UniProtKB - Q80ZD9 (AMGO2_MOUSE)
Protein
Amphoterin-induced protein 2
Gene
Amigo2
Organism
Mus musculus (Mouse)
Status
Functioni
Required for depolarization-dependent survival of cultured cerebellar granule neurons. May mediate homophilic as well as heterophilic cell-cell interaction with AMIGO1 or AMIGO3. May contribute to signal transduction through its intracellular domain (By similarity).By similarity
GO - Biological processi
- brain development Source: GO_Central
- cell adhesion Source: MGI
- heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules Source: UniProtKB
- homophilic cell adhesion via plasma membrane adhesion molecules Source: UniProtKB
- negative regulation of neuron apoptotic process Source: MGI
- negative regulation of programmed cell death Source: UniProtKB
- positive regulation of synapse assembly Source: MGI
Keywordsi
Biological process | Cell adhesion |
Names & Taxonomyi
Protein namesi | Recommended name: Amphoterin-induced protein 2Alternative name(s): AMIGO-2 Alivin-1 |
Gene namesi | |
Organismi | Mus musculus (Mouse) |
Taxonomic identifieri | 10090 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus |
Proteomesi |
|
Organism-specific databases
MGIi | MGI:2145995, Amigo2 |
Subcellular locationi
Nucleus
- Nucleus By similarity
Plasma membrane
- Cell membrane By similarity; Single-pass type I membrane protein By similarity
Note: Associated with nucleus as well as plasma membrane. Restricted to somata of cerebellar as well as hippocampal neurons (By similarity).By similarity
Nucleus
- nucleus Source: MGI
Plasma Membrane
- plasma membrane Source: MGI
Other locations
- integral component of membrane Source: MGI
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Topological domaini | 39 – 397 | ExtracellularSequence analysisAdd BLAST | 359 | |
Transmembranei | 398 – 418 | HelicalSequence analysisAdd BLAST | 21 | |
Topological domaini | 419 – 519 | CytoplasmicSequence analysisAdd BLAST | 101 |
Keywords - Cellular componenti
Cell membrane, Membrane, NucleusPTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 38 | Sequence analysisAdd BLAST | 38 | |
ChainiPRO_0000014510 | 39 – 519 | Amphoterin-induced protein 2Sequence analysisAdd BLAST | 481 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Disulfide bondi | 40 ↔ 46 | PROSITE-ProRule annotation | ||
Disulfide bondi | 44 ↔ 53 | PROSITE-ProRule annotation | ||
Glycosylationi | 57 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 103 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 231 ↔ 259 | PROSITE-ProRule annotation | ||
Disulfide bondi | 233 ↔ 281 | PROSITE-ProRule annotation | ||
Glycosylationi | 280 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 287 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Disulfide bondi | 309 ↔ 362 | PROSITE-ProRule annotation | ||
Glycosylationi | 344 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 372 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 380 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 383 | N-linked (GlcNAc...) asparagineSequence analysis | 1 | |
Glycosylationi | 387 | N-linked (GlcNAc...) asparagineSequence analysis | 1 |
Keywords - PTMi
Disulfide bond, GlycoproteinProteomic databases
MaxQBi | Q80ZD9 |
PaxDbi | Q80ZD9 |
PRIDEi | Q80ZD9 |
ProteomicsDBi | 296027 |
PTM databases
GlyGeni | Q80ZD9, 9 sites |
iPTMneti | Q80ZD9 |
PhosphoSitePlusi | Q80ZD9 |
Expressioni
Tissue specificityi
Highest level in cerebellum, retina, liver, and lung. Lower levels in cerebrum, kidney, small intestine, spleen and testis.1 Publication
Gene expression databases
Bgeei | ENSMUSG00000048218, Expressed in metanephric ureteric bud and 177 other tissues |
ExpressionAtlasi | Q80ZD9, baseline and differential |
Genevisiblei | Q80ZD9, MM |
Interactioni
Subunit structurei
Binds itself as well as AMIGO1 and AMIGO3.
