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UniProtKB - Q8BJ71 (NUP93_MOUSE)

Entry version 150 (29 Sep 2021)
Sequence version 1 (01 Mar 2003)
Previous versions | rss
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Protein

Nuclear pore complex protein Nup93

Gene

Nup93

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance. May anchor nucleoporins, but not NUP153 and TPR, to the NPC (By similarity).

During renal development, regulates podocyte migration and proliferation through SMAD4 signaling (By similarity) (PubMed:26878725).

By similarity1 Publication

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Biological processmRNA transport, Protein transport, Translocation, Transport

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-MMU-159227, Transport of the SLBP independent Mature mRNA
R-MMU-159230, Transport of the SLBP Dependant Mature mRNA
R-MMU-159231, Transport of Mature mRNA Derived from an Intronless Transcript
R-MMU-159236, Transport of Mature mRNA derived from an Intron-Containing Transcript
R-MMU-170822, Regulation of Glucokinase by Glucokinase Regulatory Protein
R-MMU-191859, snRNP Assembly
R-MMU-3108214, SUMOylation of DNA damage response and repair proteins
R-MMU-3232142, SUMOylation of ubiquitinylation proteins
R-MMU-3301854, Nuclear Pore Complex (NPC) Disassembly
R-MMU-3371453, Regulation of HSF1-mediated heat shock response
R-MMU-4085377, SUMOylation of SUMOylation proteins
R-MMU-4551638, SUMOylation of chromatin organization proteins
R-MMU-4570464, SUMOylation of RNA binding proteins
R-MMU-4615885, SUMOylation of DNA replication proteins
R-MMU-5578749, Transcriptional regulation by small RNAs
R-MMU-9615933, Postmitotic nuclear pore complex (NPC) reformation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Nuclear pore complex protein Nup93
Alternative name(s):
93 kDa nucleoporin
CBP-interacting protein 4
Nucleoporin Nup93
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Nup93
Synonyms:Cip4, Kiaa0095
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 8

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:1919055, Nup93

Eukaryotic Pathogen, Vector and Host Database Resources

More...VEuPathDBi		HostDB:ENSMUSG00000032939

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Keywords - Cellular componenti

Membrane, Nuclear pore complex, Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001247831 – 819Nuclear pore complex protein Nup93Add BLAST819

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section specifies the position and type of each modified residue excluding <a href="http://www.uniprot.org/manual/lipid">lipids</a>, <a href="http://www.uniprot.org/manual/carbohyd">glycans</a> and <a href="http://www.uniprot.org/manual/crosslnk">protein cross-links</a>.<p><a href='/help/mod_res' target='_top'>More...</a></p>Modified residuei49PhosphothreonineBy similarity1
Modified residuei52PhosphoserineBy similarity1
Modified residuei66PhosphoserineBy similarity1
Modified residuei72PhosphoserineBy similarity1
Modified residuei75PhosphoserineBy similarity1
Modified residuei80PhosphoserineBy similarity1
Modified residuei430PhosphoserineBy similarity1
Modified residuei767PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

Encyclopedia of Proteome Dynamics

More...EPDi		Q8BJ71

jPOST - Japan Proteome Standard Repository/Database

More...jPOSTi		Q8BJ71

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		Q8BJ71

PeptideAtlas

More...PeptideAtlasi		Q8BJ71

PRoteomics IDEntifications database

More...PRIDEi		Q8BJ71

ProteomicsDB: a multi-organism proteome resource

More...ProteomicsDBi		287862 [Q8BJ71-1]
287863 [Q8BJ71-2]

2D gel databases

REPRODUCTION-2DPAGE

More...REPRODUCTION-2DPAGEi		IPI00222307
IPI00410800

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		Q8BJ71

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		Q8BJ71

SwissPalm database of S-palmitoylation events

More...SwissPalmi		Q8BJ71

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000032939, Expressed in embryonic facial prominence and 305 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		Q8BJ71, baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		Q8BJ71, MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Part of the nuclear pore complex (NPC).

Component of the p62 complex, a complex composed of NUP62 and NUP54.

Forms a complex with NUP35, NUP155, NUP205 and lamin B; the interaction with NUP35 is direct. Does not interact with TPR.

Interacts with SMAD4 and IPO7; translocates SMAD4 to the nucleus through the NPC upon BMP7 stimulation resulting in activation of SMAD4 signaling.

By similarity

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...BioGRIDi		214942, 23 interactors

ComplexPortal: manually curated resource of macromolecular complexes

More...ComplexPortali		CPX-4474, Nuclear pore complex

Protein interaction database and analysis system

More...IntActi		Q8BJ71, 5 interactors

Molecular INTeraction database

More...MINTi		Q8BJ71

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000105174

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...RNActi		Q8BJ71, protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...SMRi		Q8BJ71

Database of comparative protein structure models

More...ModBasei		Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the nucleoporin interacting component (NIC) family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG2168, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00390000016353

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_011846_1_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		Q8BJ71

Identification of Orthologs from Complete Genome Data

More...OMAi		LLMCGQF

Database of Orthologous Groups

More...OrthoDBi		187731at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		Q8BJ71

