Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

SCAR-like protein 1

Gene

Os03g0816900

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionActin-binding

Names & Taxonomyi

Protein namesi
Recommended name:
SCAR-like protein 1
Gene namesi
Ordered Locus Names:Os03g0816900, Os03g0817000, LOC_Os03g60240
ORF Names:OSJNBa0094J08.20
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001890091 – 2097SCAR-like protein 1Add BLAST2097

Proteomic databases

PaxDbiQ84TX2
PRIDEiQ84TX2

Expressioni

Gene expression databases

ExpressionAtlasiQ84TX2 differential
GenevisibleiQ84TX2 OS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi39947.LOC_Os03g60240.1

Structurei

3D structure databases

SMRiQ84TX2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2028 – 2046WH2PROSITE-ProRule annotationAdd BLAST19

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi505 – 509Poly-Ser5
Compositional biasi711 – 714Poly-Asp4
Compositional biasi1598 – 1622Pro-richAdd BLAST25

Sequence similaritiesi

Belongs to the SCAR/WAVE family.Curated

Phylogenomic databases

eggNOGiENOG410IJAE Eukaryota
ENOG4111H25 LUCA
HOGENOMiHOG000083503
InParanoidiQ84TX2

Family and domain databases

InterProiView protein in InterPro
IPR028288 SCAR/WAVE_fam
IPR003124 WH2_dom
PANTHERiPTHR12902 PTHR12902, 1 hit
PROSITEiView protein in PROSITE
PS51082 WH2, 1 hit

Sequencei

Sequence statusi: Complete.