By similarityProtein-protein interaction databases
STRINGi | 10090.ENSMUSP00000059913 |
Miscellaneous databases
RNActi | Q80ZD9, protein |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 39 – 67 | LRRNTAdd BLAST | 29 | |
Repeati | 68 – 89 | LRR 1Add BLAST | 22 | |
Repeati | 93 – 114 | LRR 2Add BLAST | 22 | |
Repeati | 117 – 138 | LRR 3Add BLAST | 22 | |
Repeati | 141 – 162 | LRR 4Add BLAST | 22 | |
Repeati | 165 – 186 | LRR 5Add BLAST | 22 | |
Repeati | 192 – 213 | LRR 6Add BLAST | 22 | |
Domaini | 227 – 283 | LRRCTAdd BLAST | 57 | |
Domaini | 288 – 378 | Ig-like C2-typeSequence analysisAdd BLAST | 91 |
Sequence similaritiesi
Keywords - Domaini
Immunoglobulin domain, Leucine-rich repeat, Repeat, Signal, Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | ENOG502R009, Eukaryota |
GeneTreei | ENSGT00950000183146 |
HOGENOMi | CLU_030478_0_0_1 |
InParanoidi | Q80ZD9 |
OMAi | SCIAMNR |
OrthoDBi | 496131at2759 |
PhylomeDBi | Q80ZD9 |
TreeFami | TF326838 |
Family and domain databases
Gene3Di | 2.60.40.10, 1 hit 3.80.10.10, 1 hit |
InterProi | View protein in InterPro IPR031283, AMIGO IPR031286, AMIGO2 IPR000483, Cys-rich_flank_reg_C IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR003598, Ig_sub2 IPR013151, Immunoglobulin IPR001611, Leu-rich_rpt IPR003591, Leu-rich_rpt_typical-subtyp IPR032675, LRR_dom_sf |
PANTHERi | PTHR24368, PTHR24368, 1 hit PTHR24368:SF209, PTHR24368:SF209, 1 hit |
Pfami | View protein in Pfam PF00047, ig, 1 hit PF13855, LRR_8, 1 hit |
SMARTi | View protein in SMART SM00409, IG, 1 hit SM00408, IGc2, 1 hit SM00369, LRR_TYP, 5 hits SM00082, LRRCT, 1 hit |
SUPFAMi | SSF48726, SSF48726, 1 hit |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 1 hit PS51450, LRR, 6 hits |
i Sequence
Sequence statusi: Complete.
: The displayed sequence is further processed into a mature form. Sequence processingi
Q80ZD9-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSLRFHTLPT LPRAVKPGCR ELLCLLVIAV MVSPSASGMC PTACICATDI
60 70 80 90 100
VSCTNKNLSK VPGNLFRLIK RLDLSYNRIG LLDADWIPVS FVKLSTLILR
110 120 130 140 150
HNNITSISTG SFSTTPNLKC LDLSSNRLKS VKSATFQELK ALEVLLLYNN
160 170 180 190 200
HISYLDPAAF GGLSHLQKLY LSGNFLTQFP MDLYTGRFKL ADLTFLDVSY
210 220 230 240 250
NRIPSIPMHH INLVPGRQLR GIYLHGNPFV CDCSLYSLLI FWYRRHFSSV
260 270 280 290 300
MDFKNDYTCR LWSDSRHSHQ LQLLQESFLN CSYSVINGSF HALGFIHEAQ
310 320 330 340 350
VGERAIVHCD SKTGNGNTDF IWVGPDNRLL EPDKDMGNFR VFYNGSLVIE
360 370 380 390 400
NPGFEDAGVY SCIAMNRQRL LNETVDIMIN VSNFTINRSH AHEAFNTAFT
410 420 430 440 450
TLAACVASIV LVLLYLYLTP CPCKCKAKRQ KNTLSQSSAH SSILSPGPTG
460 470 480 490 500
DASADDRKAG KRVVFLEPLK DTAAGQNGKV KLFPSETVIA EGILKSTRAK
510
SDSDSVNSVF SDTPFVAST
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY237006 mRNA Translation: AAO48947.1 AB078880 mRNA Translation: BAC81187.1 |
CCDSi | CCDS27780.1 |
RefSeqi | NP_001158035.1, NM_001164563.1 NP_001158074.1, NM_001164602.1 NP_835215.1, NM_178114.4 |
Genome annotation databases
