Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

H1 histone family, member X

Gene

H1fx

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
H1 histone family, member XImported
Gene namesi
Name:H1fxImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:2685307 H1fx

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeUniRule annotationSAAS annotation, NucleusUniRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000044927 Expressed in 33 organ(s), highest expression level in meninx of telencephalon

Interactioni

Protein-protein interaction databases

IntActiQ80ZM5, 1 interactor
STRINGi10090.ENSMUSP00000060761

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini43 – 117H15InterPro annotationAdd BLAST75

Sequence similaritiesi

Belongs to the histone H1/H5 family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG4012 Eukaryota
ENOG4112541 LUCA
GeneTreeiENSGT00730000111536
HOGENOMiHOG000112842
HOVERGENiHBG009035
KOiK11275
OMAiARKVAWF
OrthoDBiEOG091G167M
TreeFamiTF313664

Family and domain databases

CDDicd00073 H15, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005818 Histone_H1/H5_H15
IPR005819 Histone_H5
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00538 Linker_histone, 1 hit
PRINTSiPR00624 HISTONEH5
SMARTiView protein in SMART
SM00526 H15, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51504 H15, 1 hit

Sequencei

Sequence statusi: Complete.

Q80ZM5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSVELEEALP PTSADGTARK TAKAGGSAAP TQPKRRKNRK KNQPGKYSQL
60 70 80 90 100
VVETIRKLGE RGGSSLARIY AEARKVAWFD QQNGRTYLKY SIRALVQNDT
110 120 130 140 150
LLQVKGTGAN GSFKLNRKKL EGGAERRGAS AASSPAPKAR TAAADRTPAR
160 170 180
PQPERRAHKS KKAAAAASAK KVKKAAKPSV PKVPKGRK
Length:188
Mass (Da):20,151
Last modified:June 1, 2003 - v1
Checksum:i8F60E1360F3BC165
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC153872 Genomic DNA No translation available.
BC048709 mRNA Translation: AAH48709.1
RefSeqiNP_941024.1, NM_198622.1
UniGeneiMm.33796

Genome annotation databases

EnsembliENSMUST00000056403; ENSMUSP00000060761; ENSMUSG00000044927
GeneIDi243529
KEGGimmu:243529
UCSCiuc009cum.1 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC153872 Genomic DNA No translation available.
BC048709 mRNA Translation: AAH48709.1
RefSeqiNP_941024.1, NM_198622.1
UniGeneiMm.33796

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ80ZM5, 1 interactor
STRINGi10090.ENSMUSP00000060761

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000056403; ENSMUSP00000060761; ENSMUSG00000044927
GeneIDi243529
KEGGimmu:243529
UCSCiuc009cum.1 mouse

Organism-specific databases

CTDi8971
MGIiMGI:2685307 H1fx

Phylogenomic databases

eggNOGiKOG4012 Eukaryota
ENOG4112541 LUCA
GeneTreeiENSGT00730000111536
HOGENOMiHOG000112842
HOVERGENiHBG009035
KOiK11275
OMAiARKVAWF
OrthoDBiEOG091G167M
TreeFamiTF313664

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000044927 Expressed in 33 organ(s), highest expression level in meninx of telencephalon

Family and domain databases

CDDicd00073 H15, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005818 Histone_H1/H5_H15
IPR005819 Histone_H5
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00538 Linker_histone, 1 hit
PRINTSiPR00624 HISTONEH5
SMARTiView protein in SMART
SM00526 H15, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS51504 H15, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiQ80ZM5_MOUSE
AccessioniPrimary (citable) accession number: Q80ZM5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 2003
Last sequence update: June 1, 2003
Last modified: September 12, 2018
This is version 139 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again