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Entry version 128 (26 Feb 2020)
Sequence version 2 (13 Apr 2004)
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Protein

SH3 domain and tetratricopeptide repeat-containing protein 2

Gene

Sh3tc2

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
SH3 domain and tetratricopeptide repeat-containing protein 2
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Sh3tc2
Synonyms:Kiaa1985
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 18

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...
MGIi
MGI:2444417 Sh3tc2

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001063571 – 1289SH3 domain and tetratricopeptide repeat-containing protein 2Add BLAST1289

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
Q80VA5

PRoteomics IDEntifications database

More...
PRIDEi
Q80VA5

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
Q80VA5

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...
PhosphoSitePlusi
Q80VA5

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSMUSG00000045629 Expressed in placenta labyrinth and 92 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
Q80VA5 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
Q80VA5 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10090.ENSMUSP00000055094

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
Q80VA5 protein

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini176 – 239SH3 1PROSITE-ProRule annotationAdd BLAST64
Domaini267 – 330SH3 2PROSITE-ProRule annotationAdd BLAST64
<p>This subsection of the 'Family and Domains' section indicates the positions and types of repeated sequence motifs or repeated domains within the protein.<p><a href='/help/repeat' target='_top'>More...</a></p>Repeati529 – 562TPR 1Add BLAST34
Repeati758 – 791TPR 2Add BLAST34
Repeati837 – 870TPR 3Add BLAST34
Repeati1002 – 1038TPR 4Add BLAST37
Repeati1085 – 1119TPR 5Add BLAST35
Repeati1120 – 1153TPR 6Add BLAST34
Repeati1167 – 1200TPR 7Add BLAST34
Repeati1211 – 1245TPR 8Add BLAST35

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Repeat, SH3 domain, TPR repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IFSQ Eukaryota
ENOG410Y8HX LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00530000063812

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_004832_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
Q80VA5

Identification of Orthologs from Complete Genome Data

More...
OMAi
ACEEQAD

Database of Orthologous Groups

More...
OrthoDBi
39940at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
Q80VA5

TreeFam database of animal gene trees

More...
TreeFami
TF333167

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.10, 4 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
IPR042772 SH3TC1/SH3TC2
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat

The PANTHER Classification System

More...
PANTHERi
PTHR22647 PTHR22647, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00018 SH3_1, 1 hit
PF07653 SH3_2, 1 hit
PF13181 TPR_8, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00326 SH3, 2 hits
SM00028 TPR, 6 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48452 SSF48452, 4 hits
SSF50044 SSF50044, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50002 SH3, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (4+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 4 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 4 described isoforms and 2 potential isoforms that are computationally mapped.Show allAlign All

