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Protein

tRNA (uracil-5-)-methyltransferase homolog A

Gene

Trmt2a

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:3 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Miscellaneous

Htf9a (RanBP1) and Trmt2a are transcribed with opposite polarity from complementary DNA strands from a shared bidirectional TATA-less promoter.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Function’ section describes the interaction between a single amino acid and another chemical entity. Priority is given to the annotation of physiological ligands.<p><a href='/help/binding' target='_top'>More...</a></p>Binding sitei401S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei451S-adenosyl-L-methioninePROSITE-ProRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionMethyltransferase, RNA-binding, Transferase
LigandS-adenosyl-L-methionine

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
tRNA (uracil-5-)-methyltransferase homolog A (EC:2.1.1.-)
Alternative name(s):
HpaII tiny fragments locus 9c protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Trmt2a
Synonyms:Htf9-c, Htf9c
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 16

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:96270 Trmt2a

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000816151 – 574tRNA (uracil-5-)-methyltransferase homolog AAdd BLAST574

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei368PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...
EPDi
Q8BNV1

MaxQB - The MaxQuant DataBase

More...
MaxQBi
Q8BNV1

PeptideAtlas

More...
PeptideAtlasi
Q8BNV1

PRoteomics IDEntifications database

More...
PRIDEi
Q8BNV1

PTM databases

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q8BNV1

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the ‘Expression’ section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified ‘at protein level’. <br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Widely expressed at low level. Expressed at higher level in proliferating cells.

<p>This subsection of the ‘Expression’ section reports the experimentally proven effects of inducers and repressors (usually chemical compounds or environmental factors) on the level of protein (or mRNA) expression (up-regulation, down-regulation, constitutive expression).<p><a href='/help/induction' target='_top'>More...</a></p>Inductioni

In a cell-cycle manner. Transcription is activated at the G1/S transition of the cell cycle and peaks in S phase, while being repressed in quiescent tissues and growth-arrested cells.

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000022721 Expressed in 278 organ(s), highest expression level in bone marrow

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q8BNV1 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q8BNV1 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

Protein interaction database and analysis system

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IntActi
Q8BNV1, 1 interactor

Molecular INTeraction database

More...
MINTi
Q8BNV1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

Protein Model Portal of the PSI-Nature Structural Biology Knowledgebase

More...
ProteinModelPortali
Q8BNV1

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
Q8BNV1

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini63 – 136RRMAdd BLAST74

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili170 – 200Sequence analysisAdd BLAST31

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00530000063723

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
HOG000232103

The HOVERGEN Database of Homologous Vertebrate Genes

More...
HOVERGENi
HBG052043

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q8BNV1

KEGG Orthology (KO)

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KOi
K15332

Database of Orthologous Groups

More...
OrthoDBi
248059at2759

Family and domain databases

Conserved Domains Database

More...
CDDi
cd12439 RRM_TRMT2A, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.70.330, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR029063 SAM-dependent_MTases
IPR034262 TRMT2A_RRM
IPR010280 U5_MeTrfase_fam

The PANTHER Classification System

More...
PANTHERi
PTHR11061 PTHR11061, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53335 SSF53335, 1 hit
SSF54928 SSF54928, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51687 SAM_MT_RNA_M5U, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

