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UniProtKB - Q84JQ8 (DOF18_ARATH)
Protein
Dof zinc finger protein DOF1.8
Gene
DOF1.8
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence.
By similaritySites
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Metal bindingi | 51 | ZincPROSITE-ProRule annotation | 1 | |
Metal bindingi | 54 | ZincPROSITE-ProRule annotation | 1 | |
Metal bindingi | 76 | ZincPROSITE-ProRule annotation | 1 | |
Metal bindingi | 79 | ZincPROSITE-ProRule annotation | 1 |
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 49 – 103 | Dof-typePROSITE-ProRule annotationAdd BLAST | 55 |
GO - Molecular functioni
- DNA-binding transcription factor activity Source: TAIR
- metal ion binding Source: UniProtKB-KW
- transcription cis-regulatory region binding Source: TAIR
GO - Biological processi
- regulation of transcription, DNA-templated Source: TAIR
Keywordsi
Molecular function | DNA-binding |
Biological process | Transcription, Transcription regulation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Recommended name: Dof zinc finger protein DOF1.8Short name: AtDOF1.8 |
Gene namesi | Name:DOF1.8 Ordered Locus Names:At1g64620 ORF Names:F1N19.19 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT1G64620 |
TAIRi | locus:2019499, AT1G64620 |
Subcellular locationi
Nucleus
- Nucleus Curated
Nucleus
- nucleus Source: UniProtKB-SubCell
Keywords - Cellular componenti
NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000074270 | 1 – 352 | Dof zinc finger protein DOF1.8Add BLAST | 352 |
Proteomic databases
PaxDbi | Q84JQ8 |
PRIDEi | Q84JQ8 |
ProteomicsDBi | 222106 |
PTM databases
iPTMneti | Q84JQ8 |
Expressioni
Gene expression databases
ExpressionAtlasi | Q84JQ8, baseline and differential |
Genevisiblei | Q84JQ8, AT |
Interactioni
Protein-protein interaction databases
BioGRIDi | 27991, 7 interactors |
IntActi | Q84JQ8, 1 interactor |
STRINGi | 3702.AT1G64620.1 |
Structurei
3D structure databases
AlphaFoldDBi | Q84JQ8 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 24 – 46 | DisorderedSequence analysisAdd BLAST | 23 | |
Regioni | 93 – 136 | DisorderedSequence analysisAdd BLAST | 44 | |
Regioni | 265 – 334 | DisorderedSequence analysisAdd BLAST | 70 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 100 – 127 | Polar residuesSequence analysisAdd BLAST | 28 | |
Compositional biasi | 292 – 309 | Polar residuesSequence analysisAdd BLAST | 18 | |
Compositional biasi | 310 – 328 | Basic and acidic residuesSequence analysisAdd BLAST | 19 |
Zinc finger
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Zinc fingeri | 49 – 103 | Dof-typePROSITE-ProRule annotationAdd BLAST | 55 |
Keywords - Domaini
Zinc-fingerPhylogenomic databases
eggNOGi | ENOG502QPN9, Eukaryota |
HOGENOMi | CLU_036438_5_1_1 |
InParanoidi | Q84JQ8 |
OMAi | YPNVHDS |
OrthoDBi | 1101510at2759 |
PhylomeDBi | Q84JQ8 |
Family and domain databases
InterProi | View protein in InterPro IPR045174, Dof IPR003851, Znf_Dof |
PANTHERi | PTHR31992, PTHR31992, 1 hit |
Pfami | View protein in Pfam PF02701, zf-Dof, 1 hit |
PROSITEi | View protein in PROSITE PS01361, ZF_DOF_1, 1 hit PS50884, ZF_DOF_2, 1 hit |
i Sequence
Sequence statusi: Complete.