Ensembli | ENSMUST00000053106; ENSMUSP00000059913; ENSMUSG00000048218 ENSMUST00000229890; ENSMUSP00000155019; ENSMUSG00000048218 |
GeneIDi | 105827 |
KEGGi | mmu:105827 |
UCSCi | uc007xks.2, mouse |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AY237006 mRNA Translation: AAO48947.1 AB078880 mRNA Translation: BAC81187.1 |
CCDSi | CCDS27780.1 |
RefSeqi | NP_001158035.1, NM_001164563.1 NP_001158074.1, NM_001164602.1 NP_835215.1, NM_178114.4 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 10090.ENSMUSP00000059913 |
PTM databases
GlyGeni | Q80ZD9, 9 sites |
iPTMneti | Q80ZD9 |
PhosphoSitePlusi | Q80ZD9 |
Proteomic databases
MaxQBi | Q80ZD9 |
PaxDbi | Q80ZD9 |
PRIDEi | Q80ZD9 |
ProteomicsDBi | 296027 |
Protocols and materials databases
Antibodypediai | 13397, 235 antibodies |
Genome annotation databases
Ensembli | ENSMUST00000053106; ENSMUSP00000059913; ENSMUSG00000048218 ENSMUST00000229890; ENSMUSP00000155019; ENSMUSG00000048218 |
GeneIDi | 105827 |
KEGGi | mmu:105827 |
UCSCi | uc007xks.2, mouse |
Organism-specific databases
CTDi | 347902 |
MGIi | MGI:2145995, Amigo2 |
Phylogenomic databases
eggNOGi | ENOG502R009, Eukaryota |
GeneTreei | ENSGT00950000183146 |
HOGENOMi | CLU_030478_0_0_1 |
InParanoidi | Q80ZD9 |
OMAi | SCIAMNR |
OrthoDBi | 496131at2759 |
PhylomeDBi | Q80ZD9 |
TreeFami | TF326838 |
Miscellaneous databases
BioGRID-ORCSi | 105827, 0 hits in 52 CRISPR screens |
ChiTaRSi | Amigo2, mouse |
PROi | PR:Q80ZD9 |
RNActi | Q80ZD9, protein |
SOURCEi | Search... |
Gene expression databases
Bgeei | ENSMUSG00000048218, Expressed in metanephric ureteric bud and 177 other tissues |
ExpressionAtlasi | Q80ZD9, baseline and differential |
Genevisiblei | Q80ZD9, MM |
Family and domain databases
Gene3Di | 2.60.40.10, 1 hit 3.80.10.10, 1 hit |
InterProi | View protein in InterPro IPR031283, AMIGO IPR031286, AMIGO2 IPR000483, Cys-rich_flank_reg_C IPR007110, Ig-like_dom IPR036179, Ig-like_dom_sf IPR013783, Ig-like_fold IPR003599, Ig_sub IPR003598, Ig_sub2 IPR013151, Immunoglobulin IPR001611, Leu-rich_rpt IPR003591, Leu-rich_rpt_typical-subtyp IPR032675, LRR_dom_sf |
PANTHERi | PTHR24368, PTHR24368, 1 hit PTHR24368:SF209, PTHR24368:SF209, 1 hit |
Pfami | View protein in Pfam PF00047, ig, 1 hit PF13855, LRR_8, 1 hit |
SMARTi | View protein in SMART SM00409, IG, 1 hit SM00408, IGc2, 1 hit SM00369, LRR_TYP, 5 hits SM00082, LRRCT, 1 hit |
SUPFAMi | SSF48726, SSF48726, 1 hit |
PROSITEi | View protein in PROSITE PS50835, IG_LIKE, 1 hit PS51450, LRR, 6 hits |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | AMGO2_MOUSE | |
Accessioni | Q80ZD9Primary (citable) accession number: Q80ZD9 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | June 21, 2005 |
Last sequence update: | June 1, 2003 | |
Last modified: | April 7, 2021 | |
This is version 146 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- MGD cross-references
Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot - SIMILARITY comments
Index of protein domains and families