Q8BNV1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSEPAAEVPE PMEDCGQDAS AVPSSAAPLC QKEEAGPGPA AGPGTQPGLY
60 70 80 90 100
SYIRDDLFTS EIFKLELQNV PRHASFSDVR RFLGRFGLQS HKIKLFGQPP
110 120 130 140 150
CAFVTFRSAA ERDKALRVLH GALWKGCPLS VRLARPKADP MARKRRQEGD
160 170 180 190 200
SEPSVTQIAD VVTPLWTVPY TEQLEQKRLE CERVLQKLAK EIGNTNRALL
210 220 230 240 250
PWLLLQRQQH NKACCPLEGV KPSPQQTEYR NKCEFLVGVG VDGKDNTVGC
260 270 280 290 300
RLGKYKGGTC AVAAPFDTVH IPEATKQVVK AFQEFIRSTP YSAYDPETYT
310 320 330 340 350
GHWKQLTVRT SSRGQAMAIA YFHPQKLSSE EVAGLKASLV CHFMEGPGKA
360 370 380 390 400
SGVTSLYFVE EGQRKTPSQE GLPLEHMAGD QCIQEDLLGL TFRISPHAFF
410 420 430 440 450
QVNTPAAEVL YTVIQEWAQL DGGSTVLDVC CGTGTIGLAL APKVKRVVGI
460 470 480 490 500
ELCQEAVEDA RMNALTNDSK VILAIRKAEN IKRLLYVSCN PRAAMGNFVD
510 520 530 540 550
LCRAPSNRVK GTPFHPVKAV AVDLFPQTPH CEMLILFERM QQHPNGIEAL
560 570
EHQEFQTPRN LPDITPQETE ISLS
Length:574
Mass (Da):63,301
Last modified:March 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA93507402A3D3BED
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q3UYU2Q3UYU2_MOUSE
HpaII tinys locus 9c, isoform CRA_a
Trmt2a Htf9c, mCG_131829
613Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
E9PUQ7E9PUQ7_MOUSE
tRNA (uracil-5-)-methyltransferase ...
Trmt2a
613Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6ZHN3F6ZHN3_MOUSE
tRNA (uracil-5-)-methyltransferase ...
Trmt2a
281Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A338P6I4A0A338P6I4_MOUSE
tRNA (uracil-5-)-methyltransferase ...
Trmt2a
76Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F6SY41F6SY41_MOUSE
tRNA (uracil-5-)-methyltransferase ...
Trmt2a
70Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A338P7F8A0A338P7F8_MOUSE
tRNA (uracil-5-)-methyltransferase ...
Trmt2a
74Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the ‘Sequence’ section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence AAH46976 differs from that shown. Reason: Erroneous initiation.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Sequence’ section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti1 – 46MSEPA…GPGTQ → MWTGWAEVGWGSSHYCRIKD RMGENWVSRVKERVSPGLRG VCTNGDLSAVWGSESYQLEP SARPVCSHVGSGAHGGLRPG LPSCTPALRPHYVKKRKQGL GQLQGLERK (PubMed:1889746).CuratedAdd BLAST46
Sequence conflicti1 – 46MSEPA…GPGTQ → MWTGWAEVGWGSSHYCRIKD RMGENWVSRVKERVSPGLRG VCTNGDLSAVWGSESYQLEP SARPVCSHVGSGAHGGLRPG LPSCTPALRPHYVKKRKQGL GQLQGLERK (PubMed:9224656).CuratedAdd BLAST46
Sequence conflicti115A → G (PubMed:1889746).Curated1
Sequence conflicti115A → G (PubMed:9224656).Curated1
Sequence conflicti130 – 145SVRLA…MARKR → AYAWPDPRLTPWLGRG (PubMed:1889746).CuratedAdd BLAST16
Sequence conflicti130 – 145SVRLA…MARKR → AYAWPDPRLTPWLGRG (PubMed:9224656).CuratedAdd BLAST16
Sequence conflicti158 – 190IADVV…QKLAK → SCRCGDPSVDTALHVSSWSR SDWNVSGCYRNLAR (PubMed:1889746).CuratedAdd BLAST33
Sequence conflicti158 – 190IADVV…QKLAK → SCRCGDPSVDTALHVSSWSR SDWNVSGCYRNLAR (PubMed:9224656).CuratedAdd BLAST33
Sequence conflicti468D → ELSNVEFHCGRAEDLVPGLV SRLSSHQLVAVLDPPRAGLH (PubMed:1889746).Curated1
Sequence conflicti468D → ELSNVEFHCGRAEDLVPGLV SRLSSHQLVAVLDPPRAGLH (PubMed:9224656).Curated1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

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DDBJi
Links Updated
X56044 mRNA Translation: CAA39515.1
X05830 Genomic DNA Translation: CAA29277.1
AK080170 mRNA Translation: BAC37838.1
BC046976 mRNA Translation: AAH46976.1 Different initiation.

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS57020.1

Protein sequence database of the Protein Information Resource

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PIRi
S01176

NCBI Reference Sequences

More...
RefSeqi
NP_001074468.1, NM_001080999.2
NP_001074469.1, NM_001081000.2
NP_001182134.1, NM_001195205.1

UniGene gene-oriented nucleotide sequence clusters

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UniGenei
Mm.271798

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000140206; ENSMUSP00000121216; ENSMUSG00000022721
ENSMUST00000183589; ENSMUSP00000139374; ENSMUSG00000098930

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
15547

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:15547

UCSC genome browser

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UCSCi
uc007ync.2 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X56044 mRNA Translation: CAA39515.1
X05830 Genomic DNA Translation: CAA29277.1
AK080170 mRNA Translation: BAC37838.1
BC046976 mRNA Translation: AAH46976.1 Different initiation.
CCDSiCCDS57020.1
PIRiS01176
RefSeqiNP_001074468.1, NM_001080999.2
NP_001074469.1, NM_001081000.2
NP_001182134.1, NM_001195205.1
UniGeneiMm.271798

3D structure databases

ProteinModelPortaliQ8BNV1
SMRiQ8BNV1
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ8BNV1, 1 interactor
MINTiQ8BNV1

PTM databases

PhosphoSitePlusiQ8BNV1

Proteomic databases

EPDiQ8BNV1
MaxQBiQ8BNV1
PeptideAtlasiQ8BNV1
PRIDEiQ8BNV1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000140206; ENSMUSP00000121216; ENSMUSG00000022721
ENSMUST00000183589; ENSMUSP00000139374; ENSMUSG00000098930
GeneIDi15547
KEGGimmu:15547
UCSCiuc007ync.2 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
27037
MGIiMGI:96270 Trmt2a

Phylogenomic databases

GeneTreeiENSGT00530000063723
HOGENOMiHOG000232103
HOVERGENiHBG052043
InParanoidiQ8BNV1
KOiK15332
OrthoDBi248059at2759

Miscellaneous databases

Protein Ontology

More...
PROi
PR:Q8BNV1

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000022721 Expressed in 278 organ(s), highest expression level in bone marrow
ExpressionAtlasiQ8BNV1 baseline and differential
GenevisibleiQ8BNV1 MM

Family and domain databases

CDDicd12439 RRM_TRMT2A, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR029063 SAM-dependent_MTases
IPR034262 TRMT2A_RRM
IPR010280 U5_MeTrfase_fam
PANTHERiPTHR11061 PTHR11061, 2 hits
SUPFAMiSSF53335 SSF53335, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS51687 SAM_MT_RNA_M5U, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiTRM2A_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8BNV1
Secondary accession number(s): P70221
, P70222, Q78E15, Q80VN8
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: March 1, 2003
Last modified: January 16, 2019
This is version 118 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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