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Entry version 74 (18 Sep 2019)
Sequence version 1 (01 Jun 2003)
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Protein
Submitted name:

Conjugal transfer ATP-binding protein TraC

Gene

traC

Organism
Escherichia coli
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandATP-bindingImported, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Conjugal transfer ATP-binding protein TraCImported
Submitted name:
F pilus assembly protein TraCImported
Submitted name:
IncF plasmid conjugative transfer pilus assembly protein TraCImported
Submitted name:
TraCImported
Submitted name:
Type-IV secretion system protein TraCImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:traCImported
ORF Names:AM464_29005Imported, C4M78_25335Imported, D2185_20995Imported, ECTO6_04820Imported, EIA21_25415Imported, EQ825_22010Imported, EWK56_24005Imported, EXX13_22045Imported, RCS96_PII0018Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates if the gene coding for the protein originates from the hydrogenosome, the mitochondrion, the nucleomorph, different plastids or a plasmid. The absence of this section means that the gene is located in one of the main chromosomal element(s).<p><a href='/help/encoded_on' target='_top'>More...</a></p>Encoded oniPlasmid 2Imported
Plasmid RCS96_pIIImported
Plasmid p1658/97Imported
Plasmid pDM0133Imported
Plasmid pH2291-144Imported
Plasmid pH2332-166Imported
Plasmid unnamed3Imported
Plasmid unnamed7Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiEscherichia coliImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri562 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000269620 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000239043 Componenti: Unassembled WGS sequence
  • UP000291778 Componenti: Unassembled WGS sequence
  • UP000247477 Componenti: Plasmid unnamed3
  • UP000294000 Componenti: Unassembled WGS sequence
  • UP000290592 Componenti: Unassembled WGS sequence
  • UP000284122 Componenti: Unassembled WGS sequence
  • UP000294295 Componenti: Plasmid 2

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini482 – 669DUF87InterPro annotationAdd BLAST188

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
182908at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR002789 HerA_central
IPR027417 P-loop_NTPase
IPR014117 TraC-F-type
IPR025955 TraC/Conjuga_ATPase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01935 DUF87, 1 hit
PF11130 TraC_F_IV, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540 SSF52540, 1 hit