Isoform 1 (identifier: Q80VA5-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MGGCFCIPGE RSLPWGPGKE GSSKDPPGLA EDTSSLENKR KCFLPQNMTQ
60 70 80 90 100
DLVLSFCVKS RSRRCVNAAL QEAARRRLWA LENEAQEVHA LFKDLSARLV
110 120 130 140 150
SVQSQKDQFL ITFKTLEEIW KFSTYLNLGY VSICLEHLFF DHTYWLNSRL
160 170 180 190 200
VDDTEIQVSV DDNHLENIYL GLLLQEGHFF CRAVCSVAQP ADKEGEYLTL
210 220 230 240 250
CKNELISVLS GGESECEAMS LVTGQRGLVP MSALEPLPVP FHQWFLKNHP
260 270 280 290 300
GICGLPRKRD WTGSGQIGRG RCKALMDYEQ EERDELCFLQ GESIDVIGFV
310 320 330 340 350
IPGLQWFIGK SVSSGEVGFV PTRSIDLDSC SPMSKNSAFF SDEERSSLWS
360 370 380 390 400
PGSERKAECS GFLCSLAHTD ITSIYRLSEF EAIQNLQNDL SASQPEGFRE
410 420 430 440 450
ARSGGTWMER QTIGSRRSSG SGDSSPEEDE LISASSDSYH LPEPEDLDDP
460 470 480 490 500
ELFMDLSTSL EEDDVEHFAP ILAFLDHEGY TDHFKSLYDF SFSFLTSSFY
510 520 530 540 550
SFSEEDELVA YLETSRKWAK MSHMTWAHAR LCFLLGRLSI RKTKLSQARV
560 570 580 590 600
YFEEAIRVLD GAFEDLSLVA ALYINLAAIY LRQRLRHKGP TLLEKAGALL
610 620 630 640 650
ACLPDHEFST KNELDVVTYV LRQGIVVGSG LLEARSCFLA IRLLLSLGRH
660 670 680 690 700
EEVVPFAERL QLLSGHPPAS EATATMLSSL YDKKYLPHLA VASVQKRGPQ
710 720 730 740 750
SARGMSLSIW QAYLVLQNAT KILGVPSSNW CEVSALACPT LRQALAACEE
760 770 780 790 800
LSDQDIQRTL CLILSKMYLQ HQSPDGSVHY LSQAHVLGKL LGEEEAFESS
810 820 830 840 850
LCLAWAYLLG RQTEKALEIL EPLLCSLRET ECVTQRGVVH NLLGLAFEDE
860 870 880 890 900
GRTSRAAKSY LRALIRAREM GNIRNQAVSM ANLGHLTLKS CMQQSARGYL
910 920 930 940 950
LQAVRLYSEL QASKETDMEL VQVLLWLGQA SVSGHQLVHS RLCYEMALLF
960 970 980 990 1000
GLRHQHLSSQ LQVTKSLCHF YSSVSPNPDA CITYHEHWLA LAQQLRDREM
1010 1020 1030 1040 1050
EGQLLESLGQ LYRNLNTSRS LRRSLACIKE SLRIFVDLGE RDKAAEAWLG
1060 1070 1080 1090 1100
AGRLHYLMQE DELVELYLQE AIQTALRSEE PSLALKLYEE AGDVFFNGTR
1110 1120 1130 1140 1150
HRHRAVEYYR AGAVPLARRM KALRTELRIF NKLTELQISL EGYEKALEFA
1160 1170 1180 1190 1200
TLAARLSVLT GDQKQELVAF HRLATVYFSL NMYEMAEDCY LKTLSLCPPW
1210 1220 1230 1240 1250
LQSPKEALYY AKVYCRLGRL TFYQLKDAHD ATEYFLLALA AAVLMGDEEL
1260 1270 1280
QNTIKNRLDS ICQSPLWHSN PFGCSSERAR WLSGGSLAL
Length:1,289
Mass (Da):145,144
Last modified:April 13, 2004 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE96C52181ADD9936
GO
Isoform 2 (identifier: Q80VA5-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-407: Missing.
     1020-1289: Missing.

Show »
Length:612
Mass (Da):68,751
Checksum:iAE7EC8945EDAA20E
GO
Isoform 3 (identifier: Q80VA5-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     130-156: YVSICLEHLFFDHTYWLNSRLVDDTEI → MPWVGGGEHLSPSSRLVEPDTGELVCL
     157-1289: Missing.

Show »
Length:156
Mass (Da):17,401
Checksum:i08A9BA72A7A8B9BE
GO
Isoform 4 (identifier: Q80VA5-4) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     959-1001: SQLQVTKSLC...AQQLRDREME → TRCPRTPMRA...WSPLGSFIGT
     1002-1289: Missing.

Show »
Length:1,001
Mass (Da):112,135
Checksum:i0A35D21557144991
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q3UPD8Q3UPD8_MOUSE
SH3 domain and tetratricopeptide re...
Sh3tc2
1,228Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
A0A494BAH3A0A494BAH3_MOUSE
SH3 domain and tetratricopeptide re...
Sh3tc2
995Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_0098871 – 407Missing in isoform 2. 1 PublicationAdd BLAST407
Alternative sequenceiVSP_009888130 – 156YVSIC…DDTEI → MPWVGGGEHLSPSSRLVEPD TGELVCL in isoform 3. 1 PublicationAdd BLAST27
Alternative sequenceiVSP_009889157 – 1289Missing in isoform 3. 1 PublicationAdd BLAST1133
Alternative sequenceiVSP_009890959 – 1001SQLQV…DREME → TRCPRTPMRALPIMNTGWPW LSNSGIGRWRDSYWSPLGSF IGT in isoform 4. 1 PublicationAdd BLAST43
Alternative sequenceiVSP_0098911002 – 1289Missing in isoform 4. 1 PublicationAdd BLAST288
Alternative sequenceiVSP_0098921020 – 1289Missing in isoform 2. 1 PublicationAdd BLAST270

