UniProtKB - Q88528 (Q88528_9ALPH)
Protein
Submitted name:
Major capsid protein
Gene
UL19h
Organism
Gallid alphaherpesvirus 2
Status
Names & Taxonomyi
Protein namesi | Submitted name: Major capsid proteinImported |
Gene namesi | Name:UL19hImported |
Organismi | Gallid alphaherpesvirus 2Imported |
Taxonomic identifieri | 10390 [NCBI] |
Taxonomic lineagei | Viruses › Duplodnaviria › Heunggongvirae › Peploviricota › Herviviricetes › Herpesvirales › Herpesviridae › Alphaherpesvirinae › Mardivirus |
Subcellular locationi
GO - Cellular componenti
- T=16 icosahedral viral capsid Source: UniProtKB-KW
Keywords - Cellular componenti
Capsid protein, T=16 icosahedral capsid proteinARBA annotation, VirionFamily & Domainsi
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 723 – 743 | Sequence analysisAdd BLAST | 21 |
Keywords - Domaini
Coiled coilSequence analysisFamily and domain databases
InterProi | View protein in InterPro IPR000912, Herpes_MCP IPR023233, Herpes_MCP_upper_sf |
Pfami | View protein in Pfam PF03122, Herpes_MCP, 1 hit |
PRINTSi | PR00235, HSVCAPSIDMCP |
SUPFAMi | SSF103417, SSF103417, 1 hit |
i Sequence
Sequence statusi: Complete.
Q88528-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MKFVFCLNVS HRTNSIGDYG MPISPARDCP PTGVVCFSPL FNIGSTLAPT
60 70 80 90 100
GRLLTTIEMS SHRCMFDYFK QFSSDDDGRY TAQFDILLGT YCNTLSLIRF
110 120 130 140 150
LETGLSVACI CNGGAPDLMY MREGTVQFEI QQPMIAREGP HPADQPVHNY
160 170 180 190 200
MVKRVCRRSL NAAFVVAAEA LALLSEVSLD GTAISKHLRM RAIQQLARNV
210 220 230 240 250
RRSLTPSNGG TVDQMLRILL EKAPPRTLLI PLSHALSEGR TNSQVMRANL
260 270 280 290 300
VSELKRRVCV ETFIMSKPDK PRKYPVVYRT NGKLYPTDNL YAETNPCRFK
310 320 330 340 350
GQTSRRCVGD HRNGEAKTII RNSKVSDTSA RVPVTYGEMI ISGTNLVTVV
360 370 380 390 400
VMGKAVRNMD DVARYILNLR EDEVMNGTDK VIEGDSDRLQ MADVPAELVV
410 420 430 440 450
VGDKLIFLEA LERRVYQATQ VRYPLIGYVD LTFIIPLGIY QRISERYARH
460 470 480 490 500
AGDYAAGVGS GGDIRNFAPR DIYFYNKDNQ LICLTLADAI GTVCHPSFLD
510 520 530 540 550
IEATVNHLRS GRYELTCTLG AYVTNPPALP LMDRARQFFE NVGEMMREFP
560 570 580 590 600
RWVEECQMTT EQFMSTGNEN LFMELHPAFD FFVIPGDVDL PGPHNIPQVM
610 620 630 640 650
ASAEASWRVC NGNIPLPLCN TDFRDALGRE LSSTRYKLSD STVSALSDTF
660 670 680 690 700
ADSSYPTAFY IIEAVIHGSE RNFGLLMRLV IQCIRSYWDN SKRVAFINNF
710 720 730 740 750
HMVAYIEAYL CSGELPEECM NIYKELMRHV RALRSLVQDY TEQTDSLYEQ
760 770 780 790 800
SHDELNHVSI DRTVLPPLLW DCDPLIYRTR GIRDRELYLK RRWGRKLHRP
810 820 830 840 850
PLAGIARCRL QSHQANVLVH NRPVRDIDRQ AFVPHHSQEW TILSKIYYYV
860 870 880 890 900
VVPAFSRGQC CTMGIRFDNI YATSQAVIIP EVHSDEEPPI DPEDPRHPLN
910 920 930 940 950
GRNLIPNTFN VLLHNARISA DADALLTLQE TVNNMAERTT AILYATTPDI
960 970 980 990 1000
GGASASTRRM RTFDGALHMA FLVWLIRATT RRSWREHIFI PCTTSMLSSH
1010 1020 1030 1040 1050
ALIIWRQSVR PLPGNIRTIC ERAPPVPSFL GANYYSTFRQ PLAQYVKRSR
1060 1070 1080 1090 1100
CGPNEMSYAL MSGYFKLSPL GLYHQLRTGL HPGIAFTVIR QDRFLADMGL
1110 1120 1130 1140 1150
FAERASESYF LGQVSVTKRP HAGGVQFSLT QPRANVDLGV GYTAVCTPLM
1160 1170 1180 1190 1200
LRNAVTDMGN TAQSLHLTRG SPPLLNPEAD EFLRKVATRG QRTAPQRPVP
1210 1220 1230 1240 1250
FLGTLMPSLP SGLEHGQMSI CEFIPTPVSS DLEYFKTPCN PRGRAAGPIH
1260 1270 1280 1290 1300
SGEDMQDVDN IMYDHKQGDP AYPFRATNNP WASQRYSYAD RLYNGTYNLS
1310 1320 1330 1340 1350
GASPLFSPSY KFFTPAEVCS KTRCLDKLIT EAGSAPSAST SDGEIQFKRP
1360 1370 1380 1390 1400
VGSTELTEDP CSLFQEAYPI LCATDKALLL SYTKGTTDGS ESHLAQYLIR
1410
DSSPIGGCLP TC
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | Z54369 Genomic DNA Translation: CAA91200.1 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | Z54369 Genomic DNA Translation: CAA91200.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family and domain databases
InterProi | View protein in InterPro IPR000912, Herpes_MCP IPR023233, Herpes_MCP_upper_sf |
Pfami | View protein in Pfam PF03122, Herpes_MCP, 1 hit |
PRINTSi | PR00235, HSVCAPSIDMCP |
SUPFAMi | SSF103417, SSF103417, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | Q88528_9ALPH | |
Accessioni | Q88528Primary (citable) accession number: Q88528 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 1, 1996 |
Last sequence update: | November 1, 1996 | |
Last modified: | October 7, 2020 | |
This is version 45 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |