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Protein

Vitamin B12 import system permease protein BtuC

Gene

btuC

Organism
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport

Names & Taxonomyi

Protein namesi
Recommended name:
Vitamin B12 import system permease protein BtuCUniRule annotation
Gene namesi
Name:btuCUniRule annotation
Ordered Locus Names:VP1311
OrganismiVibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Taxonomic identifieri223926 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000002493 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 42HelicalUniRule annotationAdd BLAST23
Transmembranei62 – 84HelicalUniRule annotationAdd BLAST23
Transmembranei91 – 113HelicalUniRule annotationAdd BLAST23
Transmembranei118 – 140HelicalUniRule annotationAdd BLAST23
Transmembranei147 – 169HelicalUniRule annotationAdd BLAST23
Transmembranei189 – 208HelicalUniRule annotationAdd BLAST20
Transmembranei240 – 262HelicalUniRule annotationAdd BLAST23
Transmembranei277 – 299HelicalUniRule annotationAdd BLAST23
Transmembranei306 – 325HelicalUniRule annotationAdd BLAST20

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000599801 – 331Vitamin B12 import system permease protein BtuCAdd BLAST331

Interactioni

Subunit structurei

The complex is composed of two ATP-binding proteins (BtuD), two transmembrane proteins (BtuC) and a solute-binding protein (BtuF).UniRule annotation

Protein-protein interaction databases

STRINGi223926.VP1311

Structurei

3D structure databases

ProteinModelPortaliQ87Q39
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108IU2 Bacteria
COG4139 LUCA
HOGENOMiHOG000045407
KOiK06073
OMAiQLFVWQL

Family and domain databases

Gene3Di1.10.3470.10, 1 hit
HAMAPiMF_01004 BtuC, 1 hit
InterProiView protein in InterPro
IPR037294 ABC_BtuC-like
IPR023691 ABC_transptr_BtuC
IPR000522 ABC_transptr_permease_BtuC
PANTHERiPTHR30472 PTHR30472, 1 hit
PfamiView protein in Pfam
PF01032 FecCD, 1 hit
SUPFAMiSSF81345 SSF81345, 1 hit

Sequencei

Sequence statusi: Complete.

Q87Q39-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDFQQLILNK ERRWQRNLVI MSVVLVLLST IHLMVGEVFL SPFQSLSVFE
60 70 80 90 100
QKLLLDLRLP RLVAAAMIGA ALAVSGATLQ VLLGNVLAEP GVLGISGGAS
110 120 130 140 150
LAMVLVMFAL PVLPTPMIFM LAAIAGSMLF TLILVGIARA MHLTTARLLL
160 170 180 190 200
VGVALGILSS AIVTWAFYFS DDLSLRQLMY WLMGSIGGAS WYQHTVTLVM
210 220 230 240 250
LPVLVWLCCQ GKPLDKLMLG EIHATQLGVD VHQMRWKLIL AISVLVGCSV
260 270 280 290 300
ALGGIISFVG LVVPHLLRLA FGTENRYLLP LSAIFGAALL VFADIGARLL
310 320 330
LDSAELPLGV MTTSIGAPIF IWMLVKSHDA R
Length:331
Mass (Da):35,749
Last modified:February 15, 2005 - v2
Checksum:i13D4A4DBCD5A5E1A
GO

Sequence cautioni

The sequence BAC59574 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA Translation: BAC59574.1 Different initiation.
RefSeqiNP_797690.1, NC_004603.1

Genome annotation databases

EnsemblBacteriaiBAC59574; BAC59574; BAC59574
GeneIDi1188816
KEGGivpa:VP1311
PATRICifig|223926.6.peg.1253

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000031 Genomic DNA Translation: BAC59574.1 Different initiation.
RefSeqiNP_797690.1, NC_004603.1

3D structure databases

ProteinModelPortaliQ87Q39
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi223926.VP1311

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAC59574; BAC59574; BAC59574
GeneIDi1188816
KEGGivpa:VP1311
PATRICifig|223926.6.peg.1253

Phylogenomic databases

eggNOGiENOG4108IU2 Bacteria
COG4139 LUCA
HOGENOMiHOG000045407
KOiK06073
OMAiQLFVWQL

Family and domain databases

Gene3Di1.10.3470.10, 1 hit
HAMAPiMF_01004 BtuC, 1 hit
InterProiView protein in InterPro
IPR037294 ABC_BtuC-like
IPR023691 ABC_transptr_BtuC
IPR000522 ABC_transptr_permease_BtuC
PANTHERiPTHR30472 PTHR30472, 1 hit
PfamiView protein in Pfam
PF01032 FecCD, 1 hit
SUPFAMiSSF81345 SSF81345, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiBTUC_VIBPA
AccessioniPrimary (citable) accession number: Q87Q39
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 15, 2005
Last sequence update: February 15, 2005
Last modified: October 10, 2018
This is version 85 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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