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AK031388 mRNA Translation: BAC27379.1
AK048066 mRNA Translation: BAC33233.1
AK052534 mRNA Translation: BAC35030.1
BC037000 mRNA No translation available.
BC049856 mRNA Translation: AAH49856.1

The Consensus CDS (CCDS) project

More...
CCDSi
CCDS37840.1 [Q80VA5-1]

NCBI Reference Sequences

More...
RefSeqi
NP_766216.2, NM_172628.2 [Q80VA5-1]

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSMUST00000051720; ENSMUSP00000055094; ENSMUSG00000045629 [Q80VA5-1]
ENSMUST00000235652; ENSMUSP00000158542; ENSMUSG00000045629 [Q80VA5-4]

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
225608

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
mmu:225608

UCSC genome browser

More...
UCSCi
uc008fcu.1 mouse [Q80VA5-3]
uc008fcv.1 mouse [Q80VA5-1]
uc008fcw.1 mouse [Q80VA5-2]

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK031388 mRNA Translation: BAC27379.1
AK048066 mRNA Translation: BAC33233.1
AK052534 mRNA Translation: BAC35030.1
BC037000 mRNA No translation available.
BC049856 mRNA Translation: AAH49856.1
CCDSiCCDS37840.1 [Q80VA5-1]
RefSeqiNP_766216.2, NM_172628.2 [Q80VA5-1]

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000055094

PTM databases

iPTMnetiQ80VA5
PhosphoSitePlusiQ80VA5

Proteomic databases

PaxDbiQ80VA5
PRIDEiQ80VA5

Genome annotation databases

EnsembliENSMUST00000051720; ENSMUSP00000055094; ENSMUSG00000045629 [Q80VA5-1]
ENSMUST00000235652; ENSMUSP00000158542; ENSMUSG00000045629 [Q80VA5-4]
GeneIDi225608
KEGGimmu:225608
UCSCiuc008fcu.1 mouse [Q80VA5-3]
uc008fcv.1 mouse [Q80VA5-1]
uc008fcw.1 mouse [Q80VA5-2]

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
79628
MGIiMGI:2444417 Sh3tc2

Rodent Unidentified Gene-Encoded large proteins database

More...
Rougei
Search...

Phylogenomic databases

eggNOGiENOG410IFSQ Eukaryota
ENOG410Y8HX LUCA
GeneTreeiENSGT00530000063812
HOGENOMiCLU_004832_0_0_1
InParanoidiQ80VA5
OMAiACEEQAD
OrthoDBi39940at2759
PhylomeDBiQ80VA5
TreeFamiTF333167

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
Sh3tc2 mouse

Protein Ontology

More...
PROi
PR:Q80VA5
RNActiQ80VA5 protein

The Stanford Online Universal Resource for Clones and ESTs

More...
SOURCEi
Search...

Gene expression databases

BgeeiENSMUSG00000045629 Expressed in placenta labyrinth and 92 other tissues
ExpressionAtlasiQ80VA5 baseline and differential
GenevisibleiQ80VA5 MM

Family and domain databases

Gene3Di1.25.40.10, 4 hits
InterProiView protein in InterPro
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
IPR042772 SH3TC1/SH3TC2
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
PANTHERiPTHR22647 PTHR22647, 1 hit
PfamiView protein in Pfam
PF00018 SH3_1, 1 hit
PF07653 SH3_2, 1 hit
PF13181 TPR_8, 1 hit
SMARTiView protein in SMART
SM00326 SH3, 2 hits
SM00028 TPR, 6 hits
SUPFAMiSSF48452 SSF48452, 4 hits
SSF50044 SSF50044, 2 hits
PROSITEiView protein in PROSITE
PS50002 SH3, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiS3TC2_MOUSE
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q80VA5
Secondary accession number(s): Q8BWH2, Q8BXB8, Q8C0G6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: April 13, 2004
Last modified: February 26, 2020
This is version 128 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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