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Protein

UPF0307 protein PSPTO_4464

Gene

PSPTO_4464

Organism
Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciPSYR223283:G1G0D-4531-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0307 protein PSPTO_4464UniRule annotation
Gene namesi
Ordered Locus Names:PSPTO_4464
OrganismiPseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
Taxonomic identifieri223283 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002515 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002082251 – 173UPF0307 protein PSPTO_4464Add BLAST173

Interactioni

Protein-protein interaction databases

STRINGi223283.PSPTO_4464

Structurei

Secondary structure

1173
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi23 – 32Combined sources10
Helixi37 – 40Combined sources4
Helixi47 – 55Combined sources9
Helixi56 – 58Combined sources3
Helixi62 – 75Combined sources14
Helixi76 – 78Combined sources3
Helixi81 – 114Combined sources34
Helixi117 – 126Combined sources10
Helixi132 – 147Combined sources16
Helixi153 – 166Combined sources14

3D structure databases

ProteinModelPortaliQ87WS9
SMRiQ87WS9
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ87WS9

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0307 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105N42 Bacteria
COG3028 LUCA
HOGENOMiHOG000013875
KOiK09889
OMAiKRRQMQF
OrthoDBiPOG091H05SG
PhylomeDBiQ87WS9

Family and domain databases

CDDicd16331 YjgA-like, 1 hit
HAMAPiMF_00765 UPF0307, 1 hit
InterProiView protein in InterPro
IPR023153 PSPTO4464-like_dom_sf
IPR006839 Ribosome-assoc_YjgA
PANTHERiPTHR38101 PTHR38101, 1 hit
PfamiView protein in Pfam
PF04751 DUF615, 1 hit
PIRSFiPIRSF016183 UCP016183, 1 hit
SUPFAMiSSF158710 SSF158710, 1 hit

Sequencei

Sequence statusi: Complete.

Q87WS9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVDSYDDSLD GEKSKTQVKR ELHALVDLGE RLTTLKADVL AKLPLTDALR
60 70 80 90 100
KALAEAPKHT ANIARKRHIL FIGKLMRDQD QEAILVLLDQ LDASTRQYNE
110 120 130 140 150
RFHNLERWRD RLIAGDDADL EKFVIEYPDA DRQQLRSLIR QAQHEVARNK
160 170
PPATSRKIFK YIRELDELQR GLR
Length:173
Mass (Da):20,137
Last modified:June 1, 2003 - v1
Checksum:i00D6C30B5191A951
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016853 Genomic DNA Translation: AAO57913.1
RefSeqiNP_794218.1, NC_004578.1
WP_003377535.1, NC_004578.1

Genome annotation databases

EnsemblBacteriaiAAO57913; AAO57913; PSPTO_4464
GeneIDi1186145
KEGGipst:PSPTO_4464
PATRICifig|223283.9.peg.4579

Similar proteinsi

Entry informationi

Entry nameiY4464_PSESM
AccessioniPrimary (citable) accession number: Q87WS9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: June 1, 2003
Last modified: February 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

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