Q84TX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRYQIRNEY GLSDPELYAP GEKDDPEALL EGVAMAGLVG VLRQLGDLAE
60 70 80 90 100
FAAEIFHDLH EDVMATASRG HGLMLRLRQL EAEFPAVEKA IISQSDHSNY
110 120 130 140 150
PHDDGVEWHT NLQIDQNMIT QGDMPRFILD SYEECRGPPR LFTLDKFDVA
160 170 180 190 200
GAGASLKRYS DPSFFKTEHS SDMIETDAVI EKKPRKIKKK ALRWRKGETL
210 220 230 240 250
ESLLIANSES HTTSKDRSSR KVPPRTTKLK YRYPRESDHK NISRICREHL
260 270 280 290 300
QEIISSQQKI FSNYSSRYYH PKFRLTESSE TASSFGEIDN FSARAQSSAK
310 320 330 340 350
LELTKVVPIN EFDTKGIAPT HINGSDCLEA LEADDRQLQA TQHEPDKVED
360 370 380 390 400
VCKRSLVEQN AMLSNSDRMQ SVQEENLLSA MVPADQNDDR CRPDDTGSDQ
410 420 430 440 450
ENFVDALNNM ESEGEAHAEM KIKKDPGAKM ELDELNFHRD EGENERHTEF
460 470 480 490 500
SELGHVIDSS PWLNDSYNGG EPNHAISSNT NFSGVDCTND EEPSNDVDLM
510 520 530 540 550
EMDVSSSSSV FSDDNDVFRT NGNMNGFQQY QEASLSNDHH AVIAHSSDKQ
560 570 580 590 600
SSQKSSGLDG SSIESNDFIE KPFHSLEDDK NFAPDGTSVI LGRPNDVSQC
610 620 630 640 650
EEEIEVGNAD DSLLQPTISN QEVHRSNNQL EGVAMHASIS SGKVASFPDM
660 670 680 690 700
DPGMCTKDLE LDNVLVPKET VANTPPTGLG TDHIHEHVDE LDSGVAPINS
710 720 730 740 750
SIQSDSTYES DDDDMAEDLN SLPEDDLYKH DVEDLYKHVL EDDGIIALGK
760 770 780 790 800
GPCSTRANMH QEDPMEVSDV RGDFSNGQEL PVLTETASPQ GELVGGGELP
810 820 830 840 850
LLTETASPQG GEEDLADEVV VISSRDLNDE KKPSLAEVPL ACGDASLLDS
860 870 880 890 900
SASCLEHDES TETGEIAKSD EVLVNVEVAE ESITGRFTDD MTPFQEDLPD
910 920 930 940 950
GAKYSEDAEF LANPRVDNSR HDVQLQSSSP CREELETVKA PCENLCALDE
960 970 980 990 1000
SREHIFEKSV LQINNLPQHI ETKNTGEACS DIDDIQHLSA LHCPKNPVCQ
1010 1020 1030 1040 1050
EELPDETNLS ADVQYHCDVE KGGAVILNSK MVEEQPENID LVREPRAQDS
1060 1070 1080 1090 1100
FGTNPFMDPG YKANHALADP CPSYQPCFSE EEQDFISELL IPHGNMGIED
1110 1120 1130 1140 1150
LNPVPVADSL WEPATPPDEV PLPSEVMTEE DFRSFCHEYH EMDLTATPES
1160 1170 1180 1190 1200
IDDKPASDSN VVSSSLVTSE SEFLYCVSAV RTGVDQEESR DAPDDTLMHF
1210 1220 1230 1240 1250
SAKADPDDKA ANSDLKSDEP FIDEKIHELG VPSVPMELEV EQHALHEVDS
1260 1270 1280 1290 1300
HGDSQLLDND MIDETCSSPS GNSIAVKDKQ ETCANLVSRA FINERTDELE
1310 1320 1330 1340 1350
VPVSNSVLLE PSEEVHDSDE YNYQDVPWSS TDEGRDEVDA HPLSKRIQTQ
1360 1370 1380 1390 1400
GSEALVLGEL DSRAVPSCSV NEMADHVDAP PLSTVLEAEQ EPEDCISGEH
1410 1420 1430 1440 1450
NSQVTKSSLV DEKIGELDDA SPLSNTLLAE MEREVCVPGK SASQIASCSP
1460 1470 1480 1490 1500
TPSNEKIDEL NAPPLSSSGL IELESEDSVS GDLDSQIIPC SSPNDKTNEP
1510 1520 1530 1540 1550
DGATSTHVLP VELEQEVCSF PELDSLVAPC SLNDDKVCEL DEPPCKQLES
1560 1570 1580 1590 1600
ENGSYCLPQV DCQIEPCYSE SVVLSEASTM SSANAMPSTE ETYRLSSPVP
1610 1620 1630 1640 1650
PPNEPFSNVS YEDPQKPPPL PPLLWRLGKP RLGIASTKGH MLEPERGKGP
1660 1670 1680 1690 1700
VLHTSDAGMD NMPGCLSGMT ESIEPVSSQE IKERHLDPIL DNNERGVEFR
1710 1720 1730 1740 1750
RLATPPTAND VAVTEHVQLF SDACENIKHQ ERVSSSETEA EEHQNGTGIT
1760 1770 1780 1790 1800
DVMDSHPPKP LFLVPSISQQ GLQGSVFPSD TSDNGEHSSY TSRAVSEDEK
1810 1820 1830 1840 1850
TVDDHNAACA MDLHITSSSA SSHVSENGCN QQSHGESLPV TSVDKVHTSD
1860 1870 1880 1890 1900
ASCEDNKLKN HFITSEVCSD ATNLSASGLL TEEENIHNVE DQYEGPLPSE
1910 1920 1930 1940 1950
ESSGCLDYPH DDHNSEKEDI HQPDGYAASP GNNNHFDSSH EGGYLHAEQP
1960 1970 1980 1990 2000
PVMGWTVRPQ MLHPNYGISM EENQFEPKVE DHLLIKKPVS IRNIPRNPLV
2010 2020 2030 2040 2050
DAVAAHDRST MRKVSELVAP TDKSKPNERN LLLEQIRNKT FNLKPVSSAK
2060 2070 2080 2090
QPTIRTPPRA STRNLKVAAI IEKANAIRQA VGSDDEDGDN WSESSDT
Length:2,097
Mass (Da):230,573
Last modified:December 6, 2005 - v2
Checksum:i1936DCEC24C6F007
GO

Sequence cautioni

The sequence AAO60018 differs from that shown. Reason: Erroneous gene model prediction.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti1084D → Y in AK066412 (PubMed:12869764).Curated1
Sequence conflicti2060A → V in AK104998 (PubMed:12869764).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC133007 Genomic DNA Translation: AAO60018.1 Sequence problems.
AP014959 Genomic DNA No translation available.
AK066412 mRNA No translation available.
AK104998 mRNA No translation available.
RefSeqiXP_015631167.1, XM_015775681.1
UniGeneiOs.14389
Os.52328

Genome annotation databases

EnsemblPlantsiOs03t0816900-01; Os03t0816900-01; Os03g0816900
Os03t0817000-01; Os03t0817000-01; Os03g0817000
GeneIDi4334569
GrameneiOs03t0816900-01; Os03t0816900-01; Os03g0816900
Os03t0817000-01; Os03t0817000-01; Os03g0817000
KEGGiosa:4334569

Similar proteinsi

Entry informationi

Entry nameiSCRL1_ORYSJ
AccessioniPrimary (citable) accession number: Q84TX2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: May 23, 2018
This is version 63 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health