TIGRFAMs; a protein family database

More...
TIGRFAMsi
TIGR02746 TraC-F-type, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q84A30-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNNPLEAVTQ AVNSLVTALK LPDESAKANE VLGEMSFPQF SRLLPYRDYN
60 70 80 90 100
QESGLFMNDT TMGFMLEAIP INGANESIVE ALDHMLRTKL PRGIPLCIHL
110 120 130 140 150
MSSQLVGDRI EYGLREFSWS GEQAERFNAI TRAYYMKAAA TQFPLPEGMN
160 170 180 190 200
LPLTLRHYRV FISYCSPSKK KSRADILEME NLVKIIRASL QGASITTQTV
210 220 230 240 250
DAQAFIDIVG EMINHNPDSL YPKRRQLDPY SDLNYQCVED SFDLKVRADY
260 270 280 290 300
LTLGLRENGR NSTARILNFH LARNPEIAFL WNVADNYSNL LNPELSISCP
310 320 330 340 350
FILTLTLVVE DQVKTHSEAN LKYMDLEKKS KTSYAKWFPS VEKEAKEWGE
360 370 380 390 400
LRQRLGSGQS SVVSYFLNIT AFCKDNNETA LEVEQDILNS FRKNGFELIS
410 420 430 440 450
PRFNHMRNFL TCLPFMAGKG LFKQLKEAGV VQRAESFNVA NLMPLVADNP
460 470 480 490 500
LTPAGLLAPT YRNQLAFIDI FFRGMNNTNY NMAVCGTSGA GKTGLIQPLI
510 520 530 540 550
RSVLDSGGFA VVFDMGDGYK SLCENMGGVY LDGETLRFNP FANITDIDQS
560 570 580 590 600
AERVRDQLSV MASPNGNLDE VHEGLLLQAV RASWLAKENR ARIDDVVDFL
610 620 630 640 650
KNASDSEQYV ESPTIRSRLD EMIVLLDQYT ANGTYGQYFN SDEPSLRDDA
660 670 680 690 700
KMVVLELGGL EDRPSLLVAV MFSLIIYIEN RMYRTPRNLK KLNVIDEGWR
710 720 730 740 750
LLDFKNHKVG EFIEKGYRTA RRHTGAYITI TQNIVDFDSD KASSAARAAW
760 770 780 790 800
GNSSYKIILK QSAKEFAKYN QLYPDQFLPL QRDMIGKFGA AKDQWFSSFL
810 820 830 840 850
LQVENHSSWH RLFVDPLSRA MYSSDGPDFE FVQQKRKEGL SIHEAVWQLA
860 870
WKKSGPEMAS LEAWLEEHEK YRSVA
Length:875
Mass (Da):99,188
Last modified:June 1, 2003 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5BBEC7CE5E54D561
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AF550679 Genomic DNA Translation: AAO49527.1
KJ170699 Genomic DNA Translation: AHY02906.1
KJ484626 Genomic DNA Translation: AIF77272.1
KJ484628 Genomic DNA Translation: AIF77801.1
CP029744 Genomic DNA Translation: AWS66749.1
PSOV01000025 Genomic DNA Translation: PPE88895.1
QYZJ01000026 Genomic DNA Translation: RJF12336.1
RQUH01000073 Genomic DNA Translation: RRB81122.1
SCGK01000028 Genomic DNA Translation: RXA48843.1
SERV01000021 Genomic DNA Translation: RYL78129.1
SHJU01000031 Genomic DNA Translation: RZZ94650.1
LT985319 Genomic DNA Translation: SPE04352.1
LS992167 Genomic DNA Translation: SYX23378.1

NCBI Reference Sequences

More...
RefSeqi
NP_862929.1, NC_004998.1
WP_001064247.1, NZ_UIKB01000021.1
YP_009060147.1, NC_024956.1
YP_009068340.1, NC_025139.1
YP_009070605.1, NC_025175.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
1446493
20466899
20491470
20492673
39526584

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|562.7202.peg.3669

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF550679 Genomic DNA Translation: AAO49527.1
KJ170699 Genomic DNA Translation: AHY02906.1
KJ484626 Genomic DNA Translation: AIF77272.1
KJ484628 Genomic DNA Translation: AIF77801.1
CP029744 Genomic DNA Translation: AWS66749.1
PSOV01000025 Genomic DNA Translation: PPE88895.1
QYZJ01000026 Genomic DNA Translation: RJF12336.1
RQUH01000073 Genomic DNA Translation: RRB81122.1
SCGK01000028 Genomic DNA Translation: RXA48843.1
SERV01000021 Genomic DNA Translation: RYL78129.1
SHJU01000031 Genomic DNA Translation: RZZ94650.1
LT985319 Genomic DNA Translation: SPE04352.1
LS992167 Genomic DNA Translation: SYX23378.1
RefSeqiNP_862929.1, NC_004998.1
WP_001064247.1, NZ_UIKB01000021.1
YP_009060147.1, NC_024956.1
YP_009068340.1, NC_025139.1
YP_009070605.1, NC_025175.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi1446493
20466899
20491470
20492673
39526584
PATRICifig|562.7202.peg.3669

Phylogenomic databases

OrthoDBi182908at2

Family and domain databases

InterProiView protein in InterPro
IPR002789 HerA_central
IPR027417 P-loop_NTPase
IPR014117 TraC-F-type
IPR025955 TraC/Conjuga_ATPase
PfamiView protein in Pfam
PF01935 DUF87, 1 hit
PF11130 TraC_F_IV, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR02746 TraC-F-type, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ84A30_ECOLX
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q84A30
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 18, 2019
This is version 74 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported
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Main funding by: National Institutes of Health

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