2 (11 Sep 2007)
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Protein

PHD finger protein 23

Gene

Phf23

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Acts as a negative regulator of autophagy, through promoting ubiquitination and degradation of LRSAM1, an E3 ubiquitin ligase that promotes autophagy in response to starvation or infecting bacteria.

By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) and type(s) of zinc fingers within the protein.<p><a href='/help/zn_fing' target='_top'>More...</a></p>Zinc fingeri337 – 385PHD-typeAdd BLAST49

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processAutophagy, Ubl conjugation pathway
LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
PHD finger protein 23By similarity
Alternative name(s):
PDH-containing protein JUNE-11 Publication
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Phf23By similarity
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 11

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:1925496, Phf23

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Cytoplasm, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003028311 – 401PHD finger protein 23Add BLAST401

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei1N-acetylmethionineBy similarity1
Modified residuei124PhosphoserineBy similarity1
Modified residuei147PhosphoserineBy similarity1
Modified residuei150PhosphoserineBy similarity1
Modified residuei313PhosphoserineBy similarity1
Modified residuei314PhosphoserineBy similarity1
Modified residuei315PhosphoserineBy similarity1
Modified residuei398PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q8BSN5

jPOST - Japan Proteome Standard Repository/Database

More...
jPOSTi
Q8BSN5

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q8BSN5

PeptideAtlas

More...
PeptideAtlasi
Q8BSN5

PRoteomics IDEntifications database

More...
PRIDEi
Q8BSN5

ProteomicsDB: a multi-organism proteome resource

More...
ProteomicsDBi
287700 [Q8BSN5-1]
287701 [Q8BSN5-2]
287702 [Q8BSN5-3]

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q8BSN5

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q8BSN5

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000018572, Expressed in blood and 321 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8BSN5, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8BSN5, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with LRSAM1.

By similarity

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
Q8BSN5, 1 interactor

Molecular INTeraction database

More...
MINTi
Q8BSN5

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000018716

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q8BSN5, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8BSN5

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 30DisorderedSequence analysisAdd BLAST30
Regioni50 – 123DisorderedSequence analysisAdd BLAST74
Regioni139 – 320DisorderedSequence analysisAdd BLAST182

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular type of amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi100 – 122Polar residuesSequence analysisAdd BLAST23
Compositional biasi244 – 263Acidic residuesSequence analysisAdd BLAST20
Compositional biasi270 – 287Pro residuesSequence analysisAdd BLAST18
Compositional biasi299 – 314Polar residuesSequence analysisAdd BLAST16

<p>This subsection of the 'Family and domains' section provides general information on the biological role of a domain. The term 'domain' is intended here in its wide acceptation, it may be a structural domain, a transmembrane region or a functional domain. Several domains are described in this subsection.<p><a href='/help/domain_cc' target='_top'>More...</a></p>Domaini

The PHD-type zinc-finger domain is required for interaction with LRSAM1 and negative regulation of autophagy.By similarity

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the PHF23 family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri337 – 385PHD-typeAdd BLAST49

Keywords - Domaini

Zinc-finger

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1844, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00530000063882

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_047981_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8BSN5

Identification of Orthologs from Complete Genome Data

More...
OMAi
SGHKKDP

Database of Orthologous Groups

More...
OrthoDBi
982722at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q8BSN5

