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Protein

LIX1-like protein

Gene

Lix1l

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
LIX1-like protein
Gene namesi
Name:Lix1l
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Unplaced

Organism-specific databases

MGIiMGI:3036267 Lix1l

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002328731 – 337LIX1-like proteinAdd BLAST337

Proteomic databases

MaxQBiQ8BQ89
PaxDbiQ8BQ89
PRIDEiQ8BQ89

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000057623

Structurei

3D structure databases

ProteinModelPortaliQ8BQ89
SMRiQ8BQ89
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the LIX1 family.Curated

Phylogenomic databases

eggNOGiENOG410IH13 Eukaryota
ENOG410XRZR LUCA
HOGENOMiHOG000237359
HOVERGENiHBG079509
InParanoidiQ8BQ89
KOiK16673
PhylomeDBiQ8BQ89

Family and domain databases

InterProiView protein in InterPro
IPR029270 LIX1
PfamiView protein in Pfam
PF14954 LIX1, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

Q8BQ89-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
METMRAQRLQ PGVGVGGRGT LRALRPGVTG APTSAATPPV GPPPAPPPPA
60 70 80 90 100
PPLPPLLLAG APGLPLPPGA AGSPAVLREA VEAVVRSFAK HTQGYGRVNV
110 120 130 140 150
VEALQEFWQM KQSRGADLKN GALVVYEMVP SNSPPYVCYV TLPGGSCFGS
160 170 180 190 200
FQFCPTKAEA RRSAAKIALM NSVFNEHPSR RITDEFIEKS VSEALASFNG
210 220 230 240 250
NREEADNPNT GIGAFRFMLE SNKGKSMLEF QELMTVFQLL HWNGSLKAMR
260 270 280 290 300
ERQCSRQEVL AHYSHRALDD DIRHQMALDW VSREQSVPGA LSRELASTER
310 320 330
ELDEARLAGK ELRFHKEKKD ILMLAAGQLG NMHSSSC
Length:337
Mass (Da):36,606
Last modified:April 18, 2006 - v2
Checksum:i2075666FCBC06396
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3X9C8G3X9C8_MOUSE
LIX1-like protein
Lix1l mCG_14859
337Annotation score:

Sequence cautioni

The sequence BAC34588 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK051276 mRNA Translation: BAC34588.1 Different initiation.
CCDSiCCDS51004.1
RefSeqiNP_001156642.1, NM_001163170.1
UniGeneiMm.482147

Genome annotation databases

GeneIDi280411
KEGGimmu:280411

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK051276 mRNA Translation: BAC34588.1 Different initiation.
CCDSiCCDS51004.1
RefSeqiNP_001156642.1, NM_001163170.1
UniGeneiMm.482147

3D structure databases

ProteinModelPortaliQ8BQ89
SMRiQ8BQ89
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000057623

Proteomic databases

MaxQBiQ8BQ89
PaxDbiQ8BQ89
PRIDEiQ8BQ89

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi280411
KEGGimmu:280411

Organism-specific databases

CTDi128077
MGIiMGI:3036267 Lix1l

Phylogenomic databases

eggNOGiENOG410IH13 Eukaryota
ENOG410XRZR LUCA
HOGENOMiHOG000237359
HOVERGENiHBG079509
InParanoidiQ8BQ89
KOiK16673
PhylomeDBiQ8BQ89

Miscellaneous databases

ChiTaRSiLix1l mouse
PROiPR:Q8BQ89
SOURCEiSearch...

Family and domain databases

InterProiView protein in InterPro
IPR029270 LIX1
PfamiView protein in Pfam
PF14954 LIX1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiLIX1L_MOUSE
AccessioniPrimary (citable) accession number: Q8BQ89
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 10, 2017
This is version 78 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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