Q84JQ8-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDTAKWPQEF VVKPMNEIVT NTCLKQQSNP PSPATPVERK ARPEKDQALN
60 70 80 90 100
CPRCNSLNTK FCYYNNYSLT QPRYFCKDCR RYWTAGGSLR NIPVGGGVRK
110 120 130 140 150
NKRSSSNSSS SSPSSSSSSK KPLFANNNTP TPPLPHLNPK IGEAAATKVQ
160 170 180 190 200
DLTFSQGFGN AHEVKDLNLA FSQGFGIGHN HHSSIPEFLQ VVPSSSMKNN
210 220 230 240 250
PLVSTSSSLE LLGISSSSAS SNSRPAFMSY PNVHDSSVYT ASGFGLSYPQ
260 270 280 290 300
FQEFMRPALG FSLDGGDPLR QEEGSSGTNN GRPLLPFESL LKLPVSSSST
310 320 330 340 350
NSGGNGNLKE NNDEHSDHEH EKEEGEADQS VGFWSGMLSA GASAAASGGS
WQ
Sequence cautioni
The sequence AAF19678 differs from that shown. Reason: Erroneous gene model prediction.Curated
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Sequence conflicti | 180 | N → H in AAM61461 (Ref. 4) Curated | 1 | |
Sequence conflicti | 208 | S → A in AAM61461 (Ref. 4) Curated | 1 | |
Sequence conflicti | 311 | N → I in AAM61461 (Ref. 4) Curated | 1 | |
Sequence conflicti | 315 | H → R in AAM61461 (Ref. 4) Curated | 1 | |
Sequence conflicti | 349 | G → GG in AAM61461 (Ref. 4) Curated | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC009519 Genomic DNA Translation: AAF19678.1 Sequence problems. CP002684 Genomic DNA Translation: AEE34262.1 BT004047 mRNA Translation: AAO42079.1 BT005148 mRNA Translation: AAO50681.1 AY084898 mRNA Translation: AAM61461.1 |
PIRi | E96669 |
RefSeqi | NP_564836.1, NM_105137.3 |
Genome annotation databases
EnsemblPlantsi | AT1G64620.1; AT1G64620.1; AT1G64620 |
GeneIDi | 842770 |
Gramenei | AT1G64620.1; AT1G64620.1; AT1G64620 |
KEGGi | ath:AT1G64620 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC009519 Genomic DNA Translation: AAF19678.1 Sequence problems. CP002684 Genomic DNA Translation: AEE34262.1 BT004047 mRNA Translation: AAO42079.1 BT005148 mRNA Translation: AAO50681.1 AY084898 mRNA Translation: AAM61461.1 |
PIRi | E96669 |
RefSeqi | NP_564836.1, NM_105137.3 |
3D structure databases
AlphaFoldDBi | Q84JQ8 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
BioGRIDi | 27991, 7 interactors |
IntActi | Q84JQ8, 1 interactor |
STRINGi | 3702.AT1G64620.1 |
PTM databases
iPTMneti | Q84JQ8 |
Proteomic databases
PaxDbi | Q84JQ8 |
PRIDEi | Q84JQ8 |
ProteomicsDBi | 222106 |
Genome annotation databases
EnsemblPlantsi | AT1G64620.1; AT1G64620.1; AT1G64620 |
GeneIDi | 842770 |
Gramenei | AT1G64620.1; AT1G64620.1; AT1G64620 |
KEGGi | ath:AT1G64620 |
Organism-specific databases
Araporti | AT1G64620 |
TAIRi | locus:2019499, AT1G64620 |
Phylogenomic databases
eggNOGi | ENOG502QPN9, Eukaryota |
HOGENOMi | CLU_036438_5_1_1 |
InParanoidi | Q84JQ8 |
OMAi | YPNVHDS |
OrthoDBi | 1101510at2759 |
PhylomeDBi | Q84JQ8 |
Miscellaneous databases
PROi | PR:Q84JQ8 |
Gene expression databases
ExpressionAtlasi | Q84JQ8, baseline and differential |
Genevisiblei | Q84JQ8, AT |
Family and domain databases
InterProi | View protein in InterPro IPR045174, Dof IPR003851, Znf_Dof |
PANTHERi | PTHR31992, PTHR31992, 1 hit |
Pfami | View protein in Pfam PF02701, zf-Dof, 1 hit |
PROSITEi | View protein in PROSITE PS01361, ZF_DOF_1, 1 hit PS50884, ZF_DOF_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | DOF18_ARATH | |
Accessioni | Q84JQ8Primary (citable) accession number: Q84JQ8 Secondary accession number(s): Q8LFE3, Q9SGV3 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | November 9, 2004 |
Last sequence update: | June 1, 2003 | |
Last modified: | May 25, 2022 | |
This is version 108 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names