TreeFam database of animal gene trees

More...
TreeFami
TF331373

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011011, Znf_FYVE_PHD
IPR001965, Znf_PHD
IPR019787, Znf_PHD-finger
IPR013083, Znf_RING/FYVE/PHD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00628, PHD, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00249, PHD, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57903, SSF57903, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 3 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q8BSN5-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MLEAMAEPSP EDPPPTLKPE TQPPEKRRRT IEDFNKFCSF VLAYAGYIPP
60 70 80 90 100
SKEESDWPAS GSSSPLRGES AADSDGWDSA PSDLRTIQTF VKKAKSSKRR
110 120 130 140 150
AVQSGPTQPG PPRSTFSRLQ APDSATLLEK MKLKDSLFDL DGPKVASPLS
160 170 180 190 200
PTSLTHTSRP PAALAPVPLS QGDLSQPRKK DRKNRKLGPG GGAGFGVLRR
210 220 230 240 250
PRPAPGDGEK RSRIKKSKKR KLKKADRGDR LPPPGPPRAP PSDTDSEEEE
260 270 280 290 300
EEEEEEDDEE EMTVGGGVPA PVLPTPPEAP RPPVTVHSEG APPTDSEGKD
310 320 330 340 350
VGSTETSQDG DASSSEGEMR VMDEDIMVES GDDSWDLITC YCRKPFAGRP
360 370 380 390 400
MIECSLCGTW IHLSCAKIKK TNVPDFFYCQ KCKELRPEAR RLGGLPKSGE

P
Length:401
Mass (Da):43,547
Last modified:September 11, 2007 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i831B8984C13F554F
GO
Isoform 2 (identifier: Q8BSN5-2) [UniParc]FASTAAdd to basket
Also known as: JUNE1A

The sequence of this isoform differs from the canonical sequence as follows:
     54-120: Missing.

Show »
Length:334
Mass (Da):36,418
Checksum:i249882E0FF2994BA
GO
Isoform 3 (identifier: Q8BSN5-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-130: Missing.

Show »
Length:271
Mass (Da):29,359
Checksum:i23558739BC97030B
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
B0QZH9B0QZH9_MOUSE
PHD finger protein 23
Phf23
193Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH33533 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAC25679 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti9S → R in BAB31562 (PubMed:16141072).Curated1
Sequence conflicti149L → P in BAC27285 (PubMed:16141072).Curated1
Sequence conflicti382C → Y in BAC27285 (PubMed:16141072).Curated1

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0279641 – 130Missing in isoform 3. 1 PublicationAdd BLAST130
Alternative sequenceiVSP_02796554 – 120Missing in isoform 2. 2 PublicationsAdd BLAST67

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AY099326 mRNA Translation: AAM44127.1
AY099327 mRNA Translation: AAM44128.1
AK019135 mRNA Translation: BAB31562.1
AK027950 mRNA Translation: BAC25679.1 Different initiation.
AK029376 mRNA Translation: BAC26426.1
AK031159 mRNA Translation: BAC27285.1
AK170729 mRNA Translation: BAE41985.1
AL596185 Genomic DNA No translation available.
BC033533 mRNA Translation: AAH33533.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS24929.1 [Q8BSN5-1]
CCDS70223.1 [Q8BSN5-2]
CCDS78976.1 [Q8BSN5-3]

NCBI Reference Sequences

More...
RefSeqi
NP_001278054.1, NM_001291125.1 [Q8BSN5-2]
NP_001278055.1, NM_001291126.1 [Q8BSN5-3]
NP_001278056.1, NM_001291127.1 [Q8BSN5-3]
NP_084340.2, NM_030064.4 [Q8BSN5-1]
XP_006534565.2, XM_006534502.2 [Q8BSN5-3]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000018716; ENSMUSP00000018716; ENSMUSG00000018572 [Q8BSN5-1]
ENSMUST00000101526; ENSMUSP00000099064; ENSMUSG00000018572 [Q8BSN5-2]
ENSMUST00000133485; ENSMUSP00000117373; ENSMUSG00000018572 [Q8BSN5-3]
ENSMUST00000135814; ENSMUSP00000120665; ENSMUSG00000018572 [Q8BSN5-3]
ENSMUST00000153684; ENSMUSP00000121780; ENSMUSG00000018572 [Q8BSN5-3]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
78246