TreeFam database of animal gene trees

More...TreeFami		TF315118

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR007231, Nucleoporin_int_Nup93/Nic96

The PANTHER Classification System

More...PANTHERi		PTHR11225, PTHR11225, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF04097, Nic96, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (2+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 2 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q8BJ71-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MDTEGFGELL QQAEQLAAET EGISELPHVE RNLQEIQQAG ERLRSRTLTR 
        60         70         80         90        100
TSQETADVKA SVLLGSRGLD ISHISQRLES LSAATTFEPL EPVKDTDIQG 
       110        120        130        140        150
FLKNEKDNAL LSAIEESRKR TFGMAEEYHR ESMLVEWEQV KQRILHTLLA 
       160        170        180        190        200
SGEDALDFTQ ESEPSYIGDV NPPGRSSLDS IEMAYARQIY IYNEKIVSGH 
       210        220        230        240        250
LQPNLVDLCA SVAELDDKSI SDMWAMVKQM TDVVLTPATD ALKSRSSVEV 
       260        270        280        290        300
RMDFVKQALG YLEQSYKNYT LVTVFGNLHQ AQLGGVPGTY QLVRSFLNIK 
       310        320        330        340        350
LPAPSPGLQD GEVEGHPVWA LIYYCMRCGD LLAASQVVSR AQHQLGEFKT 
       360        370        380        390        400
WFQEYMNSKD RRLSPATENK LRLHYRRALR NNTDPYKRAV YCIIGRCDIT 
       410        420        430        440        450
DNQSEVADKT EDYLWLKLNQ VCFDDDGTSS PQDRLTLSQF QKQLLEDYGE 
       460        470        480        490        500
SHFTVNQQPF LYFQVLFLTA QFEAAIAFLF RMERLRCHAV HVALVLFELK 
       510        520        530        540        550
LLLKSSGQSA QLLSHEPGDP PCMRRLNFVR LLMLYTRKFE STDPREALQY 
       560        570        580        590        600
FYFLRDEKDS QGENMFLRCV SELVIESREF DMILGKLEND GSRKPGVIDK 
       610        620        630        640        650
FTSDTKPIIN KVASVAENKG LFEEAAKLYD LAKNADKVLE LMNKLLSPVV 
       660        670        680        690        700
PQISAPQSNK ERLKNMALSI AERYRAQGIS ANKFVDSTFY LLLDLITFFD 
       710        720        730        740        750
EYHSGHIDRA FDIIDRLKLV PLNQESVEER VAAFRNFSDE IRHNLSEVLL 
       760        770        780        790        800
ATMNILFTQF KRLKGTSPSS ATRPQRVIED RDSQLRSQAR ALITFAGMIP 
       810 
YRTSGDTNAR LVQMEVLMN
Length:819
Mass (Da):93,281
Last modified:March 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i747EA591189DAFAF
GO
Isoform 2 (identifier: Q8BJ71-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-123: Missing.

Show »
Length:696
Mass (Da):79,675
Checksum:i853C96D4637D8586
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1D5RLQ0A0A1D5RLQ0_MOUSE
Nuclear pore complex protein Nup93
Nup93
699Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A1D5RM86A0A1D5RM86_MOUSE
Nuclear pore complex protein Nup93
Nup93
18Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

<p>This subsection of the 'Sequence' section reports difference(s) between the protein sequence shown in the UniProtKB entry and other available protein sequences derived from the same gene.<p><a href='/help/sequence_caution' target='_top'>More...</a></p>Sequence cautioni

The sequence BAC97865 differs from that shown. Reason: Frameshift.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti116E → K in CAD43733 (Ref. 5) Curated1
Sequence conflicti463F → Y in BAC32337 (PubMed:16141072).Curated1
Sequence conflicti626A → V in AAH23140 (PubMed:15489334).Curated1
Sequence conflicti816 – 819VLMN → LLSWEVH in BAC32337 (PubMed:16141072).Curated4

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0100891 – 123Missing in isoform 2. 1 PublicationAdd BLAST123

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AK028864 mRNA Translation: BAC26158.1
AK045380 mRNA Translation: BAC32337.1
AK129055 Transcribed RNA Translation: BAC97865.2 Frameshift.
AK167105 mRNA Translation: BAE39254.1
AK169693 mRNA Translation: BAE41309.1
BC023140 mRNA Translation: AAH23140.1
AJ505051 Other RNA Translation: CAD43733.1

The Consensus CDS (CCDS) project

More...CCDSi		CCDS22540.1 [Q8BJ71-1]

NCBI Reference Sequences

More...RefSeqi		NP_765998.1, NM_172410.2 [Q8BJ71-1]
XP_006531437.1, XM_006531374.3
XP_006531438.1, XM_006531375.3
XP_006531439.1, XM_006531376.2 [Q8BJ71-2]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000079961; ENSMUSP00000078878; ENSMUSG00000032939 [Q8BJ71-1]
ENSMUST00000109547; ENSMUSP00000105174; ENSMUSG00000032939 [Q8BJ71-1]
ENSMUST00000212824; ENSMUSP00000148700; ENSMUSG00000032939 [Q8BJ71-1]

