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Protein

LHFPL tetraspan subfamily member 6 protein

Gene

Lhfpl6

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
LHFPL tetraspan subfamily member 6 proteinBy similarity
Alternative name(s):
Lipoma HMGIC fusion partnerImported
Gene namesi
Name:Lhfpl6By similarity
Synonyms:LhfpImported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:1920048 Lhfp

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei84 – 104HelicalSequence analysisAdd BLAST21
Transmembranei123 – 143HelicalSequence analysisAdd BLAST21
Transmembranei166 – 186HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_000024475724 – 200LHFPL tetraspan subfamily member 6 proteinAdd BLAST177

Proteomic databases

PaxDbiQ8BM86
PeptideAtlasiQ8BM86
PRIDEiQ8BM86

PTM databases

PhosphoSitePlusiQ8BM86

Expressioni

Gene expression databases

BgeeiENSMUSG00000048332 Expressed in 255 organ(s), highest expression level in aorta
CleanExiMM_LHFP
GenevisibleiQ8BM86 MM

Structurei

3D structure databases

ProteinModelPortaliQ8BM86
SMRiQ8BM86
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the LHFP family.Curated

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG4026 Eukaryota
ENOG410XSUB LUCA
GeneTreeiENSGT00550000074479
HOGENOMiHOG000007007
HOVERGENiHBG080585
InParanoidiQ8BM86
OMAiSTEWRIC
OrthoDBiEOG091G10EV
PhylomeDBiQ8BM86
TreeFamiTF321143

Family and domain databases

InterProiView protein in InterPro
IPR019372 LHFPL
PANTHERiPTHR12489 PTHR12489, 1 hit
PfamiView protein in Pfam
PF10242 L_HMGIC_fpl, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q8BM86-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASSLTCTGV IWALLSFLSA ATSCVGFFMP YWLWGSQLGK PVSFGTFRRC
60 70 80 90 100
SYPVHDESRQ MMVMVEECGR YASFQGIPST EWRICTIVTG LGCGLLLLVA
110 120 130 140 150
LTALMGCCVS ELISRTVGRV AGGIQFLGGL LIGAGCALYP LGWDSEEVRQ
160 170 180 190 200
TCGYISGQFD LGKCEIGWAY YCTGAGAAAA MLLCTWMACF SGKKQKHYPY
Length:200
Mass (Da):21,626
Last modified:March 1, 2003 - v1
Checksum:iB79B02170291C9A1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti95L → P in BAE35174 (PubMed:15489334).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034532 mRNA Translation: BAC28745.1
AK159126 mRNA Translation: BAE34840.1
AK159549 mRNA Translation: BAE35174.1
AK172390 mRNA Translation: BAE42980.1
AK172532 mRNA Translation: BAE43053.1
BC052079 mRNA Translation: AAH52079.1
BC095934 mRNA Translation: AAH95934.1
CCDSiCCDS17344.1
RefSeqiNP_780595.1, NM_175386.3
UniGeneiMm.118617

Genome annotation databases

EnsembliENSMUST00000059562; ENSMUSP00000056364; ENSMUSG00000048332
ENSMUST00000147139; ENSMUSP00000119019; ENSMUSG00000048332
GeneIDi108927
KEGGimmu:108927
UCSCiuc008pep.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK034532 mRNA Translation: BAC28745.1
AK159126 mRNA Translation: BAE34840.1
AK159549 mRNA Translation: BAE35174.1
AK172390 mRNA Translation: BAE42980.1
AK172532 mRNA Translation: BAE43053.1
BC052079 mRNA Translation: AAH52079.1
BC095934 mRNA Translation: AAH95934.1
CCDSiCCDS17344.1
RefSeqiNP_780595.1, NM_175386.3
UniGeneiMm.118617

3D structure databases

ProteinModelPortaliQ8BM86
SMRiQ8BM86
ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSitePlusiQ8BM86

Proteomic databases

PaxDbiQ8BM86
PeptideAtlasiQ8BM86
PRIDEiQ8BM86

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000059562; ENSMUSP00000056364; ENSMUSG00000048332
ENSMUST00000147139; ENSMUSP00000119019; ENSMUSG00000048332
GeneIDi108927
KEGGimmu:108927
UCSCiuc008pep.1 mouse

Organism-specific databases

CTDi108927
MGIiMGI:1920048 Lhfp

Phylogenomic databases

eggNOGiKOG4026 Eukaryota
ENOG410XSUB LUCA
GeneTreeiENSGT00550000074479
HOGENOMiHOG000007007
HOVERGENiHBG080585
InParanoidiQ8BM86
OMAiSTEWRIC
OrthoDBiEOG091G10EV
PhylomeDBiQ8BM86
TreeFamiTF321143

Miscellaneous databases

ChiTaRSiLhfp mouse
PROiPR:Q8BM86
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000048332 Expressed in 255 organ(s), highest expression level in aorta
CleanExiMM_LHFP
GenevisibleiQ8BM86 MM

Family and domain databases

InterProiView protein in InterPro
IPR019372 LHFPL
PANTHERiPTHR12489 PTHR12489, 1 hit
PfamiView protein in Pfam
PF10242 L_HMGIC_fpl, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiLHPL6_MOUSE
AccessioniPrimary (citable) accession number: Q8BM86
Secondary accession number(s): Q3T9G7, Q3TWU2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: March 1, 2003
Last modified: September 12, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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Main funding by: National Institutes of Health

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