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:78246

UCSC genome browser

More...
UCSCi
uc007jth.3, mouse [Q8BSN5-1]
uc007jti.3, mouse [Q8BSN5-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY099326 mRNA Translation: AAM44127.1
AY099327 mRNA Translation: AAM44128.1
AK019135 mRNA Translation: BAB31562.1
AK027950 mRNA Translation: BAC25679.1 Different initiation.
AK029376 mRNA Translation: BAC26426.1
AK031159 mRNA Translation: BAC27285.1
AK170729 mRNA Translation: BAE41985.1
AL596185 Genomic DNA No translation available.
BC033533 mRNA Translation: AAH33533.1 Different initiation.
CCDSiCCDS24929.1 [Q8BSN5-1]
CCDS70223.1 [Q8BSN5-2]
CCDS78976.1 [Q8BSN5-3]
RefSeqiNP_001278054.1, NM_001291125.1 [Q8BSN5-2]
NP_001278055.1, NM_001291126.1 [Q8BSN5-3]
NP_001278056.1, NM_001291127.1 [Q8BSN5-3]
NP_084340.2, NM_030064.4 [Q8BSN5-1]
XP_006534565.2, XM_006534502.2 [Q8BSN5-3]

3D structure databases

SMRiQ8BSN5
ModBaseiSearch...

Protein-protein interaction databases

IntActiQ8BSN5, 1 interactor
MINTiQ8BSN5
STRINGi10090.ENSMUSP00000018716

PTM databases

iPTMnetiQ8BSN5
PhosphoSitePlusiQ8BSN5

Proteomic databases

EPDiQ8BSN5
jPOSTiQ8BSN5
PaxDbiQ8BSN5
PeptideAtlasiQ8BSN5
PRIDEiQ8BSN5
ProteomicsDBi287700 [Q8BSN5-1]
287701 [Q8BSN5-2]
287702 [Q8BSN5-3]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...
Antibodypediai
23960, 50 antibodies

Genome annotation databases

EnsembliENSMUST00000018716; ENSMUSP00000018716; ENSMUSG00000018572 [Q8BSN5-1]
ENSMUST00000101526; ENSMUSP00000099064; ENSMUSG00000018572 [Q8BSN5-2]
ENSMUST00000133485; ENSMUSP00000117373; ENSMUSG00000018572 [Q8BSN5-3]
ENSMUST00000135814; ENSMUSP00000120665; ENSMUSG00000018572 [Q8BSN5-3]
ENSMUST00000153684; ENSMUSP00000121780; ENSMUSG00000018572 [Q8BSN5-3]
GeneIDi78246
KEGGimmu:78246
UCSCiuc007jth.3, mouse [Q8BSN5-1]
uc007jti.3, mouse [Q8BSN5-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
79142
MGIiMGI:1925496, Phf23

Phylogenomic databases

eggNOGiKOG1844, Eukaryota
GeneTreeiENSGT00530000063882
HOGENOMiCLU_047981_1_0_1
InParanoidiQ8BSN5
OMAiSGHKKDP
OrthoDBi982722at2759
PhylomeDBiQ8BSN5
TreeFamiTF331373

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...
BioGRID-ORCSi
78246, 17 hits in 55 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Phf23, mouse

Protein Ontology

More...
PROi
PR:Q8BSN5
RNActiQ8BSN5, protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000018572, Expressed in blood and 321 other tissues
ExpressionAtlasiQ8BSN5, baseline and differential
GenevisibleiQ8BSN5, MM

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR011011, Znf_FYVE_PHD
IPR001965, Znf_PHD
IPR019787, Znf_PHD-finger
IPR013083, Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00628, PHD, 1 hit
SMARTiView protein in SMART
SM00249, PHD, 1 hit
SUPFAMiSSF57903, SSF57903, 1 hit

MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiPHF23_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8BSN5
Secondary accession number(s): Q3TCH1
, Q8BT31, Q8CDY2, Q8CIA4, Q8CIU8, Q8CIU9, Q9CWC8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: September 11, 2007
Last modified: June 2, 2021
This is version 131 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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