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Protein

UPF0705 protein C11orf49 homolog

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0705 protein C11orf49 homolog
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 2

Organism-specific databases

MGIiMGI:1915079 1110051M20Rik

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002814271 – 331UPF0705 protein C11orf49 homologAdd BLAST331

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei319PhosphoserineCombined sources1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ8BHR8
PRIDEiQ8BHR8

PTM databases

iPTMnetiQ8BHR8
PhosphoSitePlusiQ8BHR8

Expressioni

Gene expression databases

BgeeiENSMUSG00000040591 Expressed in 266 organ(s), highest expression level in CA1 field of hippocampus
CleanExiMM_1110051M20RIK
ExpressionAtlasiQ8BHR8 baseline and differential
GenevisibleiQ8BHR8 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000099654

Structurei

3D structure databases

ProteinModelPortaliQ8BHR8
SMRiQ8BHR8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0705 family.Curated

Phylogenomic databases

eggNOGiENOG410IIYX Eukaryota
ENOG4110Y2Q LUCA
GeneTreeiENSGT00390000012935
HOGENOMiHOG000231517
HOVERGENiHBG056002
InParanoidiQ8BHR8
OMAiHVLFREF
OrthoDBiEOG091G0AWI
PhylomeDBiQ8BHR8
TreeFamiTF329168

Family and domain databases

InterProiView protein in InterPro
IPR038968 C11orf49
PANTHERiPTHR34252 PTHR34252, 1 hit

Sequences (2+)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: Q8BHR8-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MLSPERLALP DYEYLAQRHV LTYMEDAVCQ LLENREDISQ YGIARFFTDY
60 70 80 90 100
FNSVCQGTHI LFREFSFIQA TPHNRASFLR AFWRCFRTVG KNGDLLTMRE
110 120 130 140 150
YHCLLQLLCP DFPLELTQKA ARIVLMDDAM DCLMSFSDFL FAFQIQFYYS
160 170 180 190 200
EFLESVAAIY QDLLSGKNPN TVIVPTSSSG QHRQRPALGD AGMLDGVEAS
210 220 230 240 250
LFYQRLENLC DRHKYSCPPP ALVKEILSNV QRLTFYGFLV ALSKHHGINQ
260 270 280 290 300
ALGALPDKGD LMHDPAMDEE LERLLVQVPG LVNSITATSE ASCLPSRTPP
310 320 330
RVGSPWKPLH RSRKLDAESD GSTEETDESE T
Length:331
Mass (Da):37,550
Last modified:March 1, 2003 - v1
Checksum:iFCAD8FE4AADD1449
GO
Isoform 2 (identifier: Q8BHR8-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     275-319: LVQVPGLVNS...HRSRKLDAES → VVRSRLYRTP...PNPYRWEPRE
     320-331: Missing.

Show »
Length:326
Mass (Da):37,396
Checksum:iCE7FB57BAAA5CCC3
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A2AII6A2AII6_MOUSE
RIKEN cDNA 1110051M20 gene
1110051M20Rik
234Annotation score:

Sequence cautioni

The sequence BAE37736 differs from that shown. Reason: Frameshift at position 282.Curated

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_024002275 – 319LVQVP…LDAES → VVRSRLYRTPQQQRGKEPGA FGFEGRDKLEAPETVPSALA PTPNPYRWEPRE in isoform 2. 1 PublicationAdd BLAST45
Alternative sequenceiVSP_024003320 – 331Missing in isoform 2. 1 PublicationAdd BLAST12

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK045977 mRNA Translation: BAC32558.1
AK164320 mRNA Translation: BAE37736.1 Frameshift.
AL732478 Genomic DNA No translation available.
BC085239 mRNA Translation: AAH85239.1
BC089006 mRNA Translation: AAH89006.1
CCDSiCCDS16431.1 [Q8BHR8-1]
CCDS79823.1 [Q8BHR8-2]
RefSeqiNP_001298073.1, NM_001311144.1 [Q8BHR8-2]
NP_780332.1, NM_175123.4 [Q8BHR8-1]
UniGeneiMm.386861

Genome annotation databases

EnsembliENSMUST00000064652; ENSMUSP00000067770; ENSMUSG00000040591 [Q8BHR8-2]
ENSMUST00000102594; ENSMUSP00000099654; ENSMUSG00000040591 [Q8BHR8-1]
GeneIDi228356
KEGGimmu:228356
UCSCiuc008kvs.1 mouse [Q8BHR8-2]
uc008kvt.1 mouse [Q8BHR8-1]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK045977 mRNA Translation: BAC32558.1
AK164320 mRNA Translation: BAE37736.1 Frameshift.
AL732478 Genomic DNA No translation available.
BC085239 mRNA Translation: AAH85239.1
BC089006 mRNA Translation: AAH89006.1
CCDSiCCDS16431.1 [Q8BHR8-1]
CCDS79823.1 [Q8BHR8-2]
RefSeqiNP_001298073.1, NM_001311144.1 [Q8BHR8-2]
NP_780332.1, NM_175123.4 [Q8BHR8-1]
UniGeneiMm.386861

3D structure databases

ProteinModelPortaliQ8BHR8
SMRiQ8BHR8
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000099654

PTM databases

iPTMnetiQ8BHR8
PhosphoSitePlusiQ8BHR8

Proteomic databases

PaxDbiQ8BHR8
PRIDEiQ8BHR8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000064652; ENSMUSP00000067770; ENSMUSG00000040591 [Q8BHR8-2]
ENSMUST00000102594; ENSMUSP00000099654; ENSMUSG00000040591 [Q8BHR8-1]
GeneIDi228356
KEGGimmu:228356
UCSCiuc008kvs.1 mouse [Q8BHR8-2]
uc008kvt.1 mouse [Q8BHR8-1]

Organism-specific databases

MGIiMGI:1915079 1110051M20Rik

Phylogenomic databases

eggNOGiENOG410IIYX Eukaryota
ENOG4110Y2Q LUCA
GeneTreeiENSGT00390000012935
HOGENOMiHOG000231517
HOVERGENiHBG056002
InParanoidiQ8BHR8
OMAiHVLFREF
OrthoDBiEOG091G0AWI
PhylomeDBiQ8BHR8
TreeFamiTF329168

Miscellaneous databases

PROiPR:Q8BHR8

Gene expression databases

BgeeiENSMUSG00000040591 Expressed in 266 organ(s), highest expression level in CA1 field of hippocampus
CleanExiMM_1110051M20RIK
ExpressionAtlasiQ8BHR8 baseline and differential
GenevisibleiQ8BHR8 MM

Family and domain databases

InterProiView protein in InterPro
IPR038968 C11orf49
PANTHERiPTHR34252 PTHR34252, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiCK049_MOUSE
AccessioniPrimary (citable) accession number: Q8BHR8
Secondary accession number(s): Q3TPK0, Q5HZI4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: March 1, 2003
Last modified: September 12, 2018
This is version 111 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
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Main funding by: National Institutes of Health

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