Database of genes from NCBI RefSeq genomes

More...GeneIDi		71805

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:71805

UCSC genome browser

More...UCSCi		uc009mvz.1, mouse [Q8BJ71-1]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK028864 mRNA Translation: BAC26158.1
AK045380 mRNA Translation: BAC32337.1
AK129055 Transcribed RNA Translation: BAC97865.2 Frameshift.
AK167105 mRNA Translation: BAE39254.1
AK169693 mRNA Translation: BAE41309.1
BC023140 mRNA Translation: AAH23140.1
AJ505051 Other RNA Translation: CAD43733.1
CCDSiCCDS22540.1 [Q8BJ71-1]
RefSeqiNP_765998.1, NM_172410.2 [Q8BJ71-1]
XP_006531437.1, XM_006531374.3
XP_006531438.1, XM_006531375.3
XP_006531439.1, XM_006531376.2 [Q8BJ71-2]

3D structure databases

SMRiQ8BJ71
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi214942, 23 interactors
ComplexPortaliCPX-4474, Nuclear pore complex
IntActiQ8BJ71, 5 interactors
MINTiQ8BJ71
STRINGi10090.ENSMUSP00000105174

PTM databases

iPTMnetiQ8BJ71
PhosphoSitePlusiQ8BJ71
SwissPalmiQ8BJ71

2D gel databases

REPRODUCTION-2DPAGEiIPI00222307
IPI00410800

Proteomic databases

EPDiQ8BJ71
jPOSTiQ8BJ71
PaxDbiQ8BJ71
PeptideAtlasiQ8BJ71
PRIDEiQ8BJ71
ProteomicsDBi287862 [Q8BJ71-1]
287863 [Q8BJ71-2]

Protocols and materials databases

Antibodypedia a portal for validated antibodies

More...Antibodypediai		14851, 135 antibodies

The DNASU plasmid repository

More...DNASUi		71805

Genome annotation databases

EnsembliENSMUST00000079961; ENSMUSP00000078878; ENSMUSG00000032939 [Q8BJ71-1]
ENSMUST00000109547; ENSMUSP00000105174; ENSMUSG00000032939 [Q8BJ71-1]
ENSMUST00000212824; ENSMUSP00000148700; ENSMUSG00000032939 [Q8BJ71-1]
GeneIDi71805
KEGGimmu:71805
UCSCiuc009mvz.1, mouse [Q8BJ71-1]

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		9688
MGIiMGI:1919055, Nup93
VEuPathDBiHostDB:ENSMUSG00000032939

Rodent Unidentified Gene-Encoded large proteins database

More...Rougei		Search...

Phylogenomic databases

eggNOGiKOG2168, Eukaryota
GeneTreeiENSGT00390000016353
HOGENOMiCLU_011846_1_0_1
InParanoidiQ8BJ71
OMAiLLMCGQF
OrthoDBi187731at2759
PhylomeDBiQ8BJ71
TreeFamiTF315118

Enzyme and pathway databases

ReactomeiR-MMU-159227, Transport of the SLBP independent Mature mRNA
R-MMU-159230, Transport of the SLBP Dependant Mature mRNA
R-MMU-159231, Transport of Mature mRNA Derived from an Intronless Transcript
R-MMU-159236, Transport of Mature mRNA derived from an Intron-Containing Transcript
R-MMU-170822, Regulation of Glucokinase by Glucokinase Regulatory Protein
R-MMU-191859, snRNP Assembly
R-MMU-3108214, SUMOylation of DNA damage response and repair proteins
R-MMU-3232142, SUMOylation of ubiquitinylation proteins
R-MMU-3301854, Nuclear Pore Complex (NPC) Disassembly
R-MMU-3371453, Regulation of HSF1-mediated heat shock response
R-MMU-4085377, SUMOylation of SUMOylation proteins
R-MMU-4551638, SUMOylation of chromatin organization proteins
R-MMU-4570464, SUMOylation of RNA binding proteins
R-MMU-4615885, SUMOylation of DNA replication proteins
R-MMU-5578749, Transcriptional regulation by small RNAs
R-MMU-9615933, Postmitotic nuclear pore complex (NPC) reformation

Miscellaneous databases

BioGRID ORCS database of CRISPR phenotype screens

More...BioGRID-ORCSi		71805, 20 hits in 62 CRISPR screens

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...ChiTaRSi		Nup93, mouse

Protein Ontology

More...PROi		PR:Q8BJ71
RNActiQ8BJ71, protein

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000032939, Expressed in embryonic facial prominence and 305 other tissues
ExpressionAtlasiQ8BJ71, baseline and differential
GenevisibleiQ8BJ71, MM

Family and domain databases

InterProiView protein in InterPro
IPR007231, Nucleoporin_int_Nup93/Nic96
PANTHERiPTHR11225, PTHR11225, 1 hit
PfamiView protein in Pfam
PF04097, Nic96, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiNUP93_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q8BJ71
Secondary accession number(s): Q3TED9
, Q8BIK7, Q8K1R4, Q8R592
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: March 1, 2003
Last modified: September 29, 2021
This is